RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 SOCS4Q8WXH5 440 aa15□□□□□ -0.01
GCN1-204ENST00000548132 STRBPQ96SI9 672 aaKnown RBP15□□□□□ -0.01
GCN1-204ENST00000548132 RABGAP1Q9Y3P9 1069 aa15□□□□□ -0.01
GCN1-204ENST00000548132 SLC4A4Q9Y6R1 1079 aa15□□□□□ -0.01
GCN1-204ENST00000548132 H0YGN5 161 aa14.99□□□□□ -0.01
GCN1-204ENST00000548132 CYP2B6P20813 491 aa14.99□□□□□ -0.01
GCN1-204ENST00000548132 MAPK4P31152 587 aa14.99□□□□□ -0.01
GCN1-204ENST00000548132 ICA1Q05084 483 aa14.99□□□□□ -0.01
GCN1-204ENST00000548132 APPBP2Q92624 585 aa14.99□□□□□ -0.01
GCN1-204ENST00000548132 APBA2Q99767 749 aa14.99□□□□□ -0.01
GCN1-204ENST00000548132 CABP5Q9NP86 173 aa14.99□□□□□ -0.01
GCN1-204ENST00000548132 FLRT1Q9NZU1 646 aa14.99□□□□□ -0.01
GCN1-204ENST00000548132 PLIN4Q96Q06 1357 aa14.98□□□□□ -0.01
GCN1-204ENST00000548132 MCM3APO60318 1980 aa14.98□□□□□ -0.01
GCN1-204ENST00000548132 TTC41PQ6P2S7 1318 aa14.98□□□□□ -0.01
GCN1-204ENST00000548132 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
GCN1-204ENST00000548132 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
GCN1-204ENST00000548132 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
GCN1-204ENST00000548132 GRB14Q14449 540 aa14.98□□□□□ -0.01
GCN1-204ENST00000548132 HABP4Q5JVS0 413 aaKnown RBP14.98□□□□□ -0.01
GCN1-204ENST00000548132 PRO3102Q9H379 93 aa14.98□□□□□ -0.01
GCN1-204ENST00000548132 ARPP21Q9UBL0 812 aaPredicted RBP14.98□□□□□ -0.01
GCN1-204ENST00000548132 TMX2Q9Y320 296 aa14.98□□□□□ -0.01
GCN1-204ENST00000548132 GPAA1O43292 621 aa14.97□□□□□ -0.01
GCN1-204ENST00000548132 RASA1P20936 1047 aa14.97□□□□□ -0.01
GCN1-204ENST00000548132 SBK1Q52WX2 424 aa14.97□□□□□ -0.01
GCN1-204ENST00000548132 PLEKHH3Q7Z736 793 aa14.97□□□□□ -0.01
GCN1-204ENST00000548132 SEC62Q99442 399 aaKnown RBP14.97□□□□□ -0.01
GCN1-204ENST00000548132 NUDT12Q9BQG2 462 aa14.97□□□□□ -0.01
GCN1-204ENST00000548132 VCPKMTQ9H867 229 aa14.97□□□□□ -0.01
GCN1-204ENST00000548132 PFASO15067 1338 aa14.96□□□□□ -0.01
GCN1-204ENST00000548132 RPTORQ8N122 1335 aa14.96□□□□□ -0.01
GCN1-204ENST00000548132 IGKV6D-41A0A0C4DH26 115 aa14.96□□□□□ -0.01
GCN1-204ENST00000548132 RNF113AO15541 343 aaKnown RBP14.96□□□□□ -0.01
GCN1-204ENST00000548132 ZKSCAN1P17029 563 aaPredicted RBP14.96□□□□□ -0.01
GCN1-204ENST00000548132 CCND3P30281 292 aaPredicted RBP14.96□□□□□ -0.01
GCN1-204ENST00000548132 CACNB2Q08289 660 aaPredicted RBP14.96□□□□□ -0.01
GCN1-204ENST00000548132 MAP2K5Q13163 448 aa14.96□□□□□ -0.01
GCN1-204ENST00000548132 ZSCAN25Q6NSZ9 544 aa14.96□□□□□ -0.01
GCN1-204ENST00000548132 SPICE1Q8N0Z3 855 aa14.96□□□□□ -0.01
GCN1-204ENST00000548132 ATG4CQ96DT6 458 aa14.96□□□□□ -0.01
GCN1-204ENST00000548132 MOV10L1Q9BXT6 1211 aaKnown RBP14.96□□□□□ -0.01
GCN1-204ENST00000548132 COLQQ9Y215 455 aaPredicted RBP14.96□□□□□ -0.01
GCN1-204ENST00000548132 HOXC6P09630 235 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 EEF2P13639 858 aaKnown RBP14.95□□□□□ -0.02
GCN1-204ENST00000548132 MX1P20591 662 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 RGS2P41220 211 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 FXR1P51114 621 aaKnown RBP eCLIP14.95□□□□□ -0.02
GCN1-204ENST00000548132 REPS2Q8NFH8 660 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 NPLOC4Q8TAT6 608 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 LPAR1Q92633 364 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 GPATCH3Q96I76 525 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 FBXO28Q9NVF7 368 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 PCDH10Q9P2E7 1040 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 OGDHLQ9ULD0 1010 aa14.95□□□□□ -0.02
GCN1-204ENST00000548132 WDR46O15213 610 aaKnown RBP14.94□□□□□ -0.02
GCN1-204ENST00000548132 PTPREP23469 700 aa14.94□□□□□ -0.02
GCN1-204ENST00000548132 DSG3P32926 999 aa14.94□□□□□ -0.02
GCN1-204ENST00000548132 ZMYM1Q5SVZ6 1142 aa14.94□□□□□ -0.02
GCN1-204ENST00000548132 LHX8Q68G74 356 aa14.94□□□□□ -0.02
GCN1-204ENST00000548132 GIMAP6Q6P9H5 292 aa14.94□□□□□ -0.02
GCN1-204ENST00000548132 TRPV1Q8NER1 839 aa14.94□□□□□ -0.02
GCN1-204ENST00000548132 GCC1Q96CN9 775 aa14.94□□□□□ -0.02
GCN1-204ENST00000548132 PAWRQ96IZ0 340 aaKnown RBP14.94□□□□□ -0.02
GCN1-204ENST00000548132 CCDC17Q96LX7 622 aa14.94□□□□□ -0.02
GCN1-204ENST00000548132 SPATC1LQ9H0A9 340 aa14.94□□□□□ -0.02
GCN1-204ENST00000548132 SLC15A5A6NIM6 579 aa14.93□□□□□ -0.02
GCN1-204ENST00000548132 HDAC1Q13547 482 aaPredicted RBP14.93□□□□□ -0.02
GCN1-204ENST00000548132 ARHGEF10LQ9HCE6 1279 aa14.93□□□□□ -0.02
GCN1-204ENST00000548132 HMX1Q9NP08 348 aaPredicted RBP14.93□□□□□ -0.02
GCN1-204ENST00000548132 ADAMTS5Q9UNA0 930 aa14.93□□□□□ -0.02
GCN1-204ENST00000548132 TACC3Q9Y6A5 838 aa14.93□□□□□ -0.02
GCN1-204ENST00000548132 SMCHD1A6NHR9 2005 aa14.93□□□□□ -0.02
GCN1-204ENST00000548132 GLRX3O76003 335 aaKnown RBP14.92□□□□□ -0.02
GCN1-204ENST00000548132 ZFYP08048 801 aaPredicted RBP14.92□□□□□ -0.02
GCN1-204ENST00000548132 COL6A1P12109 1028 aa14.92□□□□□ -0.02
GCN1-204ENST00000548132 CYBAP13498 195 aa14.92□□□□□ -0.02
GCN1-204ENST00000548132 CCNA1P78396 465 aa14.92□□□□□ -0.02
GCN1-204ENST00000548132 COG2Q14746 738 aa14.92□□□□□ -0.02
GCN1-204ENST00000548132 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
GCN1-204ENST00000548132 CCDC129Q6ZRS4 1044 aa14.92□□□□□ -0.02
GCN1-204ENST00000548132 ANKLE1Q8NAG6 615 aa14.92□□□□□ -0.02
GCN1-204ENST00000548132 SHCBP1Q8NEM2 672 aa14.92□□□□□ -0.02
GCN1-204ENST00000548132 ZNF214Q9UL59 606 aaPredicted RBP14.92□□□□□ -0.02
GCN1-204ENST00000548132 PRDM1O75626 825 aa14.91□□□□□ -0.02
GCN1-204ENST00000548132 FLOT1O75955 427 aa14.91□□□□□ -0.02
GCN1-204ENST00000548132 TFRCP02786 760 aaKnown RBP14.91□□□□□ -0.02
GCN1-204ENST00000548132 ERCC3P19447 782 aa14.91□□□□□ -0.02
GCN1-204ENST00000548132 ADORA2AP29274 412 aa14.91□□□□□ -0.02
GCN1-204ENST00000548132 TMEM132BQ14DG7 1078 aa14.91□□□□□ -0.02
GCN1-204ENST00000548132 FAM83BQ5T0W9 1011 aa14.91□□□□□ -0.02
GCN1-204ENST00000548132 TRMT44Q8IYL2 757 aaKnown RBP14.91□□□□□ -0.02
GCN1-204ENST00000548132 STK11IPQ8N1F8 1099 aa14.91□□□□□ -0.02
GCN1-204ENST00000548132 YTHDC1Q96MU7 727 aaKnown RBP14.91□□□□□ -0.02
GCN1-204ENST00000548132 NUP88Q99567 741 aaPredicted RBP14.91□□□□□ -0.02
GCN1-204ENST00000548132 FSD1Q9BTV5 496 aa14.91□□□□□ -0.02
GCN1-204ENST00000548132 HTATIP2Q9BUP3 242 aa14.91□□□□□ -0.02
GCN1-204ENST00000548132 SH2D4AQ9H788 454 aa14.91□□□□□ -0.02
GCN1-204ENST00000548132 STAP2Q9UGK3 403 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms