RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 FBXL16Q8N461 479 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 ACER1Q8TDN7 264 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 IGDCC4Q8TDY8 1250 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 TMEM47Q9BQJ4 181 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 KAT14Q9H8E8 782 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 LY9Q9HBG7 655 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 GOPCQ9HD26 462 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 CLIP2Q9UDT6 1046 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 A0A0G2JMZ2 1700 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 BAZ2BQ9UIF8 2168 aaKnown RBP12.62□□□□□ -0.39
PAAF1-216ENST00000546039 A0A0G2JLL6 359 aaPredicted RBP12.62□□□□□ -0.39
PAAF1-216ENST00000546039 A0A1W2PRG0 241 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 IRF6O14896 467 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 GTF2A2P52657 109 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 SNAPC2Q13487 334 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 Q6ZUG5 572 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 PRRT2Q7Z6L0 340 aaPredicted RBP12.62□□□□□ -0.39
PAAF1-216ENST00000546039 LRRC47Q8N1G4 583 aaKnown RBP12.62□□□□□ -0.39
PAAF1-216ENST00000546039 PNMA1Q8ND90 353 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 GMCL1P1Q8NEA9 526 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 LPAR1Q92633 364 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 C12orf42Q96LP6 360 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 LRRC2Q9BYS8 371 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 ALDH8A1Q9H2A2 487 aaPredicted RBP12.62□□□□□ -0.39
PAAF1-216ENST00000546039 VCPKMTQ9H867 229 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 PDRG1Q9NUG6 133 aa12.62□□□□□ -0.39
PAAF1-216ENST00000546039 CCDC69A6NI79 296 aa12.61□□□□□ -0.39
PAAF1-216ENST00000546039 FAM155AB1AL88 458 aaPredicted RBP12.61□□□□□ -0.39
PAAF1-216ENST00000546039 CETPP11597 493 aa12.61□□□□□ -0.39
PAAF1-216ENST00000546039 NEK4P51957 841 aa12.61□□□□□ -0.39
PAAF1-216ENST00000546039 HMGCS2P54868 508 aa12.61□□□□□ -0.39
PAAF1-216ENST00000546039 ANKRD1Q15327 319 aa12.61□□□□□ -0.39
PAAF1-216ENST00000546039 NFXL1Q6ZNB6 911 aa12.61□□□□□ -0.39
PAAF1-216ENST00000546039 PROCA1Q8NCQ7 364 aaPredicted RBP12.61□□□□□ -0.39
PAAF1-216ENST00000546039 CAPNS2Q96L46 248 aa12.61□□□□□ -0.39
PAAF1-216ENST00000546039 TMOD4Q9NZQ9 345 aa12.61□□□□□ -0.39
PAAF1-216ENST00000546039 MANSC4A6NHS7 340 aaPredicted RBP12.6□□□□□ -0.39
PAAF1-216ENST00000546039 WDR46O15213 610 aaKnown RBP12.6□□□□□ -0.39
PAAF1-216ENST00000546039 ST18O60284 1047 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 DDAH1O94760 285 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 NDUFB10O96000 172 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 MKRN3Q13064 507 aaKnown RBP12.6□□□□□ -0.39
PAAF1-216ENST00000546039 NOGQ13253 232 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
PAAF1-216ENST00000546039 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 CYP4F22Q6NT55 531 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 FASTKD5Q7L8L6 764 aaKnown RBP12.6□□□□□ -0.39
PAAF1-216ENST00000546039 CATIPQ7Z7H3 387 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 ZNF654Q8IZM8 581 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 BRF1Q92994 677 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 GMCL1Q96IK5 515 aa12.6□□□□□ -0.39
PAAF1-216ENST00000546039 GPHNQ9NQX3 736 aaPredicted RBP12.6□□□□□ -0.39
PAAF1-216ENST00000546039 RBBP6Q7Z6E9 1792 aaKnown RBP12.6□□□□□ -0.39
PAAF1-216ENST00000546039 NID2Q14112 1375 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 CCL15-CCL14A0A0B4J2E2 113 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 F5H6K3 240 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 RAD21O60216 631 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 CALM1P0DP23 149 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 CALM2P0DP24 149 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 CALM3P0DP25 149 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 VCAM1P19320 739 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 RCAN1P53805 252 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 AK2P54819 239 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 KLRC3Q07444 240 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 SREBF2Q12772 1141 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 TOB2Q14106 344 aaPredicted RBP12.59□□□□□ -0.39
PAAF1-216ENST00000546039 CCL15Q16663 113 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 APOA5Q6Q788 366 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 SYNE3Q6ZMZ3 975 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 GADL1Q6ZQY3 521 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 MAP3K14Q99558 947 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 SENP2Q9HC62 589 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 SLC12A7Q9Y666 1083 aa12.59□□□□□ -0.39
PAAF1-216ENST00000546039 KLF18A0A0U1RQI7 1052 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 TESPA1A2RU30 521 aaPredicted RBP12.58□□□□□ -0.4
PAAF1-216ENST00000546039 SNHG28P0DPA3 235 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 PDHBP11177 359 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 SLC1A4P43007 532 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 EVCP57679 992 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 INHBEP58166 350 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 APOBRQ0VD83 1088 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 GRM1Q13255 1194 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 PABPC4Q13310 644 aaKnown RBP eCLIP12.58□□□□□ -0.4
PAAF1-216ENST00000546039 ASPRV1Q53RT3 343 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 REM2Q8IYK8 340 aaPredicted RBP12.58□□□□□ -0.4
PAAF1-216ENST00000546039 BRI3BPQ8WY22 251 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
PAAF1-216ENST00000546039 WDR33Q9C0J8 1336 aaKnown RBP12.58□□□□□ -0.4
PAAF1-216ENST00000546039 MGAMO43451 1857 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 GOLGA8BA8MQT2 603 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 ZBTB43O43298 467 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 BMP3P12645 472 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 MCM2P49736 904 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms