RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 LOC105371045A0A1W2PR82 267 aa6.69□□□□□ -1.34
SCAF11-210ENST00000547654 LTKP29376 864 aa6.69□□□□□ -1.34
SCAF11-210ENST00000547654 EGR3Q06889 387 aa6.69□□□□□ -1.34
SCAF11-210ENST00000547654 SLC6A19Q695T7 634 aa6.69□□□□□ -1.34
SCAF11-210ENST00000547654 OXR1Q8N573 874 aa6.69□□□□□ -1.34
SCAF11-210ENST00000547654 PDZD8Q8NEN9 1154 aa6.69□□□□□ -1.34
SCAF11-210ENST00000547654 RSRP1Q9BUV0 290 aa6.69□□□□□ -1.34
SCAF11-210ENST00000547654 IRF2BPLQ9H1B7 796 aa6.69□□□□□ -1.34
SCAF11-210ENST00000547654 MIR1-1HGQ9H1L0 117 aa6.69□□□□□ -1.34
SCAF11-210ENST00000547654 SLC6A17Q9H1V8 727 aa6.69□□□□□ -1.34
SCAF11-210ENST00000547654 WASH4PA8MWX3 477 aa6.68□□□□□ -1.34
SCAF11-210ENST00000547654 CILPO75339 1184 aa6.68□□□□□ -1.34
SCAF11-210ENST00000547654 SRFP11831 508 aa6.68□□□□□ -1.34
SCAF11-210ENST00000547654 MAP3K11Q16584 847 aa6.68□□□□□ -1.34
SCAF11-210ENST00000547654 CCDC84Q86UT8 332 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-210ENST00000547654 IRF2BP1Q8IU81 584 aa6.68□□□□□ -1.34
SCAF11-210ENST00000547654 LILRA2Q8N149 483 aa6.68□□□□□ -1.34
SCAF11-210ENST00000547654 Q96M66 194 aa6.68□□□□□ -1.34
SCAF11-210ENST00000547654 C19orf44Q9H6X5 657 aa6.68□□□□□ -1.34
SCAF11-210ENST00000547654 KCNH3Q9ULD8 1083 aa6.68□□□□□ -1.34
SCAF11-210ENST00000547654 PRR36Q9H6K5 1346 aa6.68□□□□□ -1.34
SCAF11-210ENST00000547654 FITM1A5D6W6 292 aa6.67□□□□□ -1.34
SCAF11-210ENST00000547654 SORBS3O60504 671 aa6.67□□□□□ -1.34
SCAF11-210ENST00000547654 GAB4Q2WGN9 574 aa6.67□□□□□ -1.34
SCAF11-210ENST00000547654 DIEXFQ68CQ4 756 aaKnown RBP6.67□□□□□ -1.34
SCAF11-210ENST00000547654 ZNF605Q86T29 641 aa6.67□□□□□ -1.34
SCAF11-210ENST00000547654 DNAJB8Q8NHS0 232 aa6.67□□□□□ -1.34
SCAF11-210ENST00000547654 DHX38Q92620 1227 aaKnown RBP6.67□□□□□ -1.34
SCAF11-210ENST00000547654 ZGLP1P0C6A0 271 aa6.66□□□□□ -1.34
SCAF11-210ENST00000547654 LMNB2Q03252 620 aa6.66□□□□□ -1.34
SCAF11-210ENST00000547654 DUSP15Q9H1R2 295 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-210ENST00000547654 CWC22Q9HCG8 908 aaKnown RBP6.66□□□□□ -1.34
SCAF11-210ENST00000547654 ADAM30Q9UKF2 790 aa6.66□□□□□ -1.34
SCAF11-210ENST00000547654 CEP131Q9UPN4 1083 aa6.66□□□□□ -1.34
SCAF11-210ENST00000547654 SEMA7AO75326 666 aa6.65□□□□□ -1.34
SCAF11-210ENST00000547654 HOXA5P20719 270 aa6.65□□□□□ -1.34
SCAF11-210ENST00000547654 DLG4P78352 724 aa6.65□□□□□ -1.34
SCAF11-210ENST00000547654 RPL6Q02878 288 aaKnown RBP6.65□□□□□ -1.34
SCAF11-210ENST00000547654 CAMK2GQ13555 558 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-210ENST00000547654 BNC2Q6ZN30 1099 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-210ENST00000547654 TSPYL5Q86VY4 417 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-210ENST00000547654 MCATQ8IVS2 390 aaKnown RBP6.65□□□□□ -1.34
SCAF11-210ENST00000547654 DTWD2Q8NBA8 298 aa6.65□□□□□ -1.34
SCAF11-210ENST00000547654 PPP1R13LQ8WUF5 828 aa6.65□□□□□ -1.34
SCAF11-210ENST00000547654 CYB5D2Q8WUJ1 264 aa6.65□□□□□ -1.34
SCAF11-210ENST00000547654 TMEM74Q96NL1 305 aa6.65□□□□□ -1.34
SCAF11-210ENST00000547654 MCOLN1Q9GZU1 580 aa6.65□□□□□ -1.34
SCAF11-210ENST00000547654 ZCCHC4Q9H5U6 513 aa6.65□□□□□ -1.34
SCAF11-210ENST00000547654 POLR3KQ9Y2Y1 108 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-210ENST00000547654 GREM1O60565 184 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 F13A1P00488 732 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 PF4P02776 101 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 RLBP1P12271 317 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 ZNF16P17020 682 aaPredicted RBP6.64□□□□□ -1.35
SCAF11-210ENST00000547654 PDE6BP35913 854 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 XPCQ01831 940 aaPredicted RBP6.64□□□□□ -1.35
SCAF11-210ENST00000547654 TSNAXIP1Q2TAA8 658 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 TIGD5Q53EQ6 642 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 TMEM132EQ6IEE7 984 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 ACSF2Q96CM8 615 aaPredicted RBP6.64□□□□□ -1.35
SCAF11-210ENST00000547654 INTS4Q96HW7 963 aaKnown RBP6.64□□□□□ -1.35
SCAF11-210ENST00000547654 GPR62Q9BZJ7 368 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 COPRSQ9NQ92 184 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 USP35Q9P2H5 1018 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 GPR160Q9UJ42 338 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 JAG2Q9Y219 1238 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 PCDHA11Q9Y5I1 949 aa6.64□□□□□ -1.35
SCAF11-210ENST00000547654 F6X3S4 739 aa6.63□□□□□ -1.35
SCAF11-210ENST00000547654 RFXAPO00287 272 aa6.63□□□□□ -1.35
SCAF11-210ENST00000547654 DNAJA2O60884 412 aa6.63□□□□□ -1.35
SCAF11-210ENST00000547654 HMGB1P09429 215 aaKnown RBP6.63□□□□□ -1.35
SCAF11-210ENST00000547654 YARSP54577 528 aaKnown RBP6.63□□□□□ -1.35
SCAF11-210ENST00000547654 DUSP4Q13115 394 aa6.63□□□□□ -1.35
SCAF11-210ENST00000547654 TMEM201Q5SNT2 666 aa6.63□□□□□ -1.35
SCAF11-210ENST00000547654 FAM13CQ8NE31 585 aa6.63□□□□□ -1.35
SCAF11-210ENST00000547654 BAHD1Q8TBE0 780 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-210ENST00000547654 GATAD2BQ8WXI9 593 aa6.63□□□□□ -1.35
SCAF11-210ENST00000547654 SP110Q9HB58 689 aa6.63□□□□□ -1.35
SCAF11-210ENST00000547654 PARD6AQ9NPB6 346 aa6.63□□□□□ -1.35
SCAF11-210ENST00000547654 CNOT6Q9ULM6 557 aaKnown RBP6.63□□□□□ -1.35
SCAF11-210ENST00000547654 YBX2Q9Y2T7 364 aaKnown RBP6.63□□□□□ -1.35
SCAF11-210ENST00000547654 CORINQ9Y5Q5 1042 aa6.63□□□□□ -1.35
SCAF11-210ENST00000547654 PEX10O60683 326 aa6.62□□□□□ -1.35
SCAF11-210ENST00000547654 BMP7P18075 431 aa6.62□□□□□ -1.35
SCAF11-210ENST00000547654 TNNI2P48788 182 aa6.62□□□□□ -1.35
SCAF11-210ENST00000547654 CHRNEQ04844 493 aa6.62□□□□□ -1.35
SCAF11-210ENST00000547654 SPPL2CQ8IUH8 684 aa6.62□□□□□ -1.35
SCAF11-210ENST00000547654 GIPC2Q8TF65 315 aa6.62□□□□□ -1.35
SCAF11-210ENST00000547654 RNF141Q8WVD5 230 aa6.62□□□□□ -1.35
SCAF11-210ENST00000547654 BCL2L13Q9BXK5 485 aa6.62□□□□□ -1.35
SCAF11-210ENST00000547654 BPNT1O95861 308 aa6.61□□□□□ -1.35
SCAF11-210ENST00000547654 PLCG1P19174 1290 aa6.61□□□□□ -1.35
SCAF11-210ENST00000547654 NR0B2Q15466 257 aa6.61□□□□□ -1.35
SCAF11-210ENST00000547654 TCERG1LQ5VWI1 586 aa6.61□□□□□ -1.35
SCAF11-210ENST00000547654 FBXL19Q6PCT2 694 aa6.61□□□□□ -1.35
SCAF11-210ENST00000547654 JARID2Q92833 1246 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-210ENST00000547654 RELTQ969Z4 430 aa6.61□□□□□ -1.35
SCAF11-210ENST00000547654 LRRC3Q9BY71 257 aa6.61□□□□□ -1.35
SCAF11-210ENST00000547654 TEX51A0A1B0GUA7 166 aa6.6□□□□□ -1.35
SCAF11-210ENST00000547654 MYOCOSA0A1B0GUC4 107 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms