RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ZNF662Q6ZS27 426 aa8.04□□□□□ -1.12
CPSF7-222ENST00000544585 CNBD1Q8NA66 436 aa8.04□□□□□ -1.12
CPSF7-222ENST00000544585 PNMA5Q96PV4 448 aa8.04□□□□□ -1.12
CPSF7-222ENST00000544585 ZNF408Q9H9D4 720 aa8.04□□□□□ -1.12
CPSF7-222ENST00000544585 SALL4Q9UJQ4 1053 aa8.04□□□□□ -1.12
CPSF7-222ENST00000544585 STRIP2Q9ULQ0 834 aa8.04□□□□□ -1.12
CPSF7-222ENST00000544585 PCNTO95613 3336 aa8.04□□□□□ -1.12
CPSF7-222ENST00000544585 K7ELQ4 463 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-222ENST00000544585 FBXO24O75426 580 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 CLSTN1O94985 981 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 ALDH1B1P30837 517 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 EPHX2P34913 555 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 ECE1P42892 770 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 CTC1Q2NKJ3 1217 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 CCDC93Q567U6 631 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 FIGNL1Q6PIW4 674 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 CLEC4GQ6UXB4 293 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 TPTE2Q6XPS3 522 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 CPLX3Q8WVH0 158 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 EAF1Q96JC9 268 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-222ENST00000544585 GSX2Q9BZM3 304 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 CEP44Q9C0F1 390 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 ABCB6Q9NP58 842 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.03□□□□□ -1.12
CPSF7-222ENST00000544585 KNSTRNQ9Y448 316 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 SUPT16HQ9Y5B9 1047 aaKnown RBP8.03□□□□□ -1.12
CPSF7-222ENST00000544585 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-222ENST00000544585 KIF20BQ96Q89 1820 aa8.03□□□□□ -1.12
CPSF7-222ENST00000544585 CARMIL3Q8ND23 1372 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 KLRG2A4D1S0 409 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-222ENST00000544585 CCDC85CA6NKD9 419 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 FZD9O00144 591 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 U2SURPO15042 1029 aaKnown RBP8.02□□□□□ -1.13
CPSF7-222ENST00000544585 PSAPP07602 524 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 NPR1P16066 1061 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 MAP2K2P36507 400 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 MAP3K10Q02779 954 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 COL9A2Q14055 689 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-222ENST00000544585 MTHFSDQ2M296 383 aaKnown RBP8.02□□□□□ -1.13
CPSF7-222ENST00000544585 EGFLAMQ63HQ2 1017 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 ZNF790Q6PG37 636 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 GPC2Q8N158 579 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 JDP2Q8WYK2 163 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 OSMRQ99650 979 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 NT5C1AQ9BXI3 368 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 TRIM55Q9BYV6 548 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 GINM1Q9NU53 330 aa8.02□□□□□ -1.13
CPSF7-222ENST00000544585 ABT1Q9ULW3 272 aaKnown RBP8.02□□□□□ -1.13
CPSF7-222ENST00000544585 CCDC88AQ3V6T2 1871 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 ATXN7O15265 892 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-222ENST00000544585 FAM157BP0CG42 384 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 TEFQ10587 303 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 SFSWAPQ12872 951 aaKnown RBP8.01□□□□□ -1.13
CPSF7-222ENST00000544585 HYAL2Q12891 473 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 LBRQ14739 615 aaKnown RBP8.01□□□□□ -1.13
CPSF7-222ENST00000544585 MAP1SQ66K74 1059 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-222ENST00000544585 TRIM67Q6ZTA4 783 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 CCNJLQ8IV13 435 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 SYNE4Q8N205 404 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 ZNF496Q96IT1 587 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-222ENST00000544585 GPR101Q96P66 508 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-222ENST00000544585 FMNL2Q96PY5 1086 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 TCF12Q99081 682 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 ZKSCAN3Q9BRR0 538 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 DDX21Q9NR30 783 aaKnown RBP eCLIP8.01□□□□□ -1.13
CPSF7-222ENST00000544585 R3HCC1Q9Y3T6 440 aaKnown RBP8.01□□□□□ -1.13
CPSF7-222ENST00000544585 MRVI1Q9Y6F6 885 aa8.01□□□□□ -1.13
CPSF7-222ENST00000544585 GNAT3A8MTJ3 354 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 KHNYNO15037 678 aaKnown RBP8□□□□□ -1.13
CPSF7-222ENST00000544585 CAMTA2O94983 1202 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 HMOX1P09601 288 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 IARSP41252 1262 aaKnown RBP8□□□□□ -1.13
CPSF7-222ENST00000544585 SOX9P48436 509 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 LIG3P49916 1009 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 EIF6P56537 245 aaKnown RBP8□□□□□ -1.13
CPSF7-222ENST00000544585 FAM160A1Q05DH4 1040 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 SNAP47Q5SQN1 464 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 FBXL19Q6PCT2 694 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 ANKS3Q6ZW76 656 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 NBPF5PQ86XG9 351 aaPredicted RBP8□□□□□ -1.13
CPSF7-222ENST00000544585 PHC3Q8NDX5 983 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 MKL1Q969V6 931 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 RHOVQ96L33 236 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 ZNF277Q9NRM2 450 aaPredicted RBP8□□□□□ -1.13
CPSF7-222ENST00000544585 SIRPGQ9P1W8 387 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 ZNF652Q9Y2D9 606 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 NRXN2Q9P2S2 1712 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 ANKRD26Q9UPS8 1709 aa8□□□□□ -1.13
CPSF7-222ENST00000544585 HEG1Q9ULI3 1381 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 AFDNP55196 1824 aaKnown RBP7.99□□□□□ -1.13
CPSF7-222ENST00000544585 CA12O43570 354 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 DIAPH1O60610 1272 aaKnown RBP7.99□□□□□ -1.13
CPSF7-222ENST00000544585 PF4P02776 101 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 A1BGP04217 495 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 NFKB1P19838 968 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 SOX18P35713 384 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 ETFBP38117 255 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 PLAURQ03405 335 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 APOBRQ0VD83 1088 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 SERINC3Q13530 473 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms