RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 SPTBN5Q9NRC6 3674 aaKnown RBP13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 MSCO60682 206 aa13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 BAG3O95817 575 aa13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 ATN1P54259 1190 aaPredicted RBP13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 CCNA1P78396 465 aa13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 ZSCAN25Q6NSZ9 544 aa13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 PI16Q6UXB8 463 aa13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 FOXP4Q8IVH2 680 aaPredicted RBP13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 CRACR2BQ8N4Y2 399 aaPredicted RBP13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 CDX2Q99626 313 aaPredicted RBP13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 USP26Q9BXU7 913 aa13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 LRP2BPQ9P2M1 347 aa13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 DDX20Q9UHI6 824 aaKnown RBP13.78□□□□□ -0.2
SRGAP1-205ENST00000542841 DNAH12Q6ZR08 3092 aa13.77□□□□□ -0.2
SRGAP1-205ENST00000542841 DNM1LO00429 736 aa13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 GDF11O95390 407 aa13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 PLCG2P16885 1265 aa13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 MCCP23508 829 aa13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 CNGA1P29973 690 aa13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 MCAMP43121 646 aa13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 JAG1P78504 1218 aa13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 TMED8Q6PL24 325 aaPredicted RBP13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 METTL16Q86W50 562 aaKnown RBP13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 MAFAQ8NHW3 353 aaPredicted RBP13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 LPAR1Q92633 364 aa13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 AATFQ9NY61 560 aaKnown RBP eCLIP13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 ZBTB21Q9ULJ3 1066 aa13.77□□□□□ -0.21
SRGAP1-205ENST00000542841 CDH23Q9H251 3354 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 GOLIM4O00461 696 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 ATP2B2Q01814 1243 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 WDR78Q5VTH9 848 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 USP17L2Q6R6M4 530 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 KIAA1211Q6ZU35 1233 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 TGFBRAP1Q8WUH2 860 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 SEMA6BQ9H3T3 888 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 DNAJC18Q9H819 358 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 PRDM6Q9NQX0 595 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 HELLSQ9NRZ9 838 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 EMILIN3Q9NT22 766 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 RABGAP1Q9Y3P9 1069 aa13.76□□□□□ -0.21
SRGAP1-205ENST00000542841 FLT1P17948 1338 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 SLC15A5A6NIM6 579 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 ZAP70P43403 619 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 RTP1P59025 263 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 ANAPC15P60006 121 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 SHHQ15465 462 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 SHROOM1Q2M3G4 852 aaPredicted RBP13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 NAA16Q6N069 864 aaPredicted RBP13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 POTEEQ6S8J3 1075 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 CWC27Q6UX04 472 aaKnown RBP13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 MAPKAPK5Q8IW41 473 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 IL17RAQ96F46 866 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 FLRT1Q9NZU1 646 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 ATP11BQ9Y2G3 1177 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 NDUFB9Q9Y6M9 179 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 IVNS1ABPQ9Y6Y0 642 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 MAST2Q6P0Q8 1798 aa13.75□□□□□ -0.21
SRGAP1-205ENST00000542841 MYO5AQ9Y4I1 1855 aaKnown RBP13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 USP17L15C9J2P7 530 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 USP17L13C9JLJ4 530 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 USP17L11C9JVI0 530 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 USP17L18D6R9N7 530 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 USP17L22D6RA61 530 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 USP17L17D6RBQ6 530 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 USP17L19D6RCP7 530 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 USP17L20D6RJB6 530 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 RNF113AO15541 343 aaKnown RBP13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 HLA-DOAP06340 250 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 PTPREP23469 700 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 USP17L24Q0WX57 530 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 ARRDC4Q8NCT1 418 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 SYMPKQ92797 1274 aaKnown RBP13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 ANO2Q9NQ90 1003 aa13.74□□□□□ -0.21
SRGAP1-205ENST00000542841 KBTBD13C9JR72 458 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 CNMDO75829 334 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 GH2P01242 217 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 HOXC6P09630 235 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 CYP2C19P33261 490 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 PPP4CP60510 307 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 SMAD3P84022 425 aaKnown RBP13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 UBE3CQ15386 1083 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 ZYXQ15942 572 aaKnown RBP13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 MCMDC2Q4G0Z9 681 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 ZMYM1Q5SVZ6 1142 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 C12orf42Q96LP6 360 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 FEZ1Q99689 392 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 LSG1Q9H089 658 aaKnown RBP13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 PRDM5Q9NQX1 630 aaPredicted RBP13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 SIPA1L1O43166 1804 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 FRMPD3Q5JV73 1810 aa13.73□□□□□ -0.21
SRGAP1-205ENST00000542841 CCDC171Q6TFL3 1326 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 PRUNE2Q8WUY3 3088 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 A0A0D9SFI3 127 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 CYP2E1P05181 493 aaPredicted RBP13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 FOSL2P15408 326 aa13.72□□□□□ -0.21
SRGAP1-205ENST00000542841 USP14P54578 494 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms