RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 ANKS1AQ92625 1134 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 MYH1P12882 1939 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 NPY5RQ15761 445 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 PFKFB3Q16875 520 aaPredicted RBP13.53□□□□□ -0.24
RNF41-203ENST00000547967 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 USP17L2Q6R6M4 530 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 ZFPM1Q8IX07 1006 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 BRMS1Q9HCU9 246 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 DLEC1Q9Y238 1755 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 WNT7AO00755 349 aa13.52□□□□□ -0.24
RNF41-203ENST00000547967 CYTH3O43739 400 aa13.52□□□□□ -0.24
RNF41-203ENST00000547967 GRM4Q14833 912 aa13.52□□□□□ -0.24
RNF41-203ENST00000547967 SLC35G1Q2M3R5 365 aa13.52□□□□□ -0.24
RNF41-203ENST00000547967 ISM2Q6H9L7 571 aa13.52□□□□□ -0.24
RNF41-203ENST00000547967 C7orf43Q8WVR3 580 aa13.52□□□□□ -0.24
RNF41-203ENST00000547967 SNED1Q8TER0 1413 aa13.52□□□□□ -0.24
RNF41-203ENST00000547967 KLRF2D3W0D1 207 aa13.52□□□□□ -0.25
RNF41-203ENST00000547967 STX1AQ16623 288 aa13.52□□□□□ -0.25
RNF41-203ENST00000547967 DACT2Q5SW24 774 aa13.52□□□□□ -0.25
RNF41-203ENST00000547967 STRIP1Q5VSL9 837 aa13.52□□□□□ -0.25
RNF41-203ENST00000547967 HHIPL2Q6UWX4 724 aa13.52□□□□□ -0.25
RNF41-203ENST00000547967 PIK3AP1Q6ZUJ8 805 aa13.52□□□□□ -0.25
RNF41-203ENST00000547967 VAT1LQ9HCJ6 419 aa13.52□□□□□ -0.25
RNF41-203ENST00000547967 KIAA1468Q9P260 1216 aa13.52□□□□□ -0.25
RNF41-203ENST00000547967 SERPINB13Q9UIV8 391 aa13.52□□□□□ -0.25
RNF41-203ENST00000547967 SRCAPQ6ZRS2 3230 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 CUTAO60888 179 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 AKR1B1P15121 316 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 BAG6P46379 1132 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 ZRSR1Q15695 479 aaKnown RBP13.51□□□□□ -0.25
RNF41-203ENST00000547967 ZNF174Q15697 407 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 RESP18Q5W5W9 173 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 DDX60LQ5H9U9 1706 aaKnown RBP13.51□□□□□ -0.25
RNF41-203ENST00000547967 TRIM75PA6NK02 468 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 FAM196BA6NMK8 535 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 PPIP5K2O43314 1243 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 HEATR3Q7Z4Q2 680 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 HOMER1Q86YM7 354 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 OSBPL5Q9H0X9 879 aaPredicted RBP13.51□□□□□ -0.25
RNF41-203ENST00000547967 KCNH3Q9ULD8 1083 aa13.51□□□□□ -0.25
RNF41-203ENST00000547967 GNAQP50148 359 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 GABPAQ06546 454 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 LONRF3Q496Y0 759 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 ZSCAN30Q86W11 494 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 ZSCAN29Q8IWY8 852 aaPredicted RBP13.5□□□□□ -0.25
RNF41-203ENST00000547967 LRRC47Q8N1G4 583 aaKnown RBP13.5□□□□□ -0.25
RNF41-203ENST00000547967 PDILTQ8N807 584 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 SPC24Q8NBT2 197 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 RASGRP4Q8TDF6 673 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 FBXO2Q9UK22 296 aaPredicted RBP13.5□□□□□ -0.25
RNF41-203ENST00000547967 HPSEQ9Y251 543 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 ADAMTSL1Q8N6G6 1762 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 PALM3A6NDB9 673 aaPredicted RBP13.5□□□□□ -0.25
RNF41-203ENST00000547967 MPHOSPH10O00566 681 aaKnown RBP13.5□□□□□ -0.25
RNF41-203ENST00000547967 PARP1P09874 1014 aaKnown RBP13.5□□□□□ -0.25
RNF41-203ENST00000547967 PTPREP23469 700 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 NT5C2P49902 561 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 ATP2B2Q01814 1243 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 USP49Q70CQ1 688 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 ZNF830Q96NB3 372 aaPredicted RBP13.5□□□□□ -0.25
RNF41-203ENST00000547967 UBA5Q9GZZ9 404 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 ANO10Q9NW15 660 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 SCN9AQ15858 1988 aa13.5□□□□□ -0.25
RNF41-203ENST00000547967 FRMPD2Q68DX3 1309 aaPredicted RBP13.49□□□□□ -0.25
RNF41-203ENST00000547967 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 TOP1P11387 765 aaKnown RBP13.49□□□□□ -0.25
RNF41-203ENST00000547967 MSNP26038 577 aaKnown RBP13.49□□□□□ -0.25
RNF41-203ENST00000547967 KIAA2012Q0VF49 1180 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 TNFRSF25Q93038 417 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 ZDHHC15Q96MV8 337 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 MTMR4Q9NYA4 1195 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 CLIP2Q9UDT6 1046 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 CCDC39Q9UFE4 941 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 CEP131Q9UPN4 1083 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 PNOCQ13519 176 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 DPCR1Q3MIW9 517 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 WWC2Q6AWC2 1192 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 CNNM3Q8NE01 707 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 CSRNP2Q9H175 543 aa13.49□□□□□ -0.25
RNF41-203ENST00000547967 YDJCA8MPS7 323 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 BECN2A8MW95 431 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 GOLGA6L19H0YKK7 550 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 POLR2DO15514 142 aaKnown RBP13.48□□□□□ -0.25
RNF41-203ENST00000547967 HLA-DOAP06340 250 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 IQCB1Q15051 598 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 TRIM5Q9C035 493 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 NOL7Q9UMY1 257 aaKnown RBP13.48□□□□□ -0.25
RNF41-203ENST00000547967 SRPRBQ9Y5M8 271 aaKnown RBP13.48□□□□□ -0.25
RNF41-203ENST00000547967 DDTLA6NHG4 134 aaPredicted RBP13.48□□□□□ -0.25
RNF41-203ENST00000547967 FOXN1O15353 648 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 MCM7P33993 719 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 SHMT1P34896 483 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 TTC38Q5R3I4 469 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 BLIDQ8IZY5 108 aa13.48□□□□□ -0.25
RNF41-203ENST00000547967 TDRD3Q9H7E2 651 aaKnown RBP13.48□□□□□ -0.25
RNF41-203ENST00000547967 FAM13BQ9NYF5 915 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms