RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-223ENST00000545605 PLEKHA8P1O95397 391 aa13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 DEXIO95424 95 aa13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 F13A1P00488 732 aa13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 SLURP2P0DP57 97 aa13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 GUCY1A2P33402 732 aa13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 HIRAP54198 1017 aaPredicted RBP13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 CDC37L1Q7L3B6 337 aa13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 NBPF11Q86T75 865 aa13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 LRRC47Q8N1G4 583 aaKnown RBP13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 LZTS2Q9BRK4 669 aa13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 CABP5Q9NP86 173 aa13.46□□□□□ -0.25
SCNN1A-223ENST00000545605 GH2P01242 217 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 ASNSP08243 561 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 PDHBP11177 359 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 EPHX2P34913 555 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 CAP2P40123 477 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 SSRP1Q08945 709 aaKnown RBP13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 SEPT2Q15019 361 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 GMCL1P1Q8NEA9 526 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 ZC3H15Q8WU90 426 aaKnown RBP13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 PHKBQ93100 1093 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 MKL1Q969V6 931 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 SPZ1Q9BXG8 430 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 ARHGEF10LQ9HCE6 1279 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 MAD2L2Q9UI95 211 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 ATP6V1DQ9Y5K8 247 aa13.45□□□□□ -0.26
SCNN1A-223ENST00000545605 PALM3A6NDB9 673 aaPredicted RBP13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 SMARCA1P28370 1054 aa13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 RRP1BQ14684 758 aaKnown RBP13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 SHROOM1Q2M3G4 852 aaPredicted RBP13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 DCAF4Q8WV16 495 aa13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 ALG1Q9BT22 464 aa13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 SLC26A6Q9BXS9 759 aa13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 ZNF341Q9BYN7 854 aa13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
SCNN1A-223ENST00000545605 DDX11L8A8MPP1 907 aa13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 PHF20L1A8MW92 1017 aa13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 H3BQV1 296 aa13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 PRPF3O43395 683 aaKnown RBP13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 EEF2P13639 858 aaKnown RBP13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 ZNF543Q08ER8 600 aa13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 IFFO2Q5TF58 517 aa13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 RASGRP2Q7LDG7 609 aa13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 FAM177A1Q8N128 213 aaPredicted RBP13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 DCPSQ96C86 337 aaKnown RBP13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 GMCL1Q96IK5 515 aa13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 CLIP2Q9UDT6 1046 aa13.43□□□□□ -0.26
SCNN1A-223ENST00000545605 CTNND1O60716 968 aaKnown RBP13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 DTNBO60941 627 aa13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 JAG1P78504 1218 aa13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 AKAP17AQ02040 695 aaKnown RBP13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 RESTQ13127 1097 aa13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 NOL9Q5SY16 702 aaKnown RBP13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 NBPF12Q5TAG4 269 aaPredicted RBP13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 PNMA8AQ86V59 439 aaPredicted RBP13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 SRBD1Q8N5C6 995 aaKnown RBP13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 FBXO18Q8NFZ0 1043 aa13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 ZSCAN16Q9H4T2 348 aaPredicted RBP13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 TAF1DQ9H5J8 278 aaPredicted RBP13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 ZNF112Q9UJU3 913 aa13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 RLFQ13129 1914 aa13.42□□□□□ -0.26
SCNN1A-223ENST00000545605 COL11A1P12107 1806 aaPredicted RBP13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 BAZ2BQ9UIF8 2168 aaKnown RBP13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 hCG_1984214I3L0E3 225 aa13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 BAG4O95429 457 aaKnown RBP13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 XBP1P17861 261 aa13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 PTMSP20962 102 aa13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 ATP2B2Q01814 1243 aa13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 TRIM29Q14134 588 aa13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 SUPT20HL1Q3ZLR7 823 aa13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 USP48Q86UV5 1035 aa13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 STAG2Q8N3U4 1231 aa13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 ZNF713Q8N859 430 aaPredicted RBP13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 SCAF8Q9UPN6 1271 aaKnown RBP13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 TMX2Q9Y320 296 aa13.41□□□□□ -0.26
SCNN1A-223ENST00000545605 ADM5C9JUS6 153 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 KLRF2D3W0D1 207 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 PPFIA3O75145 1194 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 SCG2P13521 617 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 NFKBIBQ15653 356 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 PKN1Q16512 942 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 PFKFB3Q16875 520 aaPredicted RBP13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 CCDC96Q2M329 555 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 USP17L2Q6R6M4 530 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 MIGA2Q7L4E1 593 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 SIAH1Q8IUQ4 282 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 CMTR1Q8N1G2 835 aaKnown RBP13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 AIFM3Q96NN9 605 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 WRNIP1Q96S55 665 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 GOPCQ9HD26 462 aa13.4□□□□□ -0.26
SCNN1A-223ENST00000545605 USP17L5A8MUK1 530 aa13.39□□□□□ -0.27
SCNN1A-223ENST00000545605 GOLGA6L22H0YM25 854 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms