RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CFAP100Q494V2 611 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 B4GALNT3Q6L9W6 998 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 ANKRD23Q86SG2 305 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 CCDC191Q8NCU4 936 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.26□□□□□ -1.57
SNHG1-220ENST00000544550 SNIP1Q8TAD8 396 aaKnown RBP5.26□□□□□ -1.57
SNHG1-220ENST00000544550 PAWRQ96IZ0 340 aaKnown RBP5.26□□□□□ -1.57
SNHG1-220ENST00000544550 ANKRD2Q9GZV1 360 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 CYLDQ9NQC7 956 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 HYPKQ9NX55 129 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 CHPF2Q9P2E5 772 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 DBF4Q9UBU7 674 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-220ENST00000544550 MINPP1Q9UNW1 487 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 RBM19Q9Y4C8 960 aaKnown RBP5.26□□□□□ -1.57
SNHG1-220ENST00000544550 HTTP42858 3142 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 BRCA2P51587 3418 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 CLSPNQ9HAW4 1339 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 PSME4Q14997 1843 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 TMEM229AB2RXF0 380 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 RNF225M0QZC1 329 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-220ENST00000544550 ADCY3O60266 1144 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 INHAP05111 366 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-220ENST00000544550 ADD1P35611 737 aaKnown RBP5.25□□□□□ -1.57
SNHG1-220ENST00000544550 IGHMBP2P38935 993 aaKnown RBP5.25□□□□□ -1.57
SNHG1-220ENST00000544550 KCNJ4P48050 445 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 PPIL2Q13356 520 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 CNGB1Q14028 1251 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-220ENST00000544550 MAFAQ8NHW3 353 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-220ENST00000544550 ZNF428Q96B54 188 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 PRMT6Q96LA8 375 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-220ENST00000544550 GUCD1Q96NT3 240 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 DEFB118Q96PH6 123 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 PARK7Q99497 189 aaKnown RBP5.25□□□□□ -1.57
SNHG1-220ENST00000544550 PAK6Q9NQU5 681 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-220ENST00000544550 PGPEP1Q9NXJ5 209 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 CPA4Q9UI42 421 aa5.25□□□□□ -1.57
SNHG1-220ENST00000544550 ZMYND8Q9ULU4 1186 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-220ENST00000544550 COL4A1P02462 1669 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 F8W031 263 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-220ENST00000544550 PDHXO00330 501 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 CTGFP29279 349 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 CTSWP56202 376 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 PPATQ06203 517 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 NNTQ13423 1086 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 DCAF15Q66K64 600 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 CYP2U1Q7Z449 544 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 TMEM151AQ8N4L1 468 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.24□□□□□ -1.572e-85■□□□□ 9.7
SNHG1-220ENST00000544550 C1orf216Q8TAB5 229 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 PLEKHF1Q96S99 279 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 MPHOSPH8Q99549 860 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 KLF16Q9BXK1 252 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-220ENST00000544550 C11orf49Q9H6J7 331 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 CD209Q9NNX6 404 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 ZNF358Q9NW07 568 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 CWC25Q9NXE8 425 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-220ENST00000544550 GNEQ9Y223 722 aaKnown RBP5.24□□□□□ -1.57
SNHG1-220ENST00000544550 WASF2Q9Y6W5 498 aa5.24□□□□□ -1.57
SNHG1-220ENST00000544550 TRIOBPQ9H2D6 2365 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 TMEM265A0A087WTH1 108 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 J3QL48 77 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 TNPO2O14787 897 aaKnown RBP5.23□□□□□ -1.57
SNHG1-220ENST00000544550 IGHA1P01876 353 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 IL1R1P14778 569 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 SYN1P17600 705 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 PPP2R1AP30153 589 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 FLT3LGP49771 235 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 GDF10P55107 478 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 OCLNQ16625 522 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 C15orf52Q6ZUT6 534 aaKnown RBP5.23□□□□□ -1.57
SNHG1-220ENST00000544550 ZNF804AQ7Z570 1209 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 TXNRD3Q86VQ6 643 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 CERS5Q8N5B7 392 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 TSEN2Q8NCE0 465 aaKnown RBP5.23□□□□□ -1.57
SNHG1-220ENST00000544550 COA7Q96BR5 231 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 FAM161BQ96MY7 647 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 TEPSINQ96N21 525 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 WRNIP1Q96S55 665 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 CDX2Q99626 313 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-220ENST00000544550 MYD88Q99836 296 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 CHMP4AQ9BY43 222 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.23□□□□□ -1.571e-6■■□□□ 14.4
SNHG1-220ENST00000544550 GZF1Q9H116 711 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-220ENST00000544550 ETNK1Q9HBU6 452 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 ZNF70Q9UC06 446 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-220ENST00000544550 SNCAIPQ9Y6H5 919 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 TAF1P21675 1872 aa5.23□□□□□ -1.57
SNHG1-220ENST00000544550 COL2A1P02458 1487 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-220ENST00000544550 TCP10L2B9ZVM9 353 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 BACH1O14867 736 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 DDX58O95786 925 aaKnown RBP5.22□□□□□ -1.57
SNHG1-220ENST00000544550 STAU1O95793 577 aaKnown RBP5.22□□□□□ -1.57
SNHG1-220ENST00000544550 HMGCRP04035 888 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 BCRP11274 1271 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 FOSL2P15408 326 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 WEE1P30291 646 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 RIPK4P57078 832 aa5.22□□□□□ -1.57
SNHG1-220ENST00000544550 FASTKD5Q7L8L6 764 aaKnown RBP5.22□□□□□ -1.57
SNHG1-220ENST00000544550 TAS1R3Q7RTX0 852 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms