RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 TRPA1O75762 1119 aa24.56■■□□□ 1.52
GPN3-205ENST00000547323 ANKRD23Q86SG2 305 aa24.56■■□□□ 1.52
GPN3-205ENST00000547323 IQCA1Q86XH1 822 aa24.56■■□□□ 1.52
GPN3-205ENST00000547323 CHMP4CQ96CF2 233 aa24.56■■□□□ 1.52
GPN3-205ENST00000547323 C12orf42Q96LP6 360 aa24.56■■□□□ 1.52
GPN3-205ENST00000547323 TMEM47Q9BQJ4 181 aa24.56■■□□□ 1.52
GPN3-205ENST00000547323 SH2D4AQ9H788 454 aa24.56■■□□□ 1.52
GPN3-205ENST00000547323 VCPKMTQ9H867 229 aa24.56■■□□□ 1.52
GPN3-205ENST00000547323 ENAHQ8N8S7 591 aaPredicted RBP24.55■■□□□ 1.52
GPN3-205ENST00000547323 NEK1Q96PY6 1258 aa24.55■■□□□ 1.52
GPN3-205ENST00000547323 R3HDMLQ9H3Y0 253 aa24.55■■□□□ 1.52
GPN3-205ENST00000547323 AGTPBP1Q9UPW5 1226 aa24.55■■□□□ 1.52
GPN3-205ENST00000547323 F5H6K3 240 aa24.54■■□□□ 1.52
GPN3-205ENST00000547323 VCAM1P19320 739 aa24.54■■□□□ 1.52
GPN3-205ENST00000547323 NT5C2P49902 561 aa24.54■■□□□ 1.52
GPN3-205ENST00000547323 KLRC3Q07444 240 aa24.54■■□□□ 1.52
GPN3-205ENST00000547323 OTUD7BQ6GQQ9 843 aa24.54■■□□□ 1.52
GPN3-205ENST00000547323 UBAC1Q9BSL1 405 aa24.54■■□□□ 1.52
GPN3-205ENST00000547323 SENP2Q9HC62 589 aa24.54■■□□□ 1.52
GPN3-205ENST00000547323 GPHNQ9NQX3 736 aaPredicted RBP24.54■■□□□ 1.52
GPN3-205ENST00000547323 TNKSO95271 1327 aa24.54■■□□□ 1.52
GPN3-205ENST00000547323 NDUFB10O96000 172 aa24.53■■□□□ 1.52
GPN3-205ENST00000547323 TOP1P11387 765 aaKnown RBP24.53■■□□□ 1.52
GPN3-205ENST00000547323 CPA1P15085 419 aa24.53■■□□□ 1.52
GPN3-205ENST00000547323 SEC23AQ15436 765 aa24.53■■□□□ 1.52
GPN3-205ENST00000547323 ANKS1AQ92625 1134 aa24.53■■□□□ 1.52
GPN3-205ENST00000547323 JAKMIP1Q96N16 626 aaKnown RBP24.53■■□□□ 1.52
GPN3-205ENST00000547323 TTC14Q96N46 770 aa24.53■■□□□ 1.52
GPN3-205ENST00000547323 NUP88Q99567 741 aaPredicted RBP24.53■■□□□ 1.52
GPN3-205ENST00000547323 GOPCQ9HD26 462 aa24.53■■□□□ 1.52
GPN3-205ENST00000547323 TSKSQ9UJT2 592 aa24.53■■□□□ 1.52
GPN3-205ENST00000547323 MTMR7Q9Y216 660 aa24.53■■□□□ 1.52
GPN3-205ENST00000547323 IFIT3O14879 490 aaKnown RBP24.52■■□□□ 1.52
GPN3-205ENST00000547323 PRC1O43663 620 aa24.52■■□□□ 1.52
GPN3-205ENST00000547323 TBC1D8O95759 1140 aa24.52■■□□□ 1.52
GPN3-205ENST00000547323 CYP2C8P10632 490 aa24.52■■□□□ 1.52
GPN3-205ENST00000547323 MCCP23508 829 aa24.52■■□□□ 1.52
GPN3-205ENST00000547323 MCM5P33992 734 aa24.52■■□□□ 1.52
GPN3-205ENST00000547323 KRT32Q14532 448 aa24.52■■□□□ 1.52
GPN3-205ENST00000547323 PPP4R3BQ5MIZ7 849 aa24.52■■□□□ 1.52
GPN3-205ENST00000547323 RASGRP2Q7LDG7 609 aa24.52■■□□□ 1.52
GPN3-205ENST00000547323 DGKHQ86XP1 1220 aa24.52■■□□□ 1.52
GPN3-205ENST00000547323 LRRC2Q9BYS8 371 aa24.52■■□□□ 1.52
GPN3-205ENST00000547323 RPAP3Q9H6T3 665 aaPredicted RBP24.52■■□□□ 1.52
GPN3-205ENST00000547323 EIF5BO60841 1220 aaKnown RBP24.51■■□□□ 1.51
GPN3-205ENST00000547323 CRHR2Q13324 411 aa24.51■■□□□ 1.51
GPN3-205ENST00000547323 TAF1CQ15572 869 aaPredicted RBP24.51■■□□□ 1.51
GPN3-205ENST00000547323 CCDC178Q5BJE1 867 aa24.51■■□□□ 1.51
GPN3-205ENST00000547323 SLFN13Q68D06 897 aa24.51■■□□□ 1.51
GPN3-205ENST00000547323 IGDCC4Q8TDY8 1250 aa24.51■■□□□ 1.51
GPN3-205ENST00000547323 LPAR1Q92633 364 aa24.51■■□□□ 1.51
GPN3-205ENST00000547323 TCEANC2Q96MN5 208 aa24.51■■□□□ 1.51
GPN3-205ENST00000547323 ALDH1A1P00352 501 aa24.5■■□□□ 1.51
GPN3-205ENST00000547323 HOXA7P31268 230 aaPredicted RBP24.5■■□□□ 1.51
GPN3-205ENST00000547323 EXOSC10Q01780 885 aaKnown RBP24.5■■□□□ 1.51
GPN3-205ENST00000547323 TMEM67Q5HYA8 995 aa24.5■■□□□ 1.51
GPN3-205ENST00000547323 FAM83BQ5T0W9 1011 aa24.5■■□□□ 1.51
GPN3-205ENST00000547323 GMCL1P1Q8NEA9 526 aa24.5■■□□□ 1.51
GPN3-205ENST00000547323 BEGAINQ9BUH8 593 aa24.5■■□□□ 1.51
GPN3-205ENST00000547323 ASCC2Q9H1I8 757 aaPredicted RBP24.5■■□□□ 1.51
GPN3-205ENST00000547323 ZCCHC17Q9NP64 241 aaKnown RBP24.5■■□□□ 1.51
GPN3-205ENST00000547323 SYNPO2Q9UMS6 1093 aa24.5■■□□□ 1.51
GPN3-205ENST00000547323 SLC45A1Q9Y2W3 748 aa24.5■■□□□ 1.51
GPN3-205ENST00000547323 USP17L15C9J2P7 530 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 USP17L13C9JLJ4 530 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 USP17L11C9JVI0 530 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 USP17L18D6R9N7 530 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 USP17L22D6RA61 530 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 USP17L17D6RBQ6 530 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 USP17L19D6RCP7 530 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 USP17L20D6RJB6 530 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 CA12O43570 354 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 USP17L24Q0WX57 530 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 CATSPERGQ6ZRH7 1159 aa24.49■■□□□ 1.51
GPN3-205ENST00000547323 DHX32Q7L7V1 743 aaKnown RBP24.49■■□□□ 1.51
GPN3-205ENST00000547323 P2RX7Q99572 595 aaKnown RBP24.49■■□□□ 1.51
GPN3-205ENST00000547323 WDR46O15213 610 aaKnown RBP24.48■■□□□ 1.51
GPN3-205ENST00000547323 HSPA1AP0DMV8 641 aaKnown RBP24.48■■□□□ 1.51
GPN3-205ENST00000547323 HSPA1BP0DMV9 641 aaKnown RBP24.48■■□□□ 1.51
GPN3-205ENST00000547323 RLFQ13129 1914 aa24.48■■□□□ 1.51
GPN3-205ENST00000547323 IFIT1BQ5T764 474 aaKnown RBP24.48■■□□□ 1.51
GPN3-205ENST00000547323 TANGO6Q9C0B7 1094 aa24.48■■□□□ 1.51
GPN3-205ENST00000547323 CASTP20810 708 aaKnown RBP24.47■■□□□ 1.51
GPN3-205ENST00000547323 OSBPP22059 807 aa24.47■■□□□ 1.51
GPN3-205ENST00000547323 PABPC4Q13310 644 aaKnown RBP eCLIP24.47■■□□□ 1.51
GPN3-205ENST00000547323 WTAPQ15007 396 aa24.47■■□□□ 1.51
GPN3-205ENST00000547323 SART3Q15020 963 aaKnown RBP24.47■■□□□ 1.51
GPN3-205ENST00000547323 PNMA1Q8ND90 353 aa24.47■■□□□ 1.51
GPN3-205ENST00000547323 BACH2Q9BYV9 841 aa24.47■■□□□ 1.51
GPN3-205ENST00000547323 KAT14Q9H8E8 782 aa24.47■■□□□ 1.51
GPN3-205ENST00000547323 LY9Q9HBG7 655 aa24.47■■□□□ 1.51
GPN3-205ENST00000547323 ZFYVE28Q9HCC9 887 aa24.47■■□□□ 1.51
GPN3-205ENST00000547323 FBXO28Q9NVF7 368 aa24.47■■□□□ 1.51
GPN3-205ENST00000547323 SAGE1Q9NXZ1 904 aa24.47■■□□□ 1.51
GPN3-205ENST00000547323 ERICH2A1L162 156 aa24.46■■□□□ 1.51
GPN3-205ENST00000547323 SH2B2O14492 632 aaPredicted RBP24.46■■□□□ 1.51
GPN3-205ENST00000547323 FOXN1O15353 648 aa24.46■■□□□ 1.51
GPN3-205ENST00000547323 IRX3P78415 501 aaPredicted RBP24.46■■□□□ 1.51
GPN3-205ENST00000547323 BLOC1S2Q6QNY1 142 aa24.46■■□□□ 1.51
GPN3-205ENST00000547323 POTEEQ6S8J3 1075 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms