RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ZFYVE28Q9HCC9 887 aa17.82■□□□□ 0.44
CD9-210ENST00000543916 TCP11L1Q9NUJ3 509 aa17.82■□□□□ 0.44
CD9-210ENST00000543916 REC8O95072 547 aa17.81■□□□□ 0.44
CD9-210ENST00000543916 HOXA7P31268 230 aaPredicted RBP17.81■□□□□ 0.44
CD9-210ENST00000543916 LBX1P52954 281 aa17.81■□□□□ 0.44
CD9-210ENST00000543916 CYB5R4Q7L1T6 521 aa17.81■□□□□ 0.44
CD9-210ENST00000543916 SPICE1Q8N0Z3 855 aa17.81■□□□□ 0.44
CD9-210ENST00000543916 PARK7Q99497 189 aaKnown RBP17.81■□□□□ 0.44
CD9-210ENST00000543916 ZKSCAN3Q9BRR0 538 aa17.81■□□□□ 0.44
CD9-210ENST00000543916 ASCC2Q9H1I8 757 aaPredicted RBP17.81■□□□□ 0.44
CD9-210ENST00000543916 ZSWIM5Q9P217 1185 aa17.81■□□□□ 0.44
CD9-210ENST00000543916 STX8Q9UNK0 236 aa17.81■□□□□ 0.44
CD9-210ENST00000543916 ZSWIM8A7E2V4 1837 aa17.81■□□□□ 0.44
CD9-210ENST00000543916 A0A0G2JMZ2 1700 aa17.81■□□□□ 0.44
CD9-210ENST00000543916 NT5C2P49902 561 aa17.8■□□□□ 0.44
CD9-210ENST00000543916 PABPC4Q13310 644 aaKnown RBP eCLIP17.8■□□□□ 0.44
CD9-210ENST00000543916 RCSD1Q6JBY9 416 aa17.8■□□□□ 0.44
CD9-210ENST00000543916 LPAR1Q92633 364 aa17.8■□□□□ 0.44
CD9-210ENST00000543916 RPAP3Q9H6T3 665 aaPredicted RBP17.8■□□□□ 0.44
CD9-210ENST00000543916 GOPCQ9HD26 462 aa17.8■□□□□ 0.44
CD9-210ENST00000543916 F5H6K3 240 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 GPR25O00155 361 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 RAD21O60216 631 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 TLR2O60603 784 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 NDUFB10O96000 172 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 OSBPP22059 807 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 KLRC3Q07444 240 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 TRDNQ13061 729 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 COL9A3Q14050 684 aaPredicted RBP17.79■□□□□ 0.44
CD9-210ENST00000543916 PPP4R3BQ5MIZ7 849 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 CATSPERGQ6ZRH7 1159 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 RASEFQ8IZ41 740 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 NCOA7Q8NI08 942 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 PNMA3Q9UL41 463 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 SYNPO2Q9UMS6 1093 aa17.79■□□□□ 0.44
CD9-210ENST00000543916 USP17L15C9J2P7 530 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 USP17L13C9JLJ4 530 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 USP17L11C9JVI0 530 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 USP17L18D6R9N7 530 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 USP17L22D6RA61 530 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 USP17L17D6RBQ6 530 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 USP17L19D6RCP7 530 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 USP17L20D6RJB6 530 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 WDR46O15213 610 aaKnown RBP17.78■□□□□ 0.44
CD9-210ENST00000543916 IRX3P78415 501 aaPredicted RBP17.78■□□□□ 0.44
CD9-210ENST00000543916 USP17L24Q0WX57 530 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 NOM1Q5C9Z4 860 aaKnown RBP17.78■□□□□ 0.44
CD9-210ENST00000543916 RNF20Q5VTR2 975 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 RALYLQ86SE5 291 aaKnown RBP17.78■□□□□ 0.44
CD9-210ENST00000543916 IQCA1Q86XH1 822 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 MB21D2Q8IYB1 491 aaPredicted RBP17.78■□□□□ 0.44
CD9-210ENST00000543916 GMCL1P1Q8NEA9 526 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 ZSCAN10Q96SZ4 725 aaPredicted RBP17.78■□□□□ 0.44
CD9-210ENST00000543916 NUP88Q99567 741 aaPredicted RBP17.78■□□□□ 0.44
CD9-210ENST00000543916 P2RX7Q99572 595 aaKnown RBP17.78■□□□□ 0.44
CD9-210ENST00000543916 TMEM47Q9BQJ4 181 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 CPA4Q9UI42 421 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 CASP8AP2Q9UKL3 1982 aa17.78■□□□□ 0.44
CD9-210ENST00000543916 TNKSO95271 1327 aa17.77■□□□□ 0.44
CD9-210ENST00000543916 HSPA4P34932 840 aa17.77■□□□□ 0.44
CD9-210ENST00000543916 ANTXR2P58335 489 aa17.77■□□□□ 0.44
CD9-210ENST00000543916 FAM83BQ5T0W9 1011 aa17.77■□□□□ 0.44
CD9-210ENST00000543916 C17orf99Q6UX52 265 aa17.77■□□□□ 0.44
CD9-210ENST00000543916 RASGRP2Q7LDG7 609 aa17.77■□□□□ 0.44
CD9-210ENST00000543916 ENAHQ8N8S7 591 aaPredicted RBP17.77■□□□□ 0.44
CD9-210ENST00000543916 SMCR8Q8TEV9 937 aaPredicted RBP17.77■□□□□ 0.44
CD9-210ENST00000543916 ZNF296Q8WUU4 475 aaPredicted RBP17.77■□□□□ 0.44
CD9-210ENST00000543916 KCNB2Q92953 911 aa17.77■□□□□ 0.44
CD9-210ENST00000543916 TANGO6Q9C0B7 1094 aa17.77■□□□□ 0.44
CD9-210ENST00000543916 COL11A1P12107 1806 aaPredicted RBP17.77■□□□□ 0.43
CD9-210ENST00000543916 MGAMO43451 1857 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 BCRP11274 1271 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 TOP1P11387 765 aaKnown RBP17.76■□□□□ 0.43
CD9-210ENST00000543916 HERVK_113P62684 666 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 ADCK5Q3MIX3 580 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 TSGA10IPQ3SY00 556 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 SLFN13Q68D06 897 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 POTEEQ6S8J3 1075 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 CHST3Q7LGC8 479 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 CHMP4CQ96CF2 233 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 TTC14Q96N46 770 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 UBAC1Q9BSL1 405 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 USP26Q9BXU7 913 aa17.76■□□□□ 0.43
CD9-210ENST00000543916 EPB41L2O43491 1005 aaKnown RBP17.75■□□□□ 0.43
CD9-210ENST00000543916 PEX10O60683 326 aa17.75■□□□□ 0.43
CD9-210ENST00000543916 SEC23AQ15436 765 aa17.75■□□□□ 0.43
CD9-210ENST00000543916 C8orf34Q49A92 452 aa17.75■□□□□ 0.43
CD9-210ENST00000543916 CCDC178Q5BJE1 867 aa17.75■□□□□ 0.43
CD9-210ENST00000543916 DGKHQ86XP1 1220 aa17.75■□□□□ 0.43
CD9-210ENST00000543916 FBXO28Q9NVF7 368 aa17.75■□□□□ 0.43
CD9-210ENST00000543916 MTMR7Q9Y216 660 aa17.75■□□□□ 0.43
CD9-210ENST00000543916 SNX14Q9Y5W7 946 aa17.75■□□□□ 0.43
CD9-210ENST00000543916 SPDYE16A6NNV3 312 aaPredicted RBP17.74■□□□□ 0.43
CD9-210ENST00000543916 FKTNO75072 461 aa17.74■□□□□ 0.43
CD9-210ENST00000543916 SEC24BO95487 1268 aa17.74■□□□□ 0.43
CD9-210ENST00000543916 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
CD9-210ENST00000543916 CAP1Q01518 475 aa17.74■□□□□ 0.43
CD9-210ENST00000543916 SP3Q02447 781 aa17.74■□□□□ 0.43
CD9-210ENST00000543916 ANKRD13CQ8N6S4 541 aa17.74■□□□□ 0.43
CD9-210ENST00000543916 ANKS1AQ92625 1134 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms