RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 PARP1P09874 1014 aaKnown RBP16.46■□□□□ 0.23
CACNB3-211ENST00000549226 SLURP2P0DP57 97 aa16.46■□□□□ 0.23
CACNB3-211ENST00000549226 GJB2P29033 226 aa16.46■□□□□ 0.23
CACNB3-211ENST00000549226 RRP1BQ14684 758 aaKnown RBP16.46■□□□□ 0.23
CACNB3-211ENST00000549226 TMTC3Q6ZXV5 915 aa16.46■□□□□ 0.23
CACNB3-211ENST00000549226 FAM184AQ8NB25 1140 aa16.46■□□□□ 0.23
CACNB3-211ENST00000549226 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.46■□□□□ 0.23
CACNB3-211ENST00000549226 MYL10Q9BUA6 226 aa16.46■□□□□ 0.23
CACNB3-211ENST00000549226 AS3MTQ9HBK9 375 aa16.46■□□□□ 0.23
CACNB3-211ENST00000549226 NCOA5Q9HCD5 579 aaKnown RBP16.46■□□□□ 0.23
CACNB3-211ENST00000549226 FAM217BQ9NTX9 383 aaPredicted RBP16.46■□□□□ 0.23
CACNB3-211ENST00000549226 SCAF8Q9UPN6 1271 aaKnown RBP16.46■□□□□ 0.23
CACNB3-211ENST00000549226 MYH8P13535 1937 aa16.46■□□□□ 0.23
CACNB3-211ENST00000549226 SSC5DA1L4H1 1573 aa16.46■□□□□ 0.23
CACNB3-211ENST00000549226 USP17L5A8MUK1 530 aa16.45■□□□□ 0.22
CACNB3-211ENST00000549226 PDHBP11177 359 aa16.45■□□□□ 0.22
CACNB3-211ENST00000549226 CDC27P30260 824 aa16.45■□□□□ 0.22
CACNB3-211ENST00000549226 ADD1P35611 737 aaKnown RBP16.45■□□□□ 0.22
CACNB3-211ENST00000549226 ATP2B2Q01814 1243 aa16.45■□□□□ 0.22
CACNB3-211ENST00000549226 MAP3K11Q16584 847 aa16.45■□□□□ 0.22
CACNB3-211ENST00000549226 SPRYD3Q8NCJ5 442 aa16.45■□□□□ 0.22
CACNB3-211ENST00000549226 GMCL1Q96IK5 515 aa16.45■□□□□ 0.22
CACNB3-211ENST00000549226 RNF26Q9BY78 433 aaPredicted RBP16.45■□□□□ 0.22
CACNB3-211ENST00000549226 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
CACNB3-211ENST00000549226 TMX2Q9Y320 296 aa16.45■□□□□ 0.22
CACNB3-211ENST00000549226 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
CACNB3-211ENST00000549226 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
CACNB3-211ENST00000549226 CTDNEP1O95476 244 aa16.44■□□□□ 0.22
CACNB3-211ENST00000549226 RXRAP19793 462 aa16.44■□□□□ 0.22
CACNB3-211ENST00000549226 FKBP1BP68106 108 aa16.44■□□□□ 0.22
CACNB3-211ENST00000549226 MAP3K9P80192 1104 aa16.44■□□□□ 0.22
CACNB3-211ENST00000549226 AKAP17AQ02040 695 aaKnown RBP16.44■□□□□ 0.22
CACNB3-211ENST00000549226 SSRP1Q08945 709 aaKnown RBP16.44■□□□□ 0.22
CACNB3-211ENST00000549226 NTRK3Q16288 839 aa16.44■□□□□ 0.22
CACNB3-211ENST00000549226 ARMC9Q7Z3E5 817 aa16.44■□□□□ 0.22
CACNB3-211ENST00000549226 CCDC144CPQ8IYA2 1237 aa16.44■□□□□ 0.22
CACNB3-211ENST00000549226 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
CACNB3-211ENST00000549226 WDR18Q9BV38 432 aa16.44■□□□□ 0.22
CACNB3-211ENST00000549226 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
CACNB3-211ENST00000549226 CSADQ9Y600 493 aa16.44■□□□□ 0.22
CACNB3-211ENST00000549226 USP2O75604 605 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-211ENST00000549226 DEXIO95424 95 aa16.43■□□□□ 0.22
CACNB3-211ENST00000549226 USP14P54578 494 aa16.43■□□□□ 0.22
CACNB3-211ENST00000549226 PRAMEF18Q5VWM3 479 aa16.43■□□□□ 0.22
CACNB3-211ENST00000549226 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
CACNB3-211ENST00000549226 RAB11FIP4Q86YS3 637 aa16.43■□□□□ 0.22
CACNB3-211ENST00000549226 SIAH1Q8IUQ4 282 aa16.43■□□□□ 0.22
CACNB3-211ENST00000549226 FAM177A1Q8N128 213 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-211ENST00000549226 LPAR1Q92633 364 aa16.43■□□□□ 0.22
CACNB3-211ENST00000549226 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
CACNB3-211ENST00000549226 GLIS2Q9BZE0 524 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-211ENST00000549226 ORC3Q9UBD5 711 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-211ENST00000549226 MAD2L2Q9UI95 211 aa16.43■□□□□ 0.22
CACNB3-211ENST00000549226 F5H6K3 240 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 JAK2O60674 1132 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 INPP5BP32019 993 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 SLC1A4P43007 532 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 JAG1P78504 1218 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 KLRC3Q07444 240 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 ZNF543Q08ER8 600 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 CLEC10AQ8IUN9 316 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 ANKRD13AQ8IZ07 590 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 VCPKMTQ9H867 229 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 NMRK2Q9NPI5 230 aa16.42■□□□□ 0.22
CACNB3-211ENST00000549226 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
CACNB3-211ENST00000549226 PRPF3O43395 683 aaKnown RBP16.41■□□□□ 0.22
CACNB3-211ENST00000549226 XBP1P17861 261 aa16.41■□□□□ 0.22
CACNB3-211ENST00000549226 PTPRAP18433 802 aa16.41■□□□□ 0.22
CACNB3-211ENST00000549226 FUT2Q10981 343 aa16.41■□□□□ 0.22
CACNB3-211ENST00000549226 SHROOM1Q2M3G4 852 aaPredicted RBP16.41■□□□□ 0.22
CACNB3-211ENST00000549226 LARP1BQ659C4 914 aaKnown RBP16.41■□□□□ 0.22
CACNB3-211ENST00000549226 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
CACNB3-211ENST00000549226 RBM46Q8TBY0 533 aaKnown RBP16.41■□□□□ 0.22
CACNB3-211ENST00000549226 FEZ1Q99689 392 aa16.41■□□□□ 0.22
CACNB3-211ENST00000549226 SLC26A6Q9BXS9 759 aa16.41■□□□□ 0.22
CACNB3-211ENST00000549226 USP17L10C9JJH3 530 aa16.4■□□□□ 0.22
CACNB3-211ENST00000549226 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
CACNB3-211ENST00000549226 STX6O43752 255 aa16.4■□□□□ 0.22
CACNB3-211ENST00000549226 PLA2G6O60733 806 aa16.4■□□□□ 0.22
CACNB3-211ENST00000549226 NDUFB10O96000 172 aa16.4■□□□□ 0.22
CACNB3-211ENST00000549226 CCDC96Q2M329 555 aa16.4■□□□□ 0.22
CACNB3-211ENST00000549226 MAP1SQ66K74 1059 aaPredicted RBP16.4■□□□□ 0.22
CACNB3-211ENST00000549226 NBPF11Q86T75 865 aa16.4■□□□□ 0.22
CACNB3-211ENST00000549226 ZNF280CQ8ND82 737 aa16.4■□□□□ 0.22
CACNB3-211ENST00000549226 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
CACNB3-211ENST00000549226 CNTNAP5Q8WYK1 1306 aa16.4■□□□□ 0.22
CACNB3-211ENST00000549226 A0A1W2PRG0 241 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 C19orf81C9J6K1 198 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 hCG_1984214I3L0E3 225 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 PLEKHA8P1O95397 391 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 BMP3P12645 472 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 SYT1P21579 422 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 TRIM29Q14134 588 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 VGLL4Q14135 290 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 TTLL12Q14166 644 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-211ENST00000549226 USP17L2Q6R6M4 530 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-211ENST00000549226 SRBD1Q8N5C6 995 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms