RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 GH2P01242 217 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 HOXC6P09630 235 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 SMAD3P84022 425 aaKnown RBP11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 OS9Q13438 667 aaPredicted RBP11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 SNX17Q15036 470 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 C20orf194Q5TEA3 1177 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 SLC39A5Q6ZMH5 540 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 KIF1BPQ96EK5 621 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 FEZ1Q99689 392 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 TLR7Q9NYK1 1049 aaKnown RBP11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 LRP2BPQ9P2M1 347 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 RAPGEFL1Q9UHV5 662 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 EXOC6BQ9Y2D4 811 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 RABGAP1Q9Y3P9 1069 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 NCOR1O75376 2440 aa11.86□□□□□ -0.51
SLC48A1-206ENST00000548498 TRIM43BA6NCK2 446 aa11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 GLRX3O76003 335 aaKnown RBP11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 VCAM1P19320 739 aa11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 EPHB4P54760 987 aa11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 ATP2B2Q01814 1243 aa11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 NAA16Q6N069 864 aaPredicted RBP11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 CERS3Q8IU89 383 aa11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 TRIM43Q96BQ3 446 aaPredicted RBP11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 NOL10Q9BSC4 688 aaKnown RBP11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 SNRKQ9NRH2 765 aa11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 GINM1Q9NU53 330 aa11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 REV3LO60673 3130 aa11.85□□□□□ -0.51
SLC48A1-206ENST00000548498 MYH7P12883 1935 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 SPDYE16A6NNV3 312 aaPredicted RBP11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 USP17L15C9J2P7 530 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 USP17L13C9JLJ4 530 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 USP17L11C9JVI0 530 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 USP17L18D6R9N7 530 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 USP17L22D6RA61 530 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 USP17L17D6RBQ6 530 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 USP17L19D6RCP7 530 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 USP17L20D6RJB6 530 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 COL9A1P20849 921 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 ITGB8P26012 769 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 CCNA1P78396 465 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 USP17L24Q0WX57 530 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 CATSPERGQ6ZRH7 1159 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 FOXP4Q8IVH2 680 aaPredicted RBP11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 ACER1Q8TDN7 264 aa11.84□□□□□ -0.51
SLC48A1-206ENST00000548498 KBTBD13C9JR72 458 aa11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 BAG3O95817 575 aa11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 PLCG2P16885 1265 aa11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 ZAP70P43403 619 aa11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 DYNLL1P63167 89 aaKnown RBP11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 LBX2Q6XYB7 198 aa11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 CLASRPQ8N2M8 674 aaKnown RBP11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 SYMPKQ92797 1274 aaKnown RBP11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 FERMT2Q96AC1 680 aa11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 CCDC8Q9H0W5 538 aaPredicted RBP11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 PIH1D3Q9NQM4 214 aaKnown RBP11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 IVNS1ABPQ9Y6Y0 642 aa11.83□□□□□ -0.52
SLC48A1-206ENST00000548498 CHD9Q3L8U1 2897 aa11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 HLA-DOAP06340 250 aa11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 ADORA2AP29274 412 aa11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 ADCYAP1R1P41586 468 aa11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 GRIN2CQ14957 1233 aa11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 FAM47AQ5JRC9 791 aa11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 TATDN1Q6P1N9 297 aa11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 AACSQ86V21 672 aa11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 ARRDC4Q8NCT1 418 aa11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 RNPC3Q96LT9 517 aaKnown RBP11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 KIAA1683Q9H0B3 1180 aa11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 RPAP3Q9H6T3 665 aaPredicted RBP11.82□□□□□ -0.52
SLC48A1-206ENST00000548498 TMEM265A0A087WTH1 108 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 TNFRSF10AO00220 468 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 SEPT4O43236 478 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 TLE2Q04725 743 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 RAB3GAP1Q15042 981 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 LRRC41Q15345 812 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 TJAP1Q5JTD0 557 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 PRAMEF19Q5SWL8 479 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 OLFML2BQ68BL8 750 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 MOV10L1Q9BXT6 1211 aaKnown RBP11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 BDP1A6H8Y1 2624 aa11.81□□□□□ -0.52
SLC48A1-206ENST00000548498 MYH4Q9Y623 1939 aa11.8□□□□□ -0.52
SLC48A1-206ENST00000548498 COBLO75128 1261 aa11.8□□□□□ -0.52
SLC48A1-206ENST00000548498 ATP5JP18859 108 aa11.8□□□□□ -0.52
SLC48A1-206ENST00000548498 DNAJB2P25686 324 aa11.8□□□□□ -0.52
SLC48A1-206ENST00000548498 GUCY1A2P33402 732 aa11.8□□□□□ -0.52
SLC48A1-206ENST00000548498 C1orf53Q5VUE5 145 aa11.8□□□□□ -0.52
SLC48A1-206ENST00000548498 DPP9Q86TI2 863 aa11.8□□□□□ -0.52
SLC48A1-206ENST00000548498 IL1RAPL2Q9NP60 686 aa11.8□□□□□ -0.52
SLC48A1-206ENST00000548498 GREB1LQ9C091 1923 aaPredicted RBP11.8□□□□□ -0.52
SLC48A1-206ENST00000548498 CLTBP09497 229 aa11.79□□□□□ -0.52
SLC48A1-206ENST00000548498 ERCC3P19447 782 aa11.79□□□□□ -0.52
SLC48A1-206ENST00000548498 SHMT1P34896 483 aa11.79□□□□□ -0.52
SLC48A1-206ENST00000548498 USP14P54578 494 aa11.79□□□□□ -0.52
SLC48A1-206ENST00000548498 RRP1P56182 461 aaKnown RBP11.79□□□□□ -0.52
SLC48A1-206ENST00000548498 EVX2Q03828 476 aa11.79□□□□□ -0.52
SLC48A1-206ENST00000548498 MAP3K12Q12852 859 aa11.79□□□□□ -0.52
SLC48A1-206ENST00000548498 TTF1Q15361 905 aaPredicted RBP11.79□□□□□ -0.52
SLC48A1-206ENST00000548498 ABCB5Q2M3G0 1257 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms