RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 NCBP1Q09161 790 aaKnown RBP13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 CAGE1Q8TC20 777 aa13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 OSBPL5Q9H0X9 879 aaPredicted RBP13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 FBXO2Q9UK22 296 aaPredicted RBP13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
SLC12A4-204ENST00000541864 MECOMQ03112 1051 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 CCDC96Q2M329 555 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 CCDC47Q96A33 483 aaKnown RBP13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 EPC1Q9H2F5 836 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 MYH7P12883 1935 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 LDHBP07195 334 aaKnown RBP13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 FAM193AP78312 1265 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 PTGDRQ13258 359 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 NOM1Q5C9Z4 860 aaKnown RBP13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 BAG1Q99933 345 aaPredicted RBP13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 TAB2Q9NYJ8 693 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 TTC38Q5R3I4 469 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 E4F1Q66K89 784 aaPredicted RBP13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 CTR9Q6PD62 1173 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 PPP1R13BQ96KQ4 1090 aa13.11□□□□□ -0.31
SLC12A4-204ENST00000541864 ZSCAN12O43309 604 aa13.1□□□□□ -0.31
SLC12A4-204ENST00000541864 NAPAP54920 295 aa13.1□□□□□ -0.31
SLC12A4-204ENST00000541864 EARS2Q5JPH6 523 aaKnown RBP13.1□□□□□ -0.31
SLC12A4-204ENST00000541864 JAKMIP3Q5VZ66 844 aa13.1□□□□□ -0.31
SLC12A4-204ENST00000541864 TRIM47Q96LD4 638 aa13.1□□□□□ -0.31
SLC12A4-204ENST00000541864 RIOK1Q9BRS2 568 aaKnown RBP13.1□□□□□ -0.31
SLC12A4-204ENST00000541864 RNF26Q9BY78 433 aaPredicted RBP13.1□□□□□ -0.31
SLC12A4-204ENST00000541864 FKBP15Q5T1M5 1219 aa13.1□□□□□ -0.31
SLC12A4-204ENST00000541864 CERS3Q8IU89 383 aa13.1□□□□□ -0.31
SLC12A4-204ENST00000541864 SYMPKQ92797 1274 aaKnown RBP13.1□□□□□ -0.31
SLC12A4-204ENST00000541864 KRT18P05783 430 aaKnown RBP13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 RAD51AP2Q09MP3 1159 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 IGSF22Q8N9C0 903 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 TMEM51Q9NW97 253 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 SEC63Q9UGP8 760 aaKnown RBP13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 THRAP3Q9Y2W1 955 aaKnown RBP13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 USP17L3A6NCW0 530 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 USP17L4A6NCW7 530 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 BMP6P22004 513 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 FMR1Q06787 632 aaKnown RBP eCLIP13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 SEC23AQ15436 765 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 USP17L1Q7RTZ2 530 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 SRPRBQ9Y5M8 271 aaKnown RBP13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 MYH3P11055 1940 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 SLIT2O94813 1529 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 CLEC4GQ6UXB4 293 aa13.09□□□□□ -0.31
SLC12A4-204ENST00000541864 UFL1O94874 794 aa13.08□□□□□ -0.31
SLC12A4-204ENST00000541864 KIF5BP33176 963 aa13.08□□□□□ -0.31
SLC12A4-204ENST00000541864 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.312e-11■■□□□ 11.5
SLC12A4-204ENST00000541864 PPARDQ03181 441 aa13.08□□□□□ -0.31
SLC12A4-204ENST00000541864 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.31
SLC12A4-204ENST00000541864 CTIFO43310 598 aaKnown RBP13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 INF2Q27J81 1249 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 NYAP1Q6ZVC0 841 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 KIAA1328Q86T90 577 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 TXNRD3Q86VQ6 643 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 DEF6Q9H4E7 631 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 MYH15Q9Y2K3 1946 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 RHOXF2BP0C7M4 288 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 MTIF2P46199 727 aaKnown RBP13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 MCM6Q14566 821 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 ZNF569Q5MCW4 686 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 KANK3Q6NY19 840 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 MLKLQ8NB16 471 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 ZNF622Q969S3 477 aaKnown RBP eCLIP13.08□□□□□ -0.322e-6■■□□□ 11.7
SLC12A4-204ENST00000541864 NSUN4Q96CB9 384 aaKnown RBP13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 RHOXF2Q9BQY4 288 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 RBM28Q9NW13 759 aaKnown RBP13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 GUCA1BQ9UMX6 200 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 ABCA3Q99758 1704 aa13.08□□□□□ -0.32
SLC12A4-204ENST00000541864 SPATA31A5Q5VU36 1347 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 SPATA31A7Q8IWB4 1347 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 KIF2AO00139 706 aaPredicted RBP13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 BAG3O95817 575 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 MMP14P50281 582 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 STIM1Q13586 685 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 DCP1AQ9NPI6 582 aaPredicted RBP13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 STRCQ7RTU9 1775 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 KIF5CO60282 957 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 PHACTR2O75167 634 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 CALM1P0DP23 149 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 CALM2P0DP24 149 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 CALM3P0DP25 149 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 TNNI2P48788 182 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 ASIC1P78348 528 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 UBXN1Q04323 297 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 PKN1Q16512 942 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 BRIP1Q9BX63 1249 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 NYXQ9GZU5 481 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 HSD3B7Q9H2F3 369 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 WNT7AO00755 349 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 CCP110O43303 1012 aa13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 PRPF3O43395 683 aaKnown RBP13.07□□□□□ -0.32
SLC12A4-204ENST00000541864 VSTM4Q8IW00 320 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms