RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TUBBP07437 444 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 ELF2Q15723 593 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 CDKAL1Q5VV42 579 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 TMEM139Q8IV31 216 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 TC2NQ8N9U0 490 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 KAT14Q9H8E8 782 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 DCP1AQ9NPI6 582 aaPredicted RBP14.78□□□□□ -0.04
CPSF7-223ENST00000544669 TCP11L1Q9NUJ3 509 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 NARFQ9UHQ1 456 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 RWDD2AQ9UIY3 292 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 MECOMQ03112 1051 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 FMR1Q06787 632 aaKnown RBP eCLIP14.78□□□□□ -0.04
CPSF7-223ENST00000544669 CUL4BQ13620 913 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 KMT5BQ4FZB7 885 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 TMCO3Q6UWJ1 677 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 GPR161Q8N6U8 529 aaKnown RBP14.78□□□□□ -0.04
CPSF7-223ENST00000544669 CCDC12Q8WUD4 166 aaPredicted RBP14.78□□□□□ -0.04
CPSF7-223ENST00000544669 CCDC47Q96A33 483 aaKnown RBP14.78□□□□□ -0.04
CPSF7-223ENST00000544669 ACSBG1Q96GR2 724 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 ARID3AQ99856 593 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 CUEDC2Q9H467 287 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 TTF2Q9UNY4 1162 aaKnown RBP14.78□□□□□ -0.04
CPSF7-223ENST00000544669 ECM29Q5VYK3 1845 aa14.77□□□□□ -0.04
CPSF7-223ENST00000544669 MYO5AQ9Y4I1 1855 aaKnown RBP14.77□□□□□ -0.05
CPSF7-223ENST00000544669 CNTNAP5Q8WYK1 1306 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 FOXN1O15353 648 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 GNG11P61952 73 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 MAP3K9P80192 1104 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 PTGDRQ13258 359 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 STIM1Q13586 685 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 TMTC1Q8IUR5 882 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 CMTR1Q8N1G2 835 aaKnown RBP14.77□□□□□ -0.05
CPSF7-223ENST00000544669 FAM53CQ9NYF3 392 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 MYO1AQ9UBC5 1043 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 LEMD3Q9Y2U8 911 aa14.77□□□□□ -0.05
CPSF7-223ENST00000544669 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 TMEM232C9JQI7 657 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 UBE2Q2LH0YL09 131 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 H7C1D1 291 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 KIF5CO60282 957 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 ZPR1O75312 459 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 RPS6KA4O75676 772 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 GRIN1Q05586 938 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 ORC2Q13416 577 aaPredicted RBP14.76□□□□□ -0.05
CPSF7-223ENST00000544669 ZNF658Q5TYW1 1059 aaPredicted RBP14.76□□□□□ -0.05
CPSF7-223ENST00000544669 TAF3Q5VWG9 929 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 IGSF22Q8N9C0 903 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 NOC3LQ8WTT2 800 aaKnown RBP14.76□□□□□ -0.05
CPSF7-223ENST00000544669 INTS13Q9NVM9 706 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 ADD3Q9UEY8 706 aaKnown RBP14.76□□□□□ -0.05
CPSF7-223ENST00000544669 LIMA1Q9UHB6 759 aaKnown RBP14.76□□□□□ -0.05
CPSF7-223ENST00000544669 VWA3AA6NCI4 1184 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 PLEKHA8P1O95397 391 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 SMARCA1P28370 1054 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 DYNLL1P63167 89 aaKnown RBP14.76□□□□□ -0.05
CPSF7-223ENST00000544669 ZNF174Q15697 407 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 ARHGAP29Q52LW3 1261 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 FBXO38Q6PIJ6 1188 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 DZIP1Q86YF9 867 aaKnown RBP14.76□□□□□ -0.05
CPSF7-223ENST00000544669 BLIDQ8IZY5 108 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 DAGLBQ8NCG7 672 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 EPSTI1Q96J88 318 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 SAMSN1Q9NSI8 373 aaKnown RBP14.76□□□□□ -0.05
CPSF7-223ENST00000544669 PCDHA4Q9UN74 947 aa14.76□□□□□ -0.05
CPSF7-223ENST00000544669 PPP1R3GB7ZBB8 358 aa14.75□□□□□ -0.05
CPSF7-223ENST00000544669 PRPHP41219 470 aa14.75□□□□□ -0.05
CPSF7-223ENST00000544669 AFMP43652 599 aa14.75□□□□□ -0.05
CPSF7-223ENST00000544669 ERCC6LQ2NKX8 1250 aa14.75□□□□□ -0.05
CPSF7-223ENST00000544669 NBPF5PQ86XG9 351 aaPredicted RBP14.75□□□□□ -0.05
CPSF7-223ENST00000544669 SRBD1Q8N5C6 995 aaKnown RBP14.75□□□□□ -0.05
CPSF7-223ENST00000544669 CEP112Q8N8E3 955 aa14.75□□□□□ -0.05
CPSF7-223ENST00000544669 IQCDQ96DY2 449 aa14.75□□□□□ -0.05
CPSF7-223ENST00000544669 AK8Q96MA6 479 aa14.75□□□□□ -0.05
CPSF7-223ENST00000544669 DNAJC5Q9H3Z4 198 aa14.75□□□□□ -0.05
CPSF7-223ENST00000544669 ROBO1Q9Y6N7 1651 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 CCDC194A0A1B0GVG4 234 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 FECHP22830 423 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 PBX1P40424 430 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 PAK1Q13153 545 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 KCNB1Q14721 858 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 E2F4Q16254 413 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 RABGGTAQ92696 567 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 PARP3Q9Y6F1 533 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 CACNA1SQ13698 1873 aa14.74□□□□□ -0.05
CPSF7-223ENST00000544669 TADA3O75528 432 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 PLCG2P16885 1265 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 PPP4CP60510 307 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 TSR1Q2NL82 804 aaKnown RBP14.73□□□□□ -0.05
CPSF7-223ENST00000544669 RRAGBQ5VZM2 374 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 WWC2Q6AWC2 1192 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 PIK3AP1Q6ZUJ8 805 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 RASGRP2Q7LDG7 609 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 SLF2Q8IX21 1173 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 ZNF444Q8N0Y2 327 aaPredicted RBP14.73□□□□□ -0.05
CPSF7-223ENST00000544669 CELF1Q92879 486 aaKnown RBP14.73□□□□□ -0.05
CPSF7-223ENST00000544669 ROBO3Q96MS0 1386 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 DLEC1Q9Y238 1755 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms