RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 HERC4Q5GLZ8 1057 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 OTUD6AQ7L8S5 288 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 CCDC42Q96M95 316 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 TMX1Q9H3N1 280 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 VPS54Q9P1Q0 977 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 CCPG1Q9ULG6 757 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 FRMPD2Q68DX3 1309 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 CDK12Q9NYV4 1490 aaPredicted RBP7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 A0A1B0GVL5 298 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 OSBPP22059 807 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 DNAJA1P31689 397 aaKnown RBP7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 RAPGEF1Q13905 1077 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 SUSD4Q5VX71 490 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 COA1Q9GZY4 146 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 SPON1Q9HCB6 807 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 SERPINB13Q9UIV8 391 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 AXIN2Q9Y2T1 843 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 FSD2A1L4K1 749 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 MYZAPP0CAP1 466 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 ERCC3P19447 782 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 UBXN1Q04323 297 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 INF2Q27J81 1249 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 MIER3Q7Z3K6 550 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 UIMC1Q96RL1 719 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 DHX36Q9H2U1 1008 aaKnown RBP7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 ATG3Q9NT62 314 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 PLA2R1Q13018 1463 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 CETN3O15182 167 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 HSPD1P10809 573 aaKnown RBP7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 SMC1AQ14683 1233 aaKnown RBP7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 TSNARE1Q96NA8 513 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 ZSWIM4Q9H7M6 989 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 IKBKGQ9Y6K9 419 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 ERCC5P28715 1186 aaPredicted RBP7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 ZSCAN23Q3MJ62 389 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 TMCO3Q6UWJ1 677 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 METTL13Q8N6R0 699 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 LMBR1Q8WVP7 490 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 KCNH3Q9ULD8 1083 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 KCNJ14Q9UNX9 436 aa7.7□□□□□ -1.18
SRGAP1-206ENST00000543397 A0A0D9SFI3 127 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 KIAA0754O94854 1291 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 USP17L8P0C7I0 530 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 GNG11P61952 73 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 PLCB3Q01970 1234 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 SPICE1Q8N0Z3 855 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 MYCT1Q8N699 235 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 ATRIPQ8WXE1 791 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 C16orf45Q96MC5 204 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 SEC62Q99442 399 aaKnown RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 DBNLQ9UJU6 430 aaKnown RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 RNF123Q5XPI4 1314 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 FGAP02671 866 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 KRT5P13647 590 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 GPATCH4Q5T3I0 446 aaKnown RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 TPH2Q8IWU9 490 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 GOLGA1Q92805 767 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 SLC10A4Q96EP9 437 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 NT5C3AQ9H0P0 336 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 KANSL2Q9H9L4 492 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 BSDC1Q9NW68 430 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 ZNF500O60304 480 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 GOLGA8HP0CJ92 632 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 FANCBQ8NB91 859 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 NOX5Q96PH1 765 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 RYDENQ9NUL5 291 aaKnown RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 COL15A1P39059 1388 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 CALUO43852 315 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 KIF5AQ12840 1032 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 SNW1Q13573 536 aaKnown RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 RNF169Q8NCN4 708 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 KCNV2Q8TDN2 545 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 SELENOOQ9BVL4 669 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 ADCY10Q96PN6 1610 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 CRB1P82279 1406 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 NCAPD2Q15021 1401 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 PSDA5PKW4 1024 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 CUTAO60888 179 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 TACC1O75410 805 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 DEPTORQ8TB45 409 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 DDX12PQ92771 950 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 KIFAP3Q92845 792 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 AMNQ9BXJ7 453 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 TM6SF1Q9BZW5 370 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 NACA2Q9H009 215 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 PCDHA1Q9Y5I3 950 aa7.69□□□□□ -1.18
SRGAP1-206ENST00000543397 VGLL3A8MV65 326 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 HSPA4P34932 840 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 KRT83P78385 493 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 TYRO3Q06418 890 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 PRR16Q569H4 304 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 RNF181Q9P0P0 153 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 PI4KBQ9UBF8 816 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 LUC7L2Q9Y383 392 aaKnown RBP7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 CARMIL3Q8ND23 1372 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 EXOC3O60645 756 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 RAD51AP2Q09MP3 1159 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 BMS1Q14692 1282 aaKnown RBP7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 VPS72Q15906 364 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms