RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 NOX5Q96PH1 765 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 NUP58Q9BVL2 599 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 ZMYM6O95789 1325 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 DKC1O60832 514 aaKnown RBP eCLIP14.23□□□□□ -0.131e-323■■■□□ 16.6
CHD4-211ENST00000544484 TUBB4BP68371 445 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 RRAGAQ7L523 313 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 PAGR1Q9BTK6 254 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 IGSF1Q8N6C5 1336 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 CEP104O60308 925 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 CD19P15391 556 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 RASA3Q14644 834 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 EAPPQ56P03 285 aaPredicted RBP14.23□□□□□ -0.13
CHD4-211ENST00000544484 TYW1BQ6NUM6 668 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 PI16Q6UXB8 463 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 TMTC1Q8IUR5 882 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 PLEKHA4Q9H4M7 779 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 ZNF804BA4D1E1 1349 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 PDIA3P30101 505 aaKnown RBP14.23□□□□□ -0.13
CHD4-211ENST00000544484 SCRN1Q12765 414 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 HDXQ7Z353 690 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 RNF34Q969K3 372 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 LSG1Q9H089 658 aaKnown RBP14.23□□□□□ -0.13
CHD4-211ENST00000544484 MBD5Q9P267 1494 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 ZNF589Q86UQ0 364 aaPredicted RBP14.22□□□□□ -0.13
CHD4-211ENST00000544484 ADCY9O60503 1353 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 ROBO2Q9HCK4 1378 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 NDC80O14777 642 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 ATP2A2P16615 1042 aaKnown RBP14.22□□□□□ -0.13
CHD4-211ENST00000544484 CERKLQ49MI3 558 aaPredicted RBP14.22□□□□□ -0.13
CHD4-211ENST00000544484 PPP1R21Q6ZMI0 780 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 KLHL7Q8IXQ5 586 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 EEF2KMTQ96G04 330 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 ATP8A2Q9NTI2 1148 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 ARHGAP6O43182 974 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 APBB1IPQ7Z5R6 666 aaPredicted RBP14.22□□□□□ -0.13
CHD4-211ENST00000544484 GPBP1Q86WP2 473 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 TIGD1Q96MW7 591 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 ERBB4Q15303 1308 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 H7C1D1 291 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 ANKS4BQ8N8V4 417 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 CHURC1Q8WUH1 139 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 IVLP07476 585 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 SCG2P13521 617 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 ERCC5P28715 1186 aaPredicted RBP14.22□□□□□ -0.13
CHD4-211ENST00000544484 ELF2Q15723 593 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 BRDTQ58F21 947 aaPredicted RBP14.22□□□□□ -0.13
CHD4-211ENST00000544484 NLRX1Q86UT6 975 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 MYO1AQ9UBC5 1043 aa14.22□□□□□ -0.13
CHD4-211ENST00000544484 CYP2J2P51589 502 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 GLG1Q92896 1179 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 TTC14Q96N46 770 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 IMPACTQ9P2X3 320 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 PCDHA12Q9UN75 941 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 CLIC4Q9Y696 253 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 LIN9Q5TKA1 542 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 FAM76AQ8TAV0 307 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 SMCR8Q8TEV9 937 aaPredicted RBP14.21□□□□□ -0.13
CHD4-211ENST00000544484 SSH2Q76I76 1423 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 BAG6P46379 1132 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 SLC8A3P57103 927 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 NBPF11Q86T75 865 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 CARD10Q9BWT7 1032 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 PCDHA7Q9UN72 937 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 EBAG9O00559 213 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 MAP4K1Q92918 833 aa14.21□□□□□ -0.13
CHD4-211ENST00000544484 ADGBQ8N7X0 1667 aa14.21□□□□□ -0.14
CHD4-211ENST00000544484 CYP21A2P08686 494 aa14.21□□□□□ -0.14
CHD4-211ENST00000544484 CCDC121Q6ZUS5 278 aa14.21□□□□□ -0.14
CHD4-211ENST00000544484 MIER3Q7Z3K6 550 aa14.21□□□□□ -0.14
CHD4-211ENST00000544484 ARFGAP2Q8N6H7 521 aa14.21□□□□□ -0.14
CHD4-211ENST00000544484 TNNI1P19237 187 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 DYNLL1P63167 89 aaKnown RBP14.2□□□□□ -0.14
CHD4-211ENST00000544484 ZNF365Q70YC5 407 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 HOOK2Q96ED9 719 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 NT5C3AQ9H0P0 336 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 ICA1Q05084 483 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 SFMBT2Q5VUG0 894 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 DCUN1D2Q6PH85 259 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 NAP1L3Q99457 506 aaPredicted RBP14.2□□□□□ -0.14
CHD4-211ENST00000544484 E7EVH7 732 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 MICALL1Q8N3F8 863 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 FAM196AQ6ZSG2 479 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 TRMT2AQ8IZ69 625 aaKnown RBP14.2□□□□□ -0.14
CHD4-211ENST00000544484 PODXL2Q9NZ53 605 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 THRAP3Q9Y2W1 955 aaKnown RBP14.2□□□□□ -0.14
CHD4-211ENST00000544484 EFCAB6Q5THR3 1501 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 M0R2C6 588 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 UBE3CQ15386 1083 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 DAAM2Q86T65 1068 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 FAM204AQ9H8W3 233 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 KDM6BO15054 1643 aa14.2□□□□□ -0.14
CHD4-211ENST00000544484 TRIM37O94972 964 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 TUBBP07437 444 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 NDUFA8P51970 172 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 UBL4BQ8N7F7 174 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 RABEP2Q9H5N1 569 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 STAP2Q9UGK3 403 aa14.19□□□□□ -0.14
CHD4-211ENST00000544484 STK24Q9Y6E0 443 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms