RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 DTWD2Q8NBA8 298 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 PIWIL2Q8TC59 973 aaKnown RBP6.47□□□□□ -1.37
MDM2-229ENST00000543046 ASB11Q8WXH4 323 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 FBXL18Q96ME1 805 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 TM9SF2Q99805 663 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 PAK6Q9NQU5 681 aaPredicted RBP6.47□□□□□ -1.37
MDM2-229ENST00000543046 KCNH3Q9ULD8 1083 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 PITPNM2Q9BZ72 1349 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 CLEC3AO75596 197 aa6.46□□□□□ -1.38
MDM2-229ENST00000543046 CD8BP10966 210 aa6.46□□□□□ -1.38
MDM2-229ENST00000543046 GIPRP48546 466 aa6.46□□□□□ -1.38
MDM2-229ENST00000543046 RNF4P78317 190 aa6.46□□□□□ -1.38
MDM2-229ENST00000543046 RUFY4Q6ZNE9 571 aa6.46□□□□□ -1.38
MDM2-229ENST00000543046 VPS37DQ86XT2 251 aa6.46□□□□□ -1.38
MDM2-229ENST00000543046 TP53INP2Q8IXH6 220 aa6.46□□□□□ -1.38
MDM2-229ENST00000543046 TMEM192Q8IY95 271 aa6.46□□□□□ -1.38
MDM2-229ENST00000543046 CPLX3Q8WVH0 158 aa6.46□□□□□ -1.38
MDM2-229ENST00000543046 SEMA3GQ9NS98 782 aa6.46□□□□□ -1.38
MDM2-229ENST00000543046 FAM86C2PA6NEL3 165 aa6.45□□□□□ -1.38
MDM2-229ENST00000543046 GUCY2CP25092 1073 aa6.45□□□□□ -1.38
MDM2-229ENST00000543046 THAP5Q7Z6K1 395 aa6.45□□□□□ -1.38
MDM2-229ENST00000543046 OR6P1Q8NGX9 317 aa6.45□□□□□ -1.38
MDM2-229ENST00000543046 SHDQ96IW2 340 aa6.45□□□□□ -1.38
MDM2-229ENST00000543046 SLC6A18Q96N87 628 aa6.45□□□□□ -1.38
MDM2-229ENST00000543046 ZSWIM5Q9P217 1185 aa6.45□□□□□ -1.38
MDM2-229ENST00000543046 STRIP2Q9ULQ0 834 aa6.45□□□□□ -1.38
MDM2-229ENST00000543046 NBPF12Q5TAG4 269 aaPredicted RBP6.44□□□□□ -1.38
MDM2-229ENST00000543046 ANGEL2Q5VTE6 544 aaKnown RBP6.44□□□□□ -1.38
MDM2-229ENST00000543046 AGBL5Q8NDL9 886 aa6.44□□□□□ -1.38
MDM2-229ENST00000543046 UBE2FQ969M7 185 aa6.44□□□□□ -1.38
MDM2-229ENST00000543046 ZNF512BQ96KM6 892 aaPredicted RBP6.44□□□□□ -1.38
MDM2-229ENST00000543046 DUSP15Q9H1R2 295 aaPredicted RBP6.44□□□□□ -1.38
MDM2-229ENST00000543046 ATP13A1Q9HD20 1204 aa6.44□□□□□ -1.38
MDM2-229ENST00000543046 OAS3Q9Y6K5 1087 aaKnown RBP6.44□□□□□ -1.38
MDM2-229ENST00000543046 SRFP11831 508 aa6.43□□□□□ -1.38
MDM2-229ENST00000543046 IKZF1Q13422 519 aa6.43□□□□□ -1.38
MDM2-229ENST00000543046 ZYXQ15942 572 aaKnown RBP6.43□□□□□ -1.38
MDM2-229ENST00000543046 XP32Q5T750 250 aa6.43□□□□□ -1.38
MDM2-229ENST00000543046 UNC5AQ6ZN44 842 aa6.43□□□□□ -1.38
MDM2-229ENST00000543046 ABI1Q8IZP0 508 aa6.43□□□□□ -1.38
MDM2-229ENST00000543046 DHRS1Q96LJ7 313 aa6.43□□□□□ -1.38
MDM2-229ENST00000543046 GPR62Q9BZJ7 368 aa6.43□□□□□ -1.38
MDM2-229ENST00000543046 TRIT1Q9H3H1 467 aaKnown RBP6.43□□□□□ -1.38
MDM2-229ENST00000543046 GPATCH2Q9NW75 528 aa6.43□□□□□ -1.38
MDM2-229ENST00000543046 SUCOQ9UBS9 1254 aaKnown RBP6.43□□□□□ -1.38
MDM2-229ENST00000543046 WASH4PA8MWX3 477 aa6.42□□□□□ -1.38
MDM2-229ENST00000543046 SSBP05455 408 aaKnown RBP eCLIP6.42□□□□□ -1.38
MDM2-229ENST00000543046 FUT4P22083 530 aa6.42□□□□□ -1.38
MDM2-229ENST00000543046 DNAJA1P31689 397 aaKnown RBP6.42□□□□□ -1.38
MDM2-229ENST00000543046 ZC3H6P61129 1189 aaKnown RBP6.42□□□□□ -1.38
MDM2-229ENST00000543046 ARID5AQ03989 594 aa6.42□□□□□ -1.38
MDM2-229ENST00000543046 PLCL1Q15111 1095 aa6.42□□□□□ -1.38
MDM2-229ENST00000543046 NBPF9Q3BBW0 867 aa6.42□□□□□ -1.38
MDM2-229ENST00000543046 SLC43A3Q8NBI5 491 aa6.42□□□□□ -1.38
MDM2-229ENST00000543046 ANAPC16Q96DE5 110 aa6.42□□□□□ -1.38
MDM2-229ENST00000543046 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.42□□□□□ -1.386e-24■□□□□ 9.9
MDM2-229ENST00000543046 MKRN2Q9H000 416 aaKnown RBP6.42□□□□□ -1.38
MDM2-229ENST00000543046 SHISA3A0PJX4 238 aa6.41□□□□□ -1.38
MDM2-229ENST00000543046 TPP2P29144 1249 aaPredicted RBP6.41□□□□□ -1.38
MDM2-229ENST00000543046 PMS1P54277 932 aaKnown RBP6.41□□□□□ -1.38
MDM2-229ENST00000543046 ZP2Q05996 745 aa6.41□□□□□ -1.38
MDM2-229ENST00000543046 TTC6Q86TZ1 520 aa6.41□□□□□ -1.38
MDM2-229ENST00000543046 FAM169BQ8N8A8 192 aa6.41□□□□□ -1.38
MDM2-229ENST00000543046 C19orf47Q8N9M1 422 aaKnown RBP6.41□□□□□ -1.38
MDM2-229ENST00000543046 ASCC2Q9H1I8 757 aaPredicted RBP6.41□□□□□ -1.38
MDM2-229ENST00000543046 SLC12A7Q9Y666 1083 aa6.41□□□□□ -1.38
MDM2-229ENST00000543046 A0A1W2PQH9 124 aa6.4□□□□□ -1.38
MDM2-229ENST00000543046 C9IYK1 514 aa6.4□□□□□ -1.38
MDM2-229ENST00000543046 FGRP09769 529 aa6.4□□□□□ -1.38
MDM2-229ENST00000543046 NMIQ13287 307 aaPredicted RBP6.4□□□□□ -1.38
MDM2-229ENST00000543046 SNW1Q13573 536 aaKnown RBP6.4□□□□□ -1.38
MDM2-229ENST00000543046 PPP2R5EQ16537 467 aa6.4□□□□□ -1.38
MDM2-229ENST00000543046 TDRD10Q5VZ19 366 aaKnown RBP6.4□□□□□ -1.38
MDM2-229ENST00000543046 TMPRSS7Q7RTY8 843 aa6.4□□□□□ -1.38
MDM2-229ENST00000543046 TSPYL5Q86VY4 417 aaPredicted RBP6.4□□□□□ -1.38
MDM2-229ENST00000543046 PPFIBP1Q86W92 1011 aa6.4□□□□□ -1.38
MDM2-229ENST00000543046 PI4K2BQ8TCG2 481 aa6.4□□□□□ -1.38
MDM2-229ENST00000543046 CARS2Q9HA77 564 aaKnown RBP6.4□□□□□ -1.38
MDM2-229ENST00000543046 LMCD1Q9NZU5 365 aa6.4□□□□□ -1.38
MDM2-229ENST00000543046 MRVI1Q9Y6F6 885 aa6.4□□□□□ -1.38
MDM2-229ENST00000543046 LTBP3Q9NS15 1303 aa6.4□□□□□ -1.39
MDM2-229ENST00000543046 ESR1P03372 595 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 CASP7P55210 303 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 CLEC16AQ2KHT3 1053 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 GAB4Q2WGN9 574 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 ZNF792Q3KQV3 632 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 NAALADL2Q58DX5 795 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 SLC23A3Q6PIS1 610 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 TMC3Q7Z5M5 1100 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 MCF2L2Q86YR7 1114 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 CREG2Q8IUH2 290 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 CCDC144CPQ8IYA2 1237 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 SMARCC1Q92922 1105 aaPredicted RBP6.39□□□□□ -1.39
MDM2-229ENST00000543046 GMLQ99445 158 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 PRDM14Q9GZV8 571 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 PRDM7Q9NQW5 492 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 DUSP13Q9UII6 198 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 ADAMTS6Q9UKP5 1117 aa6.39□□□□□ -1.39
MDM2-229ENST00000543046 ZNF214Q9UL59 606 aaPredicted RBP6.39□□□□□ -1.39
MDM2-229ENST00000543046 AUHQ13825 339 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms