RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 LRCH3Q96II8 777 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 NBPF3Q9H094 633 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 KIAA1683Q9H0B3 1180 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 OGDHLQ9ULD0 1010 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 MYH7P12883 1935 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 CYP2D7A0A087X1C5 515 aa13.97□□□□□ -0.17
NECAP1-209ENST00000546181 SPDYE16A6NNV3 312 aaPredicted RBP13.97□□□□□ -0.17
NECAP1-209ENST00000546181 IFIT2P09913 472 aaKnown RBP13.97□□□□□ -0.17
NECAP1-209ENST00000546181 XRCC5P13010 732 aaKnown RBP13.97□□□□□ -0.17
NECAP1-209ENST00000546181 RGS2P41220 211 aa13.97□□□□□ -0.17
NECAP1-209ENST00000546181 CLASRPQ8N2M8 674 aaKnown RBP13.97□□□□□ -0.17
NECAP1-209ENST00000546181 ANKLE1Q8NAG6 615 aa13.97□□□□□ -0.17
NECAP1-209ENST00000546181 KIF1BPQ96EK5 621 aa13.97□□□□□ -0.17
NECAP1-209ENST00000546181 APBA2Q99767 749 aa13.97□□□□□ -0.17
NECAP1-209ENST00000546181 CRNKL1Q9BZJ0 848 aaKnown RBP13.97□□□□□ -0.17
NECAP1-209ENST00000546181 BOLA2Q9H3K6 86 aa13.97□□□□□ -0.17
NECAP1-209ENST00000546181 C11orf49Q9H6J7 331 aa13.97□□□□□ -0.17
NECAP1-209ENST00000546181 CWC22Q9HCG8 908 aaKnown RBP13.97□□□□□ -0.17
NECAP1-209ENST00000546181 CABP5Q9NP86 173 aa13.97□□□□□ -0.17
NECAP1-209ENST00000546181 DCP1AQ9NPI6 582 aaPredicted RBP13.97□□□□□ -0.17
NECAP1-209ENST00000546181 ZBTB40Q9NUA8 1239 aa13.97□□□□□ -0.17
NECAP1-209ENST00000546181 RABGAP1Q9Y3P9 1069 aa13.97□□□□□ -0.17
NECAP1-209ENST00000546181 A0A0G2JMZ2 1700 aa13.96□□□□□ -0.17
NECAP1-209ENST00000546181 MBD4O95243 580 aa13.96□□□□□ -0.17
NECAP1-209ENST00000546181 USP14P54578 494 aa13.96□□□□□ -0.17
NECAP1-209ENST00000546181 MAP2K5Q13163 448 aa13.96□□□□□ -0.17
NECAP1-209ENST00000546181 TTF1Q15361 905 aaPredicted RBP13.96□□□□□ -0.17
NECAP1-209ENST00000546181 HSP90AB4PQ58FF6 505 aa13.96□□□□□ -0.17
NECAP1-209ENST00000546181 C20orf194Q5TEA3 1177 aa13.96□□□□□ -0.17
NECAP1-209ENST00000546181 CERS3Q8IU89 383 aa13.96□□□□□ -0.17
NECAP1-209ENST00000546181 NPLOC4Q8TAT6 608 aa13.96□□□□□ -0.17
NECAP1-209ENST00000546181 PARP14Q460N5 1801 aa13.95□□□□□ -0.18
NECAP1-209ENST00000546181 SMARCA5O60264 1052 aaPredicted RBP13.95□□□□□ -0.18
NECAP1-209ENST00000546181 AKR1B1P15121 316 aa13.95□□□□□ -0.18
NECAP1-209ENST00000546181 RPAP2Q8IXW5 612 aaPredicted RBP13.95□□□□□ -0.18
NECAP1-209ENST00000546181 GTF3C2Q8WUA4 911 aaPredicted RBP13.95□□□□□ -0.18
NECAP1-209ENST00000546181 PAG1Q9NWQ8 432 aa13.95□□□□□ -0.18
NECAP1-209ENST00000546181 PTPREP23469 700 aa13.94□□□□□ -0.18
NECAP1-209ENST00000546181 CYP2C19P33261 490 aa13.94□□□□□ -0.18
NECAP1-209ENST00000546181 ADD2P35612 726 aa13.94□□□□□ -0.18
NECAP1-209ENST00000546181 LRRC26Q2I0M4 334 aa13.94□□□□□ -0.18
NECAP1-209ENST00000546181 SIAH1Q8IUQ4 282 aa13.94□□□□□ -0.18
NECAP1-209ENST00000546181 SPICE1Q8N0Z3 855 aa13.94□□□□□ -0.18
NECAP1-209ENST00000546181 TRPV1Q8NER1 839 aa13.94□□□□□ -0.18
NECAP1-209ENST00000546181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.94□□□□□ -0.18
NECAP1-209ENST00000546181 GDF15Q99988 308 aa13.94□□□□□ -0.18
NECAP1-209ENST00000546181 TANGO6Q9C0B7 1094 aa13.94□□□□□ -0.18
NECAP1-209ENST00000546181 DDX19BQ9UMR2 479 aa13.94□□□□□ -0.18
NECAP1-209ENST00000546181 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
NECAP1-209ENST00000546181 HMMRO75330 724 aa13.93□□□□□ -0.18
NECAP1-209ENST00000546181 COL6A1P12109 1028 aa13.93□□□□□ -0.18
NECAP1-209ENST00000546181 CAPN2P17655 700 aa13.93□□□□□ -0.18
NECAP1-209ENST00000546181 MAGEA10P43363 369 aaPredicted RBP13.93□□□□□ -0.18
NECAP1-209ENST00000546181 CCNA1P78396 465 aa13.93□□□□□ -0.18
NECAP1-209ENST00000546181 LBX2Q6XYB7 198 aa13.93□□□□□ -0.18
NECAP1-209ENST00000546181 TRMT44Q8IYL2 757 aaKnown RBP13.93□□□□□ -0.18
NECAP1-209ENST00000546181 MOV10L1Q9BXT6 1211 aaKnown RBP13.93□□□□□ -0.18
NECAP1-209ENST00000546181 DNAH12Q6ZR08 3092 aa13.92□□□□□ -0.18
NECAP1-209ENST00000546181 SLC15A5A6NIM6 579 aa13.92□□□□□ -0.18
NECAP1-209ENST00000546181 ATP5JP18859 108 aa13.92□□□□□ -0.18
NECAP1-209ENST00000546181 CNGA1P29973 690 aa13.92□□□□□ -0.18
NECAP1-209ENST00000546181 GRB14Q14449 540 aa13.92□□□□□ -0.18
NECAP1-209ENST00000546181 KIF12Q96FN5 646 aa13.92□□□□□ -0.18
NECAP1-209ENST00000546181 USP17L12C9JPN9 530 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 USP17L21D6R901 530 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 RAB11FIP3O75154 756 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
NECAP1-209ENST00000546181 MS4A1P11836 297 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 NUBP1P53384 320 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 ATP2B2Q01814 1243 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 COG2Q14746 738 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 MFSD14CQ5VZR4 134 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 ANO1Q5XXA6 986 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 TMED8Q6PL24 325 aaPredicted RBP13.91□□□□□ -0.18
NECAP1-209ENST00000546181 TMEM179Q6ZVK1 233 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 ATG4CQ96DT6 458 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 HAUS7Q99871 368 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 RCAN3Q9UKA8 241 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 IVNS1ABPQ9Y6Y0 642 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 ZNF236Q9UL36 1845 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 ZNFX1Q9P2E3 1918 aaKnown RBP13.91□□□□□ -0.18
NECAP1-209ENST00000546181 COL6A3P12111 3177 aa13.91□□□□□ -0.18
NECAP1-209ENST00000546181 A0A1W2PPC1 479 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 COBLO75128 1261 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 ERCC3P19447 782 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 ADORA2AP29274 412 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 CDK8P49336 464 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 ATN1P54259 1190 aaPredicted RBP13.9□□□□□ -0.18
NECAP1-209ENST00000546181 MDM2Q00987 491 aaPredicted RBP13.9□□□□□ -0.18
NECAP1-209ENST00000546181 ICA1Q05084 483 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 PLS1Q14651 629 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 C12orf60Q5U649 245 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 TSHZ3Q63HK5 1081 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 Q7L0L9 218 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 STK11IPQ8N1F8 1099 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 SENP6Q9GZR1 1112 aaPredicted RBP13.9□□□□□ -0.18
NECAP1-209ENST00000546181 SPATC1LQ9H0A9 340 aa13.9□□□□□ -0.18
NECAP1-209ENST00000546181 PUS7LQ9H0K6 701 aaKnown RBP13.9□□□□□ -0.18
NECAP1-209ENST00000546181 DDX20Q9UHI6 824 aaKnown RBP13.9□□□□□ -0.18
NECAP1-209ENST00000546181 FLOT1O75955 427 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms