RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 CCDC120Q96HB5 630 aa7.35□□□□□ -1.23
CCDC38-206ENST00000548771 KIRREL1Q96J84 757 aa7.35□□□□□ -1.23
CCDC38-206ENST00000548771 CCDC74BQ96LY2 380 aa7.35□□□□□ -1.23
CCDC38-206ENST00000548771 B8ZZF3 427 aa7.34□□□□□ -1.23
CCDC38-206ENST00000548771 LRRN2O75325 713 aa7.34□□□□□ -1.23
CCDC38-206ENST00000548771 ATE1O95260 518 aa7.34□□□□□ -1.23
CCDC38-206ENST00000548771 TSPAN15O95858 294 aa7.34□□□□□ -1.23
CCDC38-206ENST00000548771 KRT1P04264 644 aa7.34□□□□□ -1.23
CCDC38-206ENST00000548771 SNAP47Q5SQN1 464 aa7.34□□□□□ -1.23
CCDC38-206ENST00000548771 DIEXFQ68CQ4 756 aaKnown RBP7.34□□□□□ -1.23
CCDC38-206ENST00000548771 KRTAP17-1Q9BYP8 105 aa7.34□□□□□ -1.23
CCDC38-206ENST00000548771 TRIT1Q9H3H1 467 aaKnown RBP7.34□□□□□ -1.23
CCDC38-206ENST00000548771 KCNK12Q9HB15 430 aa7.34□□□□□ -1.23
CCDC38-206ENST00000548771 RBM47A0AV96 593 aaKnown RBP7.33□□□□□ -1.24
CCDC38-206ENST00000548771 SLC22A31A6NKX4 558 aa7.33□□□□□ -1.24
CCDC38-206ENST00000548771 HPXP02790 462 aa7.33□□□□□ -1.24
CCDC38-206ENST00000548771 C1QTNF9P0C862 333 aa7.33□□□□□ -1.24
CCDC38-206ENST00000548771 EIF4A3P38919 411 aaKnown RBP7.33□□□□□ -1.24
CCDC38-206ENST00000548771 KREMEN1Q96MU8 473 aa7.33□□□□□ -1.24
CCDC38-206ENST00000548771 BCL2L13Q9BXK5 485 aa7.33□□□□□ -1.24
CCDC38-206ENST00000548771 TMEM59LQ9UK28 342 aa7.33□□□□□ -1.24
CCDC38-206ENST00000548771 ZNF281Q9Y2X9 895 aa7.33□□□□□ -1.24
CCDC38-206ENST00000548771 RGS13O14921 159 aa7.32□□□□□ -1.24
CCDC38-206ENST00000548771 TTC6Q86TZ1 520 aa7.32□□□□□ -1.24
CCDC38-206ENST00000548771 CREG2Q8IUH2 290 aa7.32□□□□□ -1.24
CCDC38-206ENST00000548771 ZSCAN18Q8TBC5 510 aaPredicted RBP7.32□□□□□ -1.24
CCDC38-206ENST00000548771 ASPNQ9BXN1 380 aa7.32□□□□□ -1.24
CCDC38-206ENST00000548771 ADAMTS10Q9H324 1103 aa7.32□□□□□ -1.24
CCDC38-206ENST00000548771 SLAMF8Q9P0V8 285 aa7.32□□□□□ -1.24
CCDC38-206ENST00000548771 ADAMTS1Q9UHI8 967 aa7.32□□□□□ -1.24
CCDC38-206ENST00000548771 KCNH3Q9ULD8 1083 aa7.32□□□□□ -1.24
CCDC38-206ENST00000548771 CRKP46108 304 aa7.31□□□□□ -1.24
CCDC38-206ENST00000548771 ERVFC1P60507 584 aa7.31□□□□□ -1.24
CCDC38-206ENST00000548771 TMEM67Q5HYA8 995 aa7.31□□□□□ -1.24
CCDC38-206ENST00000548771 ANKLE2Q86XL3 938 aa7.31□□□□□ -1.24
CCDC38-206ENST00000548771 GIPC2Q8TF65 315 aa7.31□□□□□ -1.24
CCDC38-206ENST00000548771 EHMT1Q9H9B1 1298 aa7.31□□□□□ -1.24
CCDC38-206ENST00000548771 BRMS1Q9HCU9 246 aa7.31□□□□□ -1.24
CCDC38-206ENST00000548771 GPATCH2Q9NW75 528 aa7.31□□□□□ -1.24
CCDC38-206ENST00000548771 KLHL3Q9UH77 587 aa7.31□□□□□ -1.24
CCDC38-206ENST00000548771 SUPT16HQ9Y5B9 1047 aaKnown RBP7.31□□□□□ -1.24
CCDC38-206ENST00000548771 SHISA3A0PJX4 238 aa7.3□□□□□ -1.24
CCDC38-206ENST00000548771 UBOX5O94941 541 aa7.3□□□□□ -1.24
CCDC38-206ENST00000548771 ZNF326Q5BKZ1 582 aaKnown RBP7.3□□□□□ -1.24
CCDC38-206ENST00000548771 TTLL10Q6ZVT0 673 aa7.3□□□□□ -1.24
CCDC38-206ENST00000548771 ZNF296Q8WUU4 475 aaPredicted RBP7.3□□□□□ -1.24
CCDC38-206ENST00000548771 KIF2CQ99661 725 aa7.3□□□□□ -1.24
CCDC38-206ENST00000548771 TLR3O15455 904 aaKnown RBP7.29□□□□□ -1.24
CCDC38-206ENST00000548771 ZGLP1P0C6A0 271 aa7.29□□□□□ -1.24
CCDC38-206ENST00000548771 CWF19L2Q2TBE0 894 aaKnown RBP7.29□□□□□ -1.24
CCDC38-206ENST00000548771 CDCP2Q5VXM1 449 aa7.29□□□□□ -1.24
CCDC38-206ENST00000548771 MPZL3Q6UWV2 235 aa7.29□□□□□ -1.24
CCDC38-206ENST00000548771 EBF1Q9UH73 591 aa7.29□□□□□ -1.24
CCDC38-206ENST00000548771 DUSP13Q9UII6 198 aa7.29□□□□□ -1.24
CCDC38-206ENST00000548771 PCDHB14Q9Y5E9 798 aa7.29□□□□□ -1.24
CCDC38-206ENST00000548771 EGR3Q06889 387 aa7.28□□□□□ -1.24
CCDC38-206ENST00000548771 SIAH1Q8IUQ4 282 aa7.28□□□□□ -1.24
CCDC38-206ENST00000548771 REXO1Q8N1G1 1221 aaKnown RBP7.28□□□□□ -1.24
CCDC38-206ENST00000548771 ABHD4Q8TB40 342 aa7.28□□□□□ -1.24
CCDC38-206ENST00000548771 PPP1R16BQ96T49 567 aa7.28□□□□□ -1.24
CCDC38-206ENST00000548771 PCDHA11Q9Y5I1 949 aa7.28□□□□□ -1.24
CCDC38-206ENST00000548771 HK2P52789 917 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 TEKQ02763 1124 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 NR0B2Q15466 257 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 ARSHQ5FYA8 562 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 HS2ST1Q7LGA3 356 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 SLITRK4Q8IW52 837 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 PDZD8Q8NEN9 1154 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 ENOX1Q8TC92 643 aaKnown RBP7.27□□□□□ -1.25
CCDC38-206ENST00000548771 DIRC2Q96SL1 478 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 CNNM2Q9H8M5 875 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 GMIPQ9P107 970 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 GGT7Q9UJ14 662 aa7.27□□□□□ -1.25
CCDC38-206ENST00000548771 NPIPB6E9PJ23 425 aa7.26□□□□□ -1.25
CCDC38-206ENST00000548771 ZNF16P17020 682 aaPredicted RBP7.26□□□□□ -1.25
CCDC38-206ENST00000548771 TNNI2P48788 182 aa7.26□□□□□ -1.25
CCDC38-206ENST00000548771 CLCQ05315 142 aa7.26□□□□□ -1.25
CCDC38-206ENST00000548771 PHACTR4Q8IZ21 702 aa7.26□□□□□ -1.25
CCDC38-206ENST00000548771 MYLIPQ8WY64 445 aa7.26□□□□□ -1.25
CCDC38-206ENST00000548771 NT5C1AQ9BXI3 368 aa7.26□□□□□ -1.25
CCDC38-206ENST00000548771 UBP1Q9NZI7 540 aa7.26□□□□□ -1.25
CCDC38-206ENST00000548771 INHBBP09529 407 aa7.25□□□□□ -1.25
CCDC38-206ENST00000548771 RAC2P15153 192 aa7.25□□□□□ -1.25
CCDC38-206ENST00000548771 GBP1P32455 592 aa7.25□□□□□ -1.25
CCDC38-206ENST00000548771 NBPF12Q5TAG4 269 aaPredicted RBP7.25□□□□□ -1.25
CCDC38-206ENST00000548771 OVOS1Q6IE37 1185 aa7.25□□□□□ -1.25
CCDC38-206ENST00000548771 USHBP1Q8N6Y0 703 aa7.25□□□□□ -1.25
CCDC38-206ENST00000548771 LINC01599Q8WXQ3 324 aa7.25□□□□□ -1.25
CCDC38-206ENST00000548771 ATG4CQ96DT6 458 aa7.25□□□□□ -1.25
CCDC38-206ENST00000548771 G6PC3Q9BUM1 346 aa7.25□□□□□ -1.25
CCDC38-206ENST00000548771 HDAC8Q9BY41 377 aa7.25□□□□□ -1.25
CCDC38-206ENST00000548771 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.25□□□□□ -1.25
CCDC38-206ENST00000548771 MLECQ14165 292 aa7.24□□□□□ -1.25
CCDC38-206ENST00000548771 NBPF9Q3BBW0 867 aa7.24□□□□□ -1.25
CCDC38-206ENST00000548771 TIGD5Q53EQ6 642 aa7.24□□□□□ -1.25
CCDC38-206ENST00000548771 LILRA2Q8N149 483 aa7.24□□□□□ -1.25
CCDC38-206ENST00000548771 FBXO15Q8NCQ5 510 aaPredicted RBP7.24□□□□□ -1.25
CCDC38-206ENST00000548771 SYTL5Q8TDW5 730 aaPredicted RBP7.24□□□□□ -1.25
CCDC38-206ENST00000548771 EAF1Q96JC9 268 aaPredicted RBP7.24□□□□□ -1.25
CCDC38-206ENST00000548771 NSUN3Q9H649 340 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms