RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 SIAH1Q8IUQ4 282 aa13.11□□□□□ -0.31
DDB1-222ENST00000543627 RAET1EQ8TD07 263 aa13.11□□□□□ -0.31
DDB1-222ENST00000543627 RUFY2Q8WXA3 655 aa13.11□□□□□ -0.31
DDB1-222ENST00000543627 TRIM47Q96LD4 638 aa13.11□□□□□ -0.31
DDB1-222ENST00000543627 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
DDB1-222ENST00000543627 BIN2Q9UBW5 565 aaPredicted RBP13.11□□□□□ -0.31
DDB1-222ENST00000543627 TMX2Q9Y320 296 aa13.11□□□□□ -0.31
DDB1-222ENST00000543627 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
DDB1-222ENST00000543627 LAMB1P07942 1786 aa13.11□□□□□ -0.31
DDB1-222ENST00000543627 PTPRFP10586 1907 aa13.11□□□□□ -0.31
DDB1-222ENST00000543627 ADGRA2Q96PE1 1338 aa13.11□□□□□ -0.31
DDB1-222ENST00000543627 SLC4A3P48751 1232 aa13.1□□□□□ -0.31
DDB1-222ENST00000543627 SOX10P56693 466 aa13.1□□□□□ -0.31
DDB1-222ENST00000543627 PLS1Q14651 629 aa13.1□□□□□ -0.31
DDB1-222ENST00000543627 ALX1Q15699 326 aa13.1□□□□□ -0.31
DDB1-222ENST00000543627 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
DDB1-222ENST00000543627 GPRC5AQ8NFJ5 357 aa13.1□□□□□ -0.31
DDB1-222ENST00000543627 COA7Q96BR5 231 aa13.1□□□□□ -0.31
DDB1-222ENST00000543627 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDB1-222ENST00000543627 VCPKMTQ9H867 229 aa13.1□□□□□ -0.31
DDB1-222ENST00000543627 STX8Q9UNK0 236 aa13.1□□□□□ -0.31
DDB1-222ENST00000543627 MYPNQ86TC9 1320 aa13.1□□□□□ -0.31
DDB1-222ENST00000543627 FLOT1O75955 427 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 SLC34A2O95436 690 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 CHMLP26374 656 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 PRKCZQ05513 592 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 FAM110CQ1W6H9 321 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 Q3C1V9 767 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 SLC9C1Q4G0N8 1177 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 FAM83BQ5T0W9 1011 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 MFSD6Q6ZSS7 791 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 LRRC47Q8N1G4 583 aaKnown RBP13.09□□□□□ -0.31
DDB1-222ENST00000543627 SH3TC2Q8TF17 1288 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 C12orf42Q96LP6 360 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 NUP88Q99567 741 aaPredicted RBP13.09□□□□□ -0.31
DDB1-222ENST00000543627 TXNRD2Q9NNW7 524 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 GABRQQ9UN88 632 aa13.09□□□□□ -0.31
DDB1-222ENST00000543627 ROBO3Q96MS0 1386 aa13.08□□□□□ -0.31
DDB1-222ENST00000543627 NMT2O60551 498 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 TTLL1O95922 423 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 COG2Q14746 738 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 NEDD1Q8NHV4 660 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 IL25Q9H293 177 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 MTMR4Q9NYA4 1195 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 HOXC10Q9NYD6 342 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 RBPJLQ9UBG7 517 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 SRRDQ9UH36 339 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
DDB1-222ENST00000543627 TACC3Q9Y6A5 838 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 ZSWIM8A7E2V4 1837 aa13.08□□□□□ -0.32
DDB1-222ENST00000543627 F5H6K3 240 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 GNRH1P01148 92 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 FLT3LGP49771 235 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 ERVK-24P63145 666 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 KLRC3Q07444 240 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
DDB1-222ENST00000543627 IMMTQ16891 758 aaKnown RBP13.07□□□□□ -0.32
DDB1-222ENST00000543627 AKNAD1Q5T1N1 836 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 KIAA1211Q6ZU35 1233 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 LPAR1Q92633 364 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 FBXO28Q9NVF7 368 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 NYAP2Q9P242 653 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 CTNNA3Q9UI47 895 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.07□□□□□ -0.32
DDB1-222ENST00000543627 LOC285556D6RIA3 1793 aa13.07□□□□□ -0.32
DDB1-222ENST00000543627 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
DDB1-222ENST00000543627 WDR46O15213 610 aaKnown RBP13.06□□□□□ -0.32
DDB1-222ENST00000543627 CYP2B6P20813 491 aa13.06□□□□□ -0.32
DDB1-222ENST00000543627 SLFN13Q68D06 897 aa13.06□□□□□ -0.32
DDB1-222ENST00000543627 TBC1D10CQ8IV04 446 aa13.06□□□□□ -0.32
DDB1-222ENST00000543627 GTF3C2Q8WUA4 911 aaPredicted RBP13.06□□□□□ -0.32
DDB1-222ENST00000543627 ATG4CQ96DT6 458 aa13.06□□□□□ -0.32
DDB1-222ENST00000543627 DSCC1Q9BVC3 393 aa13.06□□□□□ -0.32
DDB1-222ENST00000543627 RNF41Q9H4P4 317 aaPredicted RBP13.06□□□□□ -0.32
DDB1-222ENST00000543627 BTBD7Q9P203 1132 aa13.06□□□□□ -0.32
DDB1-222ENST00000543627 RABGAP1Q9Y3P9 1069 aa13.06□□□□□ -0.32
DDB1-222ENST00000543627 IGKV6D-41A0A0C4DH26 115 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 ORC4O43929 436 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 NDUFB10O96000 172 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 ELNP15502 786 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 MCCP23508 829 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 DSG3P32926 999 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 PRMT2P55345 433 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 CCNA1P78396 465 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 PTH1RQ03431 593 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 KIFC2Q96AC6 838 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 TMEM106CQ9BVX2 250 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 PORCNQ9H237 461 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 MORF4L1Q9UBU8 362 aa13.05□□□□□ -0.32
DDB1-222ENST00000543627 B4E1Z4 1266 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 ADCY3O60266 1144 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 CNMDO75829 334 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 MAPK4P31152 587 aa13.04□□□□□ -0.32
DDB1-222ENST00000543627 GRK4P32298 578 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms