RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 ICA1Q05084 483 aa19.13■□□□□ 0.65
COX6A1-203ENST00000550009 WDR78Q5VTH9 848 aa19.13■□□□□ 0.65
COX6A1-203ENST00000550009 PLEKHH3Q7Z736 793 aa19.13■□□□□ 0.65
COX6A1-203ENST00000550009 APPBP2Q92624 585 aa19.13■□□□□ 0.65
COX6A1-203ENST00000550009 NUDT12Q9BQG2 462 aa19.13■□□□□ 0.65
COX6A1-203ENST00000550009 CRISPLD2Q9H0B8 497 aa19.13■□□□□ 0.65
COX6A1-203ENST00000550009 SWAP70Q9UH65 585 aa19.13■□□□□ 0.65
COX6A1-203ENST00000550009 RABGAP1Q9Y3P9 1069 aa19.13■□□□□ 0.65
COX6A1-203ENST00000550009 TRIOBPQ9H2D6 2365 aa19.12■□□□□ 0.65
COX6A1-203ENST00000550009 MINDY4BA8MYZ0 360 aa19.12■□□□□ 0.65
COX6A1-203ENST00000550009 GPAA1O43292 621 aa19.12■□□□□ 0.65
COX6A1-203ENST00000550009 EEF2P13639 858 aaKnown RBP19.12■□□□□ 0.65
COX6A1-203ENST00000550009 CCND3P30281 292 aaPredicted RBP19.12■□□□□ 0.65
COX6A1-203ENST00000550009 ATP2B2Q01814 1243 aa19.12■□□□□ 0.65
COX6A1-203ENST00000550009 ZSCAN25Q6NSZ9 544 aa19.12■□□□□ 0.65
COX6A1-203ENST00000550009 CCDC129Q6ZRS4 1044 aa19.12■□□□□ 0.65
COX6A1-203ENST00000550009 NPLOC4Q8TAT6 608 aa19.12■□□□□ 0.65
COX6A1-203ENST00000550009 DPF3Q92784 378 aa19.12■□□□□ 0.65
COX6A1-203ENST00000550009 TANGO6Q9C0B7 1094 aa19.12■□□□□ 0.65
COX6A1-203ENST00000550009 FBXO28Q9NVF7 368 aa19.12■□□□□ 0.65
COX6A1-203ENST00000550009 COLQQ9Y215 455 aaPredicted RBP19.12■□□□□ 0.65
COX6A1-203ENST00000550009 LAMA2P24043 3122 aaKnown RBP19.11■□□□□ 0.65
COX6A1-203ENST00000550009 FOXP2O15409 715 aa19.11■□□□□ 0.65
COX6A1-203ENST00000550009 PRKAR2AP13861 404 aaKnown RBP19.11■□□□□ 0.65
COX6A1-203ENST00000550009 RASA1P20936 1047 aa19.11■□□□□ 0.65
COX6A1-203ENST00000550009 MAPK4P31152 587 aa19.11■□□□□ 0.65
COX6A1-203ENST00000550009 CACNB2Q08289 660 aaPredicted RBP19.11■□□□□ 0.65
COX6A1-203ENST00000550009 MAP3K21Q5TCX8 1036 aa19.11■□□□□ 0.65
COX6A1-203ENST00000550009 ANKRD45Q5TZF3 282 aa19.11■□□□□ 0.65
COX6A1-203ENST00000550009 NKX2-3Q8TAU0 364 aa19.11■□□□□ 0.65
COX6A1-203ENST00000550009 ATG4CQ96DT6 458 aa19.11■□□□□ 0.65
COX6A1-203ENST00000550009 GPATCH3Q96I76 525 aa19.11■□□□□ 0.65
COX6A1-203ENST00000550009 PAWRQ96IZ0 340 aaKnown RBP19.11■□□□□ 0.65
COX6A1-203ENST00000550009 PRDM1O75626 825 aa19.1■□□□□ 0.65
COX6A1-203ENST00000550009 HABP4Q5JVS0 413 aaKnown RBP19.1■□□□□ 0.65
COX6A1-203ENST00000550009 LBX2Q6XYB7 198 aa19.1■□□□□ 0.65
COX6A1-203ENST00000550009 NUP88Q99567 741 aaPredicted RBP19.1■□□□□ 0.65
COX6A1-203ENST00000550009 MOV10L1Q9BXT6 1211 aaKnown RBP19.1■□□□□ 0.65
COX6A1-203ENST00000550009 VCPKMTQ9H867 229 aa19.1■□□□□ 0.65
COX6A1-203ENST00000550009 TMX2Q9Y320 296 aa19.1■□□□□ 0.65
COX6A1-203ENST00000550009 TACC3Q9Y6A5 838 aa19.1■□□□□ 0.65
COX6A1-203ENST00000550009 MCM3APO60318 1980 aa19.1■□□□□ 0.65
COX6A1-203ENST00000550009 ZNF236Q9UL36 1845 aa19.09■□□□□ 0.65
COX6A1-203ENST00000550009 TTC41PQ6P2S7 1318 aa19.09■□□□□ 0.65
COX6A1-203ENST00000550009 RPTORQ8N122 1335 aa19.09■□□□□ 0.65
COX6A1-203ENST00000550009 MX1P20591 662 aa19.09■□□□□ 0.65
COX6A1-203ENST00000550009 PTPREP23469 700 aa19.09■□□□□ 0.65
COX6A1-203ENST00000550009 SBK1Q52WX2 424 aa19.09■□□□□ 0.65
COX6A1-203ENST00000550009 CCAR1Q8IX12 1150 aaKnown RBP19.09■□□□□ 0.65
COX6A1-203ENST00000550009 INCENPQ9NQS7 918 aa19.09■□□□□ 0.65
COX6A1-203ENST00000550009 ZKSCAN1P17029 563 aaPredicted RBP19.08■□□□□ 0.64
COX6A1-203ENST00000550009 DSG3P32926 999 aa19.08■□□□□ 0.64
COX6A1-203ENST00000550009 MAP2K5Q13163 448 aa19.08■□□□□ 0.64
COX6A1-203ENST00000550009 COG2Q14746 738 aa19.08■□□□□ 0.64
COX6A1-203ENST00000550009 GTF3C2Q8WUA4 911 aaPredicted RBP19.08■□□□□ 0.64
COX6A1-203ENST00000550009 SOCS4Q8WXH5 440 aa19.08■□□□□ 0.64
COX6A1-203ENST00000550009 FSD1Q9BTV5 496 aa19.08■□□□□ 0.64
COX6A1-203ENST00000550009 ARHGEF10LQ9HCE6 1279 aa19.08■□□□□ 0.64
COX6A1-203ENST00000550009 HMX1Q9NP08 348 aaPredicted RBP19.08■□□□□ 0.64
COX6A1-203ENST00000550009 RAD21O60216 631 aa19.07■□□□□ 0.64
COX6A1-203ENST00000550009 FLOT1O75955 427 aa19.07■□□□□ 0.64
COX6A1-203ENST00000550009 XRCC5P13010 732 aaKnown RBP19.07■□□□□ 0.64
COX6A1-203ENST00000550009 RGS2P41220 211 aa19.07■□□□□ 0.64
COX6A1-203ENST00000550009 ZMYM1Q5SVZ6 1142 aa19.07■□□□□ 0.64
COX6A1-203ENST00000550009 TRPV1Q8NER1 839 aa19.07■□□□□ 0.64
COX6A1-203ENST00000550009 CHMP4CQ96CF2 233 aa19.07■□□□□ 0.64
COX6A1-203ENST00000550009 CCDC17Q96LX7 622 aa19.07■□□□□ 0.64
COX6A1-203ENST00000550009 APBA2Q99767 749 aa19.07■□□□□ 0.64
COX6A1-203ENST00000550009 ARPP21Q9UBL0 812 aaPredicted RBP19.07■□□□□ 0.64
COX6A1-203ENST00000550009 LAMA3Q16787 3333 aa19.07■□□□□ 0.64
COX6A1-203ENST00000550009 ROBO3Q96MS0 1386 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 COBLO75128 1261 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 GLRX3O76003 335 aaKnown RBP19.06■□□□□ 0.64
COX6A1-203ENST00000550009 IGHDP01880 384 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 APPP05067 770 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 ERCC3P19447 782 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 GRB14Q14449 540 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 PLS1Q14651 629 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 TMEM132BQ14DG7 1078 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 FAM83BQ5T0W9 1011 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 VPS53Q5VIR6 699 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 CHRDL2Q6WN34 429 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 IFNL3Q8IZI9 196 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 EXOC6Q8TAG9 804 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 DDRGK1Q96HY6 314 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 SPATC1LQ9H0A9 340 aa19.06■□□□□ 0.64
COX6A1-203ENST00000550009 CWC22Q9HCG8 908 aaKnown RBP19.06■□□□□ 0.64
COX6A1-203ENST00000550009 PATL2C9JE40 543 aaKnown RBP19.05■□□□□ 0.64
COX6A1-203ENST00000550009 CYP2C19P33261 490 aa19.05■□□□□ 0.64
COX6A1-203ENST00000550009 TDO2P48775 406 aa19.05■□□□□ 0.64
COX6A1-203ENST00000550009 LHX8Q68G74 356 aa19.05■□□□□ 0.64
COX6A1-203ENST00000550009 AMOTL1Q8IY63 956 aa19.05■□□□□ 0.64
COX6A1-203ENST00000550009 IGKV6D-41A0A0C4DH26 115 aa19.04■□□□□ 0.64
COX6A1-203ENST00000550009 SLC15A5A6NIM6 579 aa19.04■□□□□ 0.64
COX6A1-203ENST00000550009 ZFYP08048 801 aaPredicted RBP19.04■□□□□ 0.64
COX6A1-203ENST00000550009 ADORA2AP29274 412 aa19.04■□□□□ 0.64
COX6A1-203ENST00000550009 PDE1AP54750 535 aa19.04■□□□□ 0.64
COX6A1-203ENST00000550009 CCNA1P78396 465 aa19.04■□□□□ 0.64
COX6A1-203ENST00000550009 HDAC1Q13547 482 aaPredicted RBP19.04■□□□□ 0.64
COX6A1-203ENST00000550009 FAM47AQ5JRC9 791 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms