RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 NEDD1Q8NHV4 660 aa15.78■□□□□ 0.12
HCFC2-202ENST00000544223 POLR3EQ9NVU0 708 aa15.78■□□□□ 0.12
HCFC2-202ENST00000544223 BCS1LQ9Y276 419 aa15.78■□□□□ 0.12
HCFC2-202ENST00000544223 PTPAQ15257 358 aa15.78■□□□□ 0.12
HCFC2-202ENST00000544223 RBM28Q9NW13 759 aaKnown RBP15.78■□□□□ 0.12
HCFC2-202ENST00000544223 PIM2Q9P1W9 311 aa15.78■□□□□ 0.12
HCFC2-202ENST00000544223 ISY1Q9ULR0 285 aaKnown RBP15.78■□□□□ 0.12
HCFC2-202ENST00000544223 EGFRP00533 1210 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 CALM1P0DP23 149 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 CALM2P0DP24 149 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 CALM3P0DP25 149 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 SAFBQ15424 915 aaKnown RBP eCLIP15.77■□□□□ 0.12
HCFC2-202ENST00000544223 AXDND1Q5T1B0 1012 aaPredicted RBP15.77■□□□□ 0.12
HCFC2-202ENST00000544223 NLGN2Q8NFZ4 835 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 WASF1Q92558 559 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 FUCA2Q9BTY2 467 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 PHF20Q9BVI0 1012 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 KLRF2D3W0D1 207 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 PLCB2Q00722 1185 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 HEATR3Q7Z4Q2 680 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 GPCPD1Q9NPB8 672 aa15.77■□□□□ 0.12
HCFC2-202ENST00000544223 SCG2P13521 617 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 RASSF7Q02833 373 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 RRP1BQ14684 758 aaKnown RBP15.76■□□□□ 0.11
HCFC2-202ENST00000544223 MAP3K11Q16584 847 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 RBM26Q5T8P6 1007 aaKnown RBP15.76■□□□□ 0.11
HCFC2-202ENST00000544223 SLC16A10Q8TF71 515 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 CLSTN2Q9H4D0 955 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 MTMR4Q9NYA4 1195 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 SLC16A2P36021 539 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 RCAN1P53805 252 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 GRM4Q14833 912 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 SLC39A14Q15043 492 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 ISM2Q6H9L7 571 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 TTBK2Q6IQ55 1244 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 SHC4Q6S5L8 630 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 USP49Q70CQ1 688 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 RTKN2Q8IZC4 609 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 ENGASEQ8NFI3 743 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 VEZTQ9HBM0 779 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 SIPA1L1O43166 1804 aa15.76■□□□□ 0.11
HCFC2-202ENST00000544223 NLRP5P59047 1200 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 WWC2Q6AWC2 1192 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 RSBN1LQ6PCB5 846 aaPredicted RBP15.75■□□□□ 0.11
HCFC2-202ENST00000544223 PIK3AP1Q6ZUJ8 805 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 KCTD1Q719H9 257 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 ZNF287Q9HBT7 754 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 TCP11L1Q9NUJ3 509 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 POLD1P28340 1107 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 PRELPP51888 382 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 CXCL9Q07325 125 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 ZNF174Q15697 407 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 DALRD3Q5D0E6 543 aaKnown RBP15.75■□□□□ 0.11
HCFC2-202ENST00000544223 ADALQ6DHV7 355 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 CCDC73Q6ZRK6 1079 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 CERS3Q8IU89 383 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 MRPS27Q92552 414 aaKnown RBP15.75■□□□□ 0.11
HCFC2-202ENST00000544223 MTFR1LQ9H019 292 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 SERPINA10Q9UK55 444 aa15.75■□□□□ 0.11
HCFC2-202ENST00000544223 PALM3A6NDB9 673 aaPredicted RBP15.74■□□□□ 0.11
HCFC2-202ENST00000544223 NFKBIEO00221 500 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 PFKFB1P16118 471 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 KIF5BP33176 963 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 KRT2P35908 639 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 PFKFB3Q16875 520 aaPredicted RBP15.74■□□□□ 0.11
HCFC2-202ENST00000544223 SUPT20HQ8NEM7 779 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 KCNG4Q8TDN1 519 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 YEATS4O95619 227 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 HLA-DOAP06340 250 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 TYRO3Q06418 890 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 NBPF9Q3BBW0 867 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 MIGA2Q7L4E1 593 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 FMR1NBQ8N0W7 255 aaPredicted RBP15.74■□□□□ 0.11
HCFC2-202ENST00000544223 ANKS1AQ92625 1134 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 PIGSQ96S52 555 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 PSMD1Q99460 953 aa15.74■□□□□ 0.11
HCFC2-202ENST00000544223 FOXP1Q9H334 677 aaPredicted RBP15.74■□□□□ 0.11
HCFC2-202ENST00000544223 BIN1O00499 593 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 PARP1P09874 1014 aaKnown RBP15.73■□□□□ 0.11
HCFC2-202ENST00000544223 PDHBP11177 359 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 TAL1P17542 331 aaPredicted RBP15.73■□□□□ 0.11
HCFC2-202ENST00000544223 SNAP25P60880 206 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 FAM160A1Q05DH4 1040 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 SEPT2Q15019 361 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 ANO6Q4KMQ2 910 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 LUZP1Q86V48 1076 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 TMEM39BQ9GZU3 492 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 DNAJC25Q9H1X3 360 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 AP5Z1O43299 807 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 TOP1P11387 765 aaKnown RBP15.73■□□□□ 0.11
HCFC2-202ENST00000544223 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 NIM1KQ8IY84 436 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 PDILTQ8N807 584 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 CSRNP1Q96S65 589 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 NUP88Q99567 741 aaPredicted RBP15.73■□□□□ 0.11
HCFC2-202ENST00000544223 USP25Q9UHP3 1055 aa15.73■□□□□ 0.11
HCFC2-202ENST00000544223 ASTN2O75129 1339 aaPredicted RBP15.73■□□□□ 0.11
HCFC2-202ENST00000544223 SPDYE2BA6NHP3 402 aa15.72■□□□□ 0.11
HCFC2-202ENST00000544223 KINO60870 393 aaKnown RBP15.72■□□□□ 0.11
HCFC2-202ENST00000544223 SPDYE6P0CI01 402 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms