RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 LIMA1Q9UHB6 759 aaKnown RBP26.76■■□□□ 1.87
SHD-201ENST00000543264 SRGAP2O75044 1071 aa26.76■■□□□ 1.87
SHD-201ENST00000543264 ZMYND10O75800 440 aa26.76■■□□□ 1.87
SHD-201ENST00000543264 MBD4O95243 580 aa26.76■■□□□ 1.87
SHD-201ENST00000543264 CSF1RP07333 972 aa26.76■■□□□ 1.87
SHD-201ENST00000543264 SART3Q15020 963 aaKnown RBP26.76■■□□□ 1.87
SHD-201ENST00000543264 CTCFLQ8NI51 663 aaPredicted RBP26.76■■□□□ 1.87
SHD-201ENST00000543264 MMS19Q96T76 1030 aa26.76■■□□□ 1.87
SHD-201ENST00000543264 ERICH2A1L162 156 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 TRAPPC11Q7Z392 1133 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 CABLES1Q8TDN4 633 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 PPM1EQ8WY54 764 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 CAPZA3Q96KX2 299 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 HPCAL4Q9UM19 191 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 TFR2Q9UP52 801 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 REXO2Q9Y3B8 237 aaKnown RBP26.75■■□□□ 1.87
SHD-201ENST00000543264 RIC1Q4ADV7 1423 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 NDUFA10O95299 355 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 AARSP49588 968 aaKnown RBP eCLIP26.75■■□□□ 1.87
SHD-201ENST00000543264 FANCBQ8NB91 859 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 VPS54Q9P1Q0 977 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 JRKLQ9Y4A0 524 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 GLI3P10071 1580 aa26.75■■□□□ 1.87
SHD-201ENST00000543264 CCDC196A0A1B0GTZ2 297 aa26.74■■□□□ 1.87
SHD-201ENST00000543264 PRPF6O94906 941 aaKnown RBP26.74■■□□□ 1.87
SHD-201ENST00000543264 ITGA6P23229 1130 aa26.74■■□□□ 1.87
SHD-201ENST00000543264 hCG_1642624A0A1W2PR95 340 aa26.74■■□□□ 1.87
SHD-201ENST00000543264 LRRC10BA6NIK2 292 aa26.74■■□□□ 1.87
SHD-201ENST00000543264 MAGEB6Q8N7X4 407 aa26.74■■□□□ 1.87
SHD-201ENST00000543264 TTLL11Q8NHH1 800 aa26.74■■□□□ 1.87
SHD-201ENST00000543264 GREM2Q9H772 168 aa26.74■■□□□ 1.87
SHD-201ENST00000543264 PRKAB2O43741 272 aa26.73■■□□□ 1.87
SHD-201ENST00000543264 PCCAP05165 728 aaPredicted RBP26.73■■□□□ 1.87
SHD-201ENST00000543264 IRX3P78415 501 aaPredicted RBP26.73■■□□□ 1.87
SHD-201ENST00000543264 UBXN1Q04323 297 aa26.73■■□□□ 1.87
SHD-201ENST00000543264 MAP9Q49MG5 647 aa26.73■■□□□ 1.87
SHD-201ENST00000543264 WNT7AO00755 349 aa26.73■■□□□ 1.87
SHD-201ENST00000543264 ATP1A1P05023 1023 aaKnown RBP26.73■■□□□ 1.87
SHD-201ENST00000543264 STIM1Q13586 685 aa26.73■■□□□ 1.87
SHD-201ENST00000543264 ZNF174Q15697 407 aa26.73■■□□□ 1.87
SHD-201ENST00000543264 ANKRD20A12PQ8NF67 263 aa26.73■■□□□ 1.87
SHD-201ENST00000543264 SMARCC1Q92922 1105 aaPredicted RBP26.73■■□□□ 1.87
SHD-201ENST00000543264 SHISA4Q96DD7 197 aa26.73■■□□□ 1.87
SHD-201ENST00000543264 KCNJ18B7U540 433 aa26.72■■□□□ 1.87
SHD-201ENST00000543264 KCNJ12Q14500 433 aa26.72■■□□□ 1.87
SHD-201ENST00000543264 DNAJC21Q5F1R6 531 aaKnown RBP26.72■■□□□ 1.87
SHD-201ENST00000543264 TCP11X2Q5H9J9 407 aa26.72■■□□□ 1.87
SHD-201ENST00000543264 ZNF512BQ96KM6 892 aaPredicted RBP26.72■■□□□ 1.87
SHD-201ENST00000543264 MAPK8IP1Q9UQF2 711 aa26.72■■□□□ 1.87
SHD-201ENST00000543264 SAR1BQ9Y6B6 198 aa26.72■■□□□ 1.87
SHD-201ENST00000543264 ZNF654Q8IZM8 581 aa26.72■■□□□ 1.87
SHD-201ENST00000543264 PKD1L3Q7Z443 1732 aa26.72■■□□□ 1.87
SHD-201ENST00000543264 PRDM1O75626 825 aa26.71■■□□□ 1.87
SHD-201ENST00000543264 GGCXP38435 758 aa26.71■■□□□ 1.87
SHD-201ENST00000543264 TDO2P48775 406 aa26.71■■□□□ 1.87
SHD-201ENST00000543264 TRIM14Q14142 442 aa26.71■■□□□ 1.87
SHD-201ENST00000543264 GSG1L2A8MUP6 293 aa26.71■■□□□ 1.87
SHD-201ENST00000543264 MCM3P25205 808 aa26.71■■□□□ 1.87
SHD-201ENST00000543264 GSPT2Q8IYD1 628 aaKnown RBP26.71■■□□□ 1.87
SHD-201ENST00000543264 COG1Q8WTW3 980 aa26.71■■□□□ 1.87
SHD-201ENST00000543264 PSMD14O00487 310 aa26.7■■□□□ 1.87
SHD-201ENST00000543264 CCDC122Q5T0U0 273 aa26.7■■□□□ 1.87
SHD-201ENST00000543264 ZBTB38Q8NAP3 1195 aaPredicted RBP26.7■■□□□ 1.87
SHD-201ENST00000543264 PES1O00541 588 aaKnown RBP26.7■■□□□ 1.86
SHD-201ENST00000543264 SPAG1Q07617 926 aa26.7■■□□□ 1.86
SHD-201ENST00000543264 PAK1Q13153 545 aa26.7■■□□□ 1.86
SHD-201ENST00000543264 NELFBQ8WX92 580 aa26.7■■□□□ 1.86
SHD-201ENST00000543264 DDX17Q92841 729 aaKnown RBP26.7■■□□□ 1.86
SHD-201ENST00000543264 FERMT2Q96AC1 680 aa26.7■■□□□ 1.86
SHD-201ENST00000543264 CRACR2AQ9BSW2 395 aa26.7■■□□□ 1.86
SHD-201ENST00000543264 HAUS4Q9H6D7 363 aa26.7■■□□□ 1.86
SHD-201ENST00000543264 RWDD2AQ9UIY3 292 aa26.7■■□□□ 1.86
SHD-201ENST00000543264 XDHP47989 1333 aa26.7■■□□□ 1.86
SHD-201ENST00000543264 NID2Q14112 1375 aa26.69■■□□□ 1.86
SHD-201ENST00000543264 TTC26A0AVF1 554 aa26.69■■□□□ 1.86
SHD-201ENST00000543264 KRT2P35908 639 aa26.69■■□□□ 1.86
SHD-201ENST00000543264 HELBQ8NG08 1087 aaPredicted RBP26.69■■□□□ 1.86
SHD-201ENST00000543264 PLA2G12BQ9BX93 195 aa26.69■■□□□ 1.86
SHD-201ENST00000543264 XBP1P17861 261 aa26.69■■□□□ 1.86
SHD-201ENST00000543264 HINFPQ9BQA5 517 aa26.69■■□□□ 1.86
SHD-201ENST00000543264 CDHR2Q9BYE9 1310 aa26.69■■□□□ 1.86
SHD-201ENST00000543264 ZC3H4Q9UPT8 1303 aaKnown RBP26.69■■□□□ 1.86
SHD-201ENST00000543264 PDE8BO95263 885 aa26.68■■□□□ 1.86
SHD-201ENST00000543264 GPTP24298 496 aa26.68■■□□□ 1.86
SHD-201ENST00000543264 TMTC2Q8N394 836 aa26.68■■□□□ 1.86
SHD-201ENST00000543264 OR8K1Q8NGG5 319 aa26.68■■□□□ 1.86
SHD-201ENST00000543264 ANKRD18BA2A2Z9 1011 aa26.68■■□□□ 1.86
SHD-201ENST00000543264 EFCAB13Q8IY85 973 aa26.68■■□□□ 1.86
SHD-201ENST00000543264 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.67■■□□□ 1.86
SHD-201ENST00000543264 VGLL2Q8N8G2 317 aa26.67■■□□□ 1.86
SHD-201ENST00000543264 STAG1Q8WVM7 1258 aa26.67■■□□□ 1.86
SHD-201ENST00000543264 TRPM3Q9HCF6 1732 aaPredicted RBP26.67■■□□□ 1.86
SHD-201ENST00000543264 LRP6O75581 1613 aa26.67■■□□□ 1.86
SHD-201ENST00000543264 MYBL2P10244 700 aa26.67■■□□□ 1.86
SHD-201ENST00000543264 HERVK_113P62684 666 aa26.67■■□□□ 1.86
SHD-201ENST00000543264 CAGE1Q8TC20 777 aa26.67■■□□□ 1.86
SHD-201ENST00000543264 DRC1Q96MC2 740 aa26.67■■□□□ 1.86
SHD-201ENST00000543264 UBAC1Q9BSL1 405 aa26.67■■□□□ 1.86
SHD-201ENST00000543264 LUC7L2Q9Y383 392 aaKnown RBP26.67■■□□□ 1.86
SHD-201ENST00000543264 SLC4A4Q9Y6R1 1079 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms