RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 WDR19Q8NEZ3 1342 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 COL5A2P05997 1499 aaPredicted RBP8.87□□□□□ -0.99
UBR1-202ENST00000546274 VWA3AA6NCI4 1184 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 ERVV-2B6SEH9 535 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 ZNF202O95125 648 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 ADAMTS2O95450 1211 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 ZFYP08048 801 aaPredicted RBP8.87□□□□□ -0.99
UBR1-202ENST00000546274 TTC39AQ5SRH9 613 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 ARMCX6Q7L4S7 300 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 BRAPQ7Z569 592 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 APPBP2Q92624 585 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 SDF4Q9BRK5 362 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 CEP126Q9P2H0 1117 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 NUP98P52948 1817 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 PFKFB1P16118 471 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 CDC25CP30307 473 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 STK38Q15208 465 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 WASHC4Q2M389 1173 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 AIFM3Q96NN9 605 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 RGS17Q9UGC6 210 aaPredicted RBP8.87□□□□□ -0.99
UBR1-202ENST00000546274 PPP2R2CQ9Y2T4 447 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 WDR17Q8IZU2 1322 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 GPAA1O43292 621 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 ZSCAN12O43309 604 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 CSF1RP07333 972 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 PECAM1P16284 738 aaPredicted RBP8.87□□□□□ -0.99
UBR1-202ENST00000546274 MCAMP43121 646 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 ANO1Q5XXA6 986 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 TBC1D10CQ8IV04 446 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 TIAM2Q8IVF5 1701 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 NCOA7Q8NI08 942 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 ZCRB1Q8TBF4 217 aaKnown RBP8.87□□□□□ -0.99
UBR1-202ENST00000546274 USP21Q9UK80 565 aa8.87□□□□□ -0.99
UBR1-202ENST00000546274 BCORQ6W2J9 1755 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 LRP5O75197 1615 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 BIN1O00499 593 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 NDUFAB1O14561 156 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 COQ9O75208 318 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 KIF4AO95239 1232 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 CMA1P23946 247 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 LMOD1P29536 600 aaPredicted RBP8.86□□□□□ -0.99
UBR1-202ENST00000546274 RANBP1P43487 201 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 FNTAP49354 379 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 NLRP12P59046 1061 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 GNGT1P63211 74 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 TCIRG1Q13488 830 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 CCDC57Q2TAC2 916 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 DNAJC14Q6Y2X3 702 aaPredicted RBP8.86□□□□□ -0.99
UBR1-202ENST00000546274 CYB5R4Q7L1T6 521 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 HNRNPLLQ8WVV9 542 aaKnown RBP8.86□□□□□ -0.99
UBR1-202ENST00000546274 PLA2G12BQ9BX93 195 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 YIPF3Q9GZM5 350 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 HPSEQ9Y251 543 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 SLC39A14Q15043 492 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 PTPAQ15257 358 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 SRGAP1Q7Z6B7 1085 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 PDILTQ8N807 584 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 FAM76AQ8TAV0 307 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 LMBR1Q8WVP7 490 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 CCDC85AQ96PX6 553 aaPredicted RBP8.86□□□□□ -0.99
UBR1-202ENST00000546274 MAP3K14Q99558 947 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 CRACR2AQ9BSW2 395 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 DESI2Q9BSY9 194 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 GOPCQ9HD26 462 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 ZMYM6O95789 1325 aa8.86□□□□□ -0.99
UBR1-202ENST00000546274 TMCO5BA8MYB1 307 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 SYF2O95926 243 aaKnown RBP8.85□□□□□ -0.99
UBR1-202ENST00000546274 SLC3A2P08195 630 aaKnown RBP8.85□□□□□ -0.99
UBR1-202ENST00000546274 RXRBP28702 533 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 CCDC40Q4G0X9 1142 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 SHC4Q6S5L8 630 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.85□□□□□ -0.99
UBR1-202ENST00000546274 SYNE4Q8N205 404 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 FAM89AQ96GI7 184 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 POLD4Q9HCU8 107 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 TUBE1Q9UJT0 475 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 BCL9LQ86UU0 1499 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 ANKRD18BA2A2Z9 1011 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 ZNF213O14771 459 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 PCCAP05165 728 aaPredicted RBP8.85□□□□□ -0.99
UBR1-202ENST00000546274 MYBL1P10243 752 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 ATP1A3P13637 1013 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 CDC27P30260 824 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 AKAP17AQ02040 695 aaKnown RBP8.85□□□□□ -0.99
UBR1-202ENST00000546274 TRIM28Q13263 835 aaKnown RBP8.85□□□□□ -0.99
UBR1-202ENST00000546274 MTA1Q13330 715 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 WLSQ5T9L3 541 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 VGLL2Q8N8G2 317 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 NUP133Q8WUM0 1156 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 TMEM165Q9HC07 324 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 RIPOR2Q9Y4F9 1068 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 CDHR2Q9BYE9 1310 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 FAM237AA0A1B0GTK4 181 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 CUTAO60888 179 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 ADD2P35612 726 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 KCNJ6P48051 423 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 SNCBQ16143 134 aa8.85□□□□□ -0.99
UBR1-202ENST00000546274 TEX13AQ9BXU3 409 aaPredicted RBP8.85□□□□□ -0.99
UBR1-202ENST00000546274 CAPS2Q9BXY5 557 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms