RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 GTF3C2Q8WUA4 911 aaPredicted RBP12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 HERC5Q9UII4 1024 aaKnown RBP12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 ZBTB21Q9ULJ3 1066 aa12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 PHF24Q9UPV7 400 aa12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 HCN4Q9Y3Q4 1203 aa12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 PDS5AQ29RF7 1337 aaKnown RBP12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 FAM86C2PA6NEL3 165 aa12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 SPDYE16A6NNV3 312 aaPredicted RBP12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 COBLO75128 1261 aa12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 ADORA2AP29274 412 aa12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 IL15P40933 162 aaPredicted RBP12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 FAAP100Q0VG06 881 aa12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 OS9Q13438 667 aaPredicted RBP12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 POLA2Q14181 598 aa12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 ZGPATQ8N5A5 531 aaKnown RBP12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 SH3RF3Q8TEJ3 882 aaPredicted RBP12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 LENG1Q96BZ8 264 aaPredicted RBP12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 NSUN4Q96CB9 384 aaKnown RBP12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 SNX27Q96L92 541 aa12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 CXXC1Q9P0U4 656 aaPredicted RBP12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 TACC3Q9Y6A5 838 aa12.05□□□□□ -0.48
R3HDM2-210ENST00000547019 COL4A4P53420 1690 aaPredicted RBP12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 A0A1W2PQ45 241 aaPredicted RBP12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 A0A1W2PQY0 241 aa12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 IGFBP4P22692 258 aa12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 ATP8B2P98198 1209 aa12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 TMEM240Q5SV17 173 aa12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 OLFML2BQ68BL8 750 aa12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 TBC1D9Q6ZT07 1266 aa12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 METTL16Q86W50 562 aaKnown RBP12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 SSH3Q8TE77 659 aa12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 CRBNQ96SW2 442 aa12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 YBX2Q9Y2T7 364 aaKnown RBP12.04□□□□□ -0.48
R3HDM2-210ENST00000547019 HMMRO75330 724 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 PGK1P00558 417 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 VCAM1P19320 739 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 CCNA1P78396 465 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 G3BP1Q13283 466 aaKnown RBP eCLIP12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 LBX2Q6XYB7 198 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 CATSPERGQ6ZRH7 1159 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 SLF2Q8IX21 1173 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 TEX11Q8IYF3 940 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 NKX2-4Q9H2Z4 354 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 TMEM39AQ9NV64 488 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 PI4KBQ9UBF8 816 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 TBX21Q9UL17 535 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 SUPT16HQ9Y5B9 1047 aaKnown RBP12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 IVNS1ABPQ9Y6Y0 642 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 FLT1P17948 1338 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 MYH7P12883 1935 aa12.03□□□□□ -0.48
R3HDM2-210ENST00000547019 MCM3APO60318 1980 aa12.02□□□□□ -0.49
R3HDM2-210ENST00000547019 TIMM10P62072 90 aa12.02□□□□□ -0.49
R3HDM2-210ENST00000547019 TMEM31Q5JXX7 168 aa12.02□□□□□ -0.49
R3HDM2-210ENST00000547019 CCDC129Q6ZRS4 1044 aa12.02□□□□□ -0.49
R3HDM2-210ENST00000547019 ERICH6Q7L0X2 663 aa12.02□□□□□ -0.49
R3HDM2-210ENST00000547019 ADGRA1Q86SQ6 560 aa12.02□□□□□ -0.49
R3HDM2-210ENST00000547019 IL27Q8NEV9 243 aa12.02□□□□□ -0.49
R3HDM2-210ENST00000547019 ACER1Q8TDN7 264 aa12.02□□□□□ -0.49
R3HDM2-210ENST00000547019 MOV10L1Q9BXT6 1211 aaKnown RBP12.02□□□□□ -0.49
R3HDM2-210ENST00000547019 PALD1Q9ULE6 856 aa12.02□□□□□ -0.49
R3HDM2-210ENST00000547019 USP17L15C9J2P7 530 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 USP17L13C9JLJ4 530 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 USP17L11C9JVI0 530 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 USP17L18D6R9N7 530 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 USP17L22D6RA61 530 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 USP17L17D6RBQ6 530 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 USP17L19D6RCP7 530 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 USP17L20D6RJB6 530 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 SURF6O75683 361 aaKnown RBP12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 GLRX3O76003 335 aaKnown RBP12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 GH2P01242 217 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 ACRP10323 421 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 CSF2RAP15509 400 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 TAL1P17542 331 aaPredicted RBP12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 IRX5P78411 483 aaPredicted RBP12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 USP17L24Q0WX57 530 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 TFCP2Q12800 502 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 ANKRD33Q7Z3H0 272 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 DPP9Q86TI2 863 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 MAPKAPK5Q8IW41 473 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 RPAP2Q8IXW5 612 aaPredicted RBP12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 MICALL1Q8N3F8 863 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 XPNPEP3Q9NQH7 507 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 HMG20BQ9P0W2 317 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 BRWD1Q9NSI6 2320 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 ROBO3Q96MS0 1386 aa12.01□□□□□ -0.49
R3HDM2-210ENST00000547019 TIMP1P01033 207 aa12□□□□□ -0.49
R3HDM2-210ENST00000547019 SPTY2D1Q68D10 685 aaPredicted RBP12□□□□□ -0.49
R3HDM2-210ENST00000547019 ZNF365Q70YC5 407 aa12□□□□□ -0.49
R3HDM2-210ENST00000547019 SLC44A5Q8NCS7 719 aa12□□□□□ -0.49
R3HDM2-210ENST00000547019 TGFBRAP1Q8WUH2 860 aa12□□□□□ -0.49
R3HDM2-210ENST00000547019 XAGE2Q96GT9 111 aa12□□□□□ -0.49
R3HDM2-210ENST00000547019 MAML3Q96JK9 1138 aa12□□□□□ -0.49
R3HDM2-210ENST00000547019 AATFQ9NY61 560 aaKnown RBP eCLIP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms