RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 LONP1P36776 959 aaKnown RBP16.59■□□□□ 0.25
LETMD1-209ENST00000547318 TXLNAP40222 546 aa16.59■□□□□ 0.25
LETMD1-209ENST00000547318 GYG1P46976 350 aa16.59■□□□□ 0.25
LETMD1-209ENST00000547318 GNAQP50148 359 aa16.59■□□□□ 0.25
LETMD1-209ENST00000547318 MAP3K9P80192 1104 aa16.59■□□□□ 0.25
LETMD1-209ENST00000547318 PFKFB3Q16875 520 aaPredicted RBP16.59■□□□□ 0.25
LETMD1-209ENST00000547318 CCDC82Q8N4S0 544 aa16.59■□□□□ 0.25
LETMD1-209ENST00000547318 PDILTQ8N807 584 aa16.59■□□□□ 0.25
LETMD1-209ENST00000547318 FAM84BQ96KN1 310 aaPredicted RBP16.59■□□□□ 0.25
LETMD1-209ENST00000547318 URI1O94763 535 aaPredicted RBP16.58■□□□□ 0.25
LETMD1-209ENST00000547318 PBX1P40424 430 aa16.58■□□□□ 0.25
LETMD1-209ENST00000547318 ERCC6LQ2NKX8 1250 aa16.58■□□□□ 0.25
LETMD1-209ENST00000547318 CERS3Q8IU89 383 aa16.58■□□□□ 0.25
LETMD1-209ENST00000547318 GPR161Q8N6U8 529 aaKnown RBP16.58■□□□□ 0.25
LETMD1-209ENST00000547318 NSUN4Q96CB9 384 aaKnown RBP16.58■□□□□ 0.25
LETMD1-209ENST00000547318 ADD3Q9UEY8 706 aaKnown RBP16.58■□□□□ 0.25
LETMD1-209ENST00000547318 GTPBP6O43824 516 aaPredicted RBP16.58■□□□□ 0.24
LETMD1-209ENST00000547318 ARHGAP29Q52LW3 1261 aa16.58■□□□□ 0.24
LETMD1-209ENST00000547318 APTXQ7Z2E3 356 aaKnown RBP16.58■□□□□ 0.24
LETMD1-209ENST00000547318 CMTR1Q8N1G2 835 aaKnown RBP16.58■□□□□ 0.24
LETMD1-209ENST00000547318 MARCH10Q8NA82 808 aaPredicted RBP16.58■□□□□ 0.24
LETMD1-209ENST00000547318 ANKS1AQ92625 1134 aa16.58■□□□□ 0.24
LETMD1-209ENST00000547318 PRDM10Q9NQV6 1147 aa16.58■□□□□ 0.24
LETMD1-209ENST00000547318 RWDD2AQ9UIY3 292 aa16.58■□□□□ 0.24
LETMD1-209ENST00000547318 SPATA31A5Q5VU36 1347 aa16.58■□□□□ 0.24
LETMD1-209ENST00000547318 SPATA31A7Q8IWB4 1347 aa16.58■□□□□ 0.24
LETMD1-209ENST00000547318 BAZ2AQ9UIF9 1905 aaKnown RBP16.57■□□□□ 0.24
LETMD1-209ENST00000547318 LRRC10BA6NIK2 292 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 ADAMTS2O95450 1211 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 NPY5RQ15761 445 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 ERFEQ4G0M1 354 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 SAMSN1Q9NSI8 373 aaKnown RBP16.57■□□□□ 0.24
LETMD1-209ENST00000547318 LIMA1Q9UHB6 759 aaKnown RBP16.57■□□□□ 0.24
LETMD1-209ENST00000547318 MRFAP1Q9Y605 127 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 KAT6BQ8WYB5 2073 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 USP17L12C9JPN9 530 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 USP17L21D6R901 530 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 PLEKHA8P1O95397 391 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 NLRP5P59047 1200 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 GNG11P61952 73 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 TMCO3Q6UWJ1 677 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 DGKHQ86XP1 1220 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 SHISA4Q96DD7 197 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 DCP1AQ9NPI6 582 aaPredicted RBP16.57■□□□□ 0.24
LETMD1-209ENST00000547318 TAOK2Q9UL54 1235 aa16.57■□□□□ 0.24
LETMD1-209ENST00000547318 ROBO3Q96MS0 1386 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 PPP1R3GB7ZBB8 358 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 LAD1O00515 517 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 ATP2B1P20020 1258 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 PTGDRQ13258 359 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 E2F4Q16254 413 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 RC3H1Q5TC82 1133 aaKnown RBP16.56■□□□□ 0.24
LETMD1-209ENST00000547318 TAF3Q5VWG9 929 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 TRMT44Q8IYL2 757 aaKnown RBP16.56■□□□□ 0.24
LETMD1-209ENST00000547318 IGSF22Q8N9C0 903 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 EPSTI1Q96J88 318 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 MED15Q96RN5 788 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 MYO1AQ9UBC5 1043 aa16.56■□□□□ 0.24
LETMD1-209ENST00000547318 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.56■□□□□ 0.24
LETMD1-209ENST00000547318 TTF2Q9UNY4 1162 aaKnown RBP16.56■□□□□ 0.24
LETMD1-209ENST00000547318 V9GYY5 206 aaPredicted RBP16.56■□□□□ 0.24
LETMD1-209ENST00000547318 POTEB2H3BUK9 544 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 MFAP3LO75121 409 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 HIBADHP31937 336 aaKnown RBP16.55■□□□□ 0.24
LETMD1-209ENST00000547318 DYNLL1P63167 89 aaKnown RBP16.55■□□□□ 0.24
LETMD1-209ENST00000547318 ZNF827Q17R98 1081 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 USP49Q70CQ1 688 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 GRAMD1CQ8IYS0 662 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 DAGLBQ8NCG7 672 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 CCDC148Q8NFR7 591 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 RABGGTAQ92696 567 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 MAGEF1Q9HAY2 307 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 COL4A1P02462 1669 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 A0A087X0B3 334 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 CLCN6P51797 869 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 RPS8P62241 208 aaKnown RBP16.55■□□□□ 0.24
LETMD1-209ENST00000547318 MECOMQ03112 1051 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 ZNF658Q5TYW1 1059 aaPredicted RBP16.55■□□□□ 0.24
LETMD1-209ENST00000547318 PDXDC2PQ6P474 469 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 TMTC1Q8IUR5 882 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 AMOTL1Q8IY63 956 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 SRBD1Q8N5C6 995 aaKnown RBP16.55■□□□□ 0.24
LETMD1-209ENST00000547318 KIFC2Q96AC6 838 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 NLRP3Q96P20 1036 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 LZTS2Q9BRK4 669 aa16.55■□□□□ 0.24
LETMD1-209ENST00000547318 ZRANB2O95218 330 aaKnown RBP eCLIP16.54■□□□□ 0.24
LETMD1-209ENST00000547318 AFMP43652 599 aa16.54■□□□□ 0.24
LETMD1-209ENST00000547318 ADKP55263 362 aaKnown RBP16.54■□□□□ 0.24
LETMD1-209ENST00000547318 RASGRP2Q7LDG7 609 aa16.54■□□□□ 0.24
LETMD1-209ENST00000547318 CUEDC2Q9H467 287 aa16.54■□□□□ 0.24
LETMD1-209ENST00000547318 TCP11L1Q9NUJ3 509 aa16.54■□□□□ 0.24
LETMD1-209ENST00000547318 KIF5CO60282 957 aa16.53■□□□□ 0.24
LETMD1-209ENST00000547318 TUBBP07437 444 aa16.53■□□□□ 0.24
LETMD1-209ENST00000547318 PPP1R2P41236 205 aa16.53■□□□□ 0.24
LETMD1-209ENST00000547318 GSTO1P78417 241 aa16.53■□□□□ 0.24
LETMD1-209ENST00000547318 PPP2R3AQ06190 1150 aa16.53■□□□□ 0.24
LETMD1-209ENST00000547318 PAK1Q13153 545 aa16.53■□□□□ 0.24
LETMD1-209ENST00000547318 ZNF174Q15697 407 aa16.53■□□□□ 0.24
LETMD1-209ENST00000547318 EARS2Q5JPH6 523 aaKnown RBP16.53■□□□□ 0.24
LETMD1-209ENST00000547318 ZNF384Q8TF68 577 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms