RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 ICA1Q05084 483 aa13.39□□□□□ -0.27
SRRM4-203ENST00000545224 TRDNQ13061 729 aa13.39□□□□□ -0.27
SRRM4-203ENST00000545224 SPP2Q13103 211 aa13.39□□□□□ -0.27
SRRM4-203ENST00000545224 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
SRRM4-203ENST00000545224 DGKHQ86XP1 1220 aa13.39□□□□□ -0.27
SRRM4-203ENST00000545224 ENAHQ8N8S7 591 aaPredicted RBP13.39□□□□□ -0.27
SRRM4-203ENST00000545224 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
SRRM4-203ENST00000545224 JAKMIP1Q96N16 626 aaKnown RBP13.39□□□□□ -0.27
SRRM4-203ENST00000545224 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
SRRM4-203ENST00000545224 AGXT2Q9BYV1 514 aa13.39□□□□□ -0.27
SRRM4-203ENST00000545224 GPHNQ9NQX3 736 aaPredicted RBP13.39□□□□□ -0.27
SRRM4-203ENST00000545224 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
SRRM4-203ENST00000545224 A0A0G2JLL6 359 aaPredicted RBP13.38□□□□□ -0.27
SRRM4-203ENST00000545224 TTLL1O95922 423 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 MCCP23508 829 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 MCM5P33992 734 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 NOM1Q5C9Z4 860 aaKnown RBP13.38□□□□□ -0.27
SRRM4-203ENST00000545224 PRRT2Q7Z6L0 340 aaPredicted RBP13.38□□□□□ -0.27
SRRM4-203ENST00000545224 C12orf42Q96LP6 360 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 TMEM47Q9BQJ4 181 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 KIAA1683Q9H0B3 1180 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 AS3MTQ9HBK9 375 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 CLIP2Q9UDT6 1046 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 SYNPO2Q9UMS6 1093 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 TNKSO95271 1327 aa13.38□□□□□ -0.27
SRRM4-203ENST00000545224 C19orf81C9J6K1 198 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 USP17L10C9JJH3 530 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 SH2B2O14492 632 aaPredicted RBP13.37□□□□□ -0.27
SRRM4-203ENST00000545224 PRC1O43663 620 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 HMGB1P09429 215 aaKnown RBP13.37□□□□□ -0.27
SRRM4-203ENST00000545224 RPS6KB1P23443 525 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 PSMA5P28066 241 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 TM4SF4P48230 202 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 RUFY3Q7L099 469 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
SRRM4-203ENST00000545224 IQCA1Q86XH1 822 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 TCEANC2Q96MN5 208 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 PTPN18Q99952 460 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 ALDH8A1Q9H2A2 487 aaPredicted RBP13.37□□□□□ -0.27
SRRM4-203ENST00000545224 LY9Q9HBG7 655 aa13.37□□□□□ -0.27
SRRM4-203ENST00000545224 TRIM75PA6NK02 468 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 CASTP20810 708 aaKnown RBP13.36□□□□□ -0.27
SRRM4-203ENST00000545224 LIFRP42702 1097 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 CCDC178Q5BJE1 867 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 GPAT2Q6NUI2 795 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 BLOC1S2Q6QNY1 142 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 ZNF296Q8WUU4 475 aaPredicted RBP13.36□□□□□ -0.27
SRRM4-203ENST00000545224 BRI3BPQ8WY22 251 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 TMEM87BQ96K49 555 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 VCPKMTQ9H867 229 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 MYH4Q9Y623 1939 aa13.36□□□□□ -0.27
SRRM4-203ENST00000545224 IFIT3O14879 490 aaKnown RBP13.35□□□□□ -0.27
SRRM4-203ENST00000545224 SNHG28P0DPA3 235 aa13.35□□□□□ -0.27
SRRM4-203ENST00000545224 TOP1P11387 765 aaKnown RBP13.35□□□□□ -0.27
SRRM4-203ENST00000545224 GTF2A2P52657 109 aa13.35□□□□□ -0.27
SRRM4-203ENST00000545224 EVCP57679 992 aa13.35□□□□□ -0.27
SRRM4-203ENST00000545224 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
SRRM4-203ENST00000545224 MTMR2Q13614 643 aa13.35□□□□□ -0.27
SRRM4-203ENST00000545224 TOB2Q14106 344 aaPredicted RBP13.35□□□□□ -0.27
SRRM4-203ENST00000545224 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
SRRM4-203ENST00000545224 FBXO46Q6PJ61 603 aaPredicted RBP13.35□□□□□ -0.27
SRRM4-203ENST00000545224 SGMS1Q86VZ5 419 aa13.35□□□□□ -0.27
SRRM4-203ENST00000545224 GMCL1P1Q8NEA9 526 aa13.35□□□□□ -0.27
SRRM4-203ENST00000545224 UPF3BQ9BZI7 483 aaKnown RBP13.35□□□□□ -0.27
SRRM4-203ENST00000545224 ARHGEF10LQ9HCE6 1279 aa13.35□□□□□ -0.27
SRRM4-203ENST00000545224 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
SRRM4-203ENST00000545224 STX8Q9UNK0 236 aa13.35□□□□□ -0.27
SRRM4-203ENST00000545224 LOC285556D6RIA3 1793 aa13.35□□□□□ -0.27
SRRM4-203ENST00000545224 F5H6K3 240 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 GPR25O00155 361 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 NDUFB10O96000 172 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 USP14P54578 494 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 HMGCS2P54868 508 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 KLRC3Q07444 240 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 TROAPQ12815 778 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 SNAPC2Q13487 334 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 TMEM67Q5HYA8 995 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 Q6ZUG5 572 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 RASGRP2Q7LDG7 609 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 LRRC47Q8N1G4 583 aaKnown RBP13.34□□□□□ -0.27
SRRM4-203ENST00000545224 PROCA1Q8NCQ7 364 aaPredicted RBP13.34□□□□□ -0.27
SRRM4-203ENST00000545224 UBAC1Q9BSL1 405 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 CYP46A1Q9Y6A2 500 aa13.34□□□□□ -0.27
SRRM4-203ENST00000545224 MANSC4A6NHS7 340 aaPredicted RBP13.33□□□□□ -0.28
SRRM4-203ENST00000545224 BTBD19C9JJ37 291 aa13.33□□□□□ -0.28
SRRM4-203ENST00000545224 IGF2BP3O00425 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
SRRM4-203ENST00000545224 CETPP11597 493 aa13.33□□□□□ -0.28
SRRM4-203ENST00000545224 HOXA7P31268 230 aaPredicted RBP13.33□□□□□ -0.28
SRRM4-203ENST00000545224 SREBF2Q12772 1141 aa13.33□□□□□ -0.28
SRRM4-203ENST00000545224 WTAPQ15007 396 aa13.33□□□□□ -0.28
SRRM4-203ENST00000545224 TREML2Q5T2D2 321 aa13.33□□□□□ -0.28
SRRM4-203ENST00000545224 IFIT1BQ5T764 474 aaKnown RBP13.33□□□□□ -0.28
SRRM4-203ENST00000545224 POTEEQ6S8J3 1075 aa13.33□□□□□ -0.28
SRRM4-203ENST00000545224 PNMA1Q8ND90 353 aa13.33□□□□□ -0.28
SRRM4-203ENST00000545224 CFHR5Q9BXR6 569 aa13.33□□□□□ -0.28
SRRM4-203ENST00000545224 BRPF3Q9ULD4 1205 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms