RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ADAM21Q9UKJ8 722 aa11.19□□□□□ -0.62
SMARCD1-205ENST00000548573 A0A0U1RQJ8 604 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 FAM205CA6NFA0 338 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 H3BQF6 201 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 EIF3JO75822 258 aaKnown RBP11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 EARS2Q5JPH6 523 aaKnown RBP11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 SLC35F6Q8N357 371 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 ATRIPQ8WXE1 791 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 TNFRSF25Q93038 417 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 NAPGQ99747 312 aaPredicted RBP11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 ZSWIM4Q9H7M6 989 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 ABHD10Q9NUJ1 306 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 RWDD2AQ9UIY3 292 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 L1RE1Q9UN81 338 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 DISP2A7MBM2 1401 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 CALM1P0DP23 149 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 CALM2P0DP24 149 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 CALM3P0DP25 149 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 ATP2C1P98194 919 aaPredicted RBP11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 RAD51AP2Q09MP3 1159 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 KRT31Q15323 416 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 ZSCAN26Q16670 478 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 CYP26C1Q6V0L0 522 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 BRINP3Q76B58 766 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 IQUBQ8NA54 791 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 GOLGA5Q8TBA6 731 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 PNKPQ96T60 521 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 CTNND2Q9UQB3 1225 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 NHSL1Q5SYE7 1610 aa11.18□□□□□ -0.62
SMARCD1-205ENST00000548573 ITGB4P16144 1822 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 CTAGE15A4D2H0 777 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 N4BP3O15049 544 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 CTAGE8P0CG41 777 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 PCP11498 1178 aaKnown RBP11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 CASP1P29466 404 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 IL6STP40189 918 aaPredicted RBP11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 ERVK-24P63145 666 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 E2F4Q16254 413 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 TTC38Q5R3I4 469 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 CATIPQ7Z7H3 387 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 CTAGE6Q86UF2 777 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 CTAGE4Q8IX94 777 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 SMYD4Q8IYR2 804 aaPredicted RBP11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 ENAHQ8N8S7 591 aaPredicted RBP11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 ANKRD20A12PQ8NF67 263 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 ZSCAN10Q96SZ4 725 aaPredicted RBP11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 PODXL2Q9NZ53 605 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 CWC15Q9P013 229 aaKnown RBP11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 LRP2BPQ9P2M1 347 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 IQSEC3Q9UPP2 1182 aaPredicted RBP11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 ZBTB1Q9Y2K1 713 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 XDHP47989 1333 aa11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 SOS2Q07890 1332 aaPredicted RBP11.17□□□□□ -0.62
SMARCD1-205ENST00000548573 GTPBP6O43824 516 aaPredicted RBP11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 CAPN2P17655 700 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 ARHGAP25P42331 645 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 COPB1P53618 953 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 EVA1CP58658 441 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 PAK1Q13153 545 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 DZIP3Q86Y13 1208 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 MIGA1Q8NAN2 632 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 ACRBPQ8NEB7 543 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 PDE11AQ9HCR9 933 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 RMND1Q9NWS8 449 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 ABCA3Q99758 1704 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 MINDY4BA8MYZ0 360 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 ZBTB22O15209 634 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 CYP7A1P22680 504 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 CCT6AP40227 531 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 BCAMP50895 628 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 PTGDRQ13258 359 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 MCM6Q14566 821 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 ZNF174Q15697 407 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 NPY5RQ15761 445 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 TCP11X2Q5H9J9 407 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 IFIT1BQ5T764 474 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 ZNF658Q5TYW1 1059 aaPredicted RBP11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 RRAGBQ5VZM2 374 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 CDC5LQ99459 802 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 ABCB6Q9NP58 842 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 V9GY48 417 aaPredicted RBP11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 SLIT2O94813 1529 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 DLEC1Q9Y238 1755 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 MYH2Q9UKX2 1941 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 BCL9O00512 1426 aa11.16□□□□□ -0.62
SMARCD1-205ENST00000548573 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 SNAP23O00161 211 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 WNT7AO00755 349 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 PRDM1O75626 825 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 DDAH1O94760 285 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 FGRP09769 529 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 ACTN2P35609 894 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 AMPD2Q01433 879 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 TROAPQ12815 778 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 WDR93Q6P2C0 686 aa11.15□□□□□ -0.62
SMARCD1-205ENST00000548573 IQCA1Q86XH1 822 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms