RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 GAB4Q2WGN9 574 aa7.99□□□□□ -1.13
CIT-211ENST00000541841 TMEM67Q5HYA8 995 aa7.99□□□□□ -1.13
CIT-211ENST00000541841 PUS7Q96PZ0 661 aaKnown RBP7.99□□□□□ -1.13
CIT-211ENST00000541841 DIRC2Q96SL1 478 aa7.99□□□□□ -1.13
CIT-211ENST00000541841 SRFP11831 508 aa7.98□□□□□ -1.13
CIT-211ENST00000541841 EIF4A3P38919 411 aaKnown RBP7.98□□□□□ -1.13
CIT-211ENST00000541841 EGR3Q06889 387 aa7.98□□□□□ -1.13
CIT-211ENST00000541841 MRPL58Q14197 206 aaKnown RBP7.98□□□□□ -1.13
CIT-211ENST00000541841 TMPRSS7Q7RTY8 843 aa7.98□□□□□ -1.13
CIT-211ENST00000541841 RNF141Q8WVD5 230 aa7.98□□□□□ -1.13
CIT-211ENST00000541841 CCDC74BQ96LY2 380 aa7.98□□□□□ -1.13
CIT-211ENST00000541841 GPR62Q9BZJ7 368 aa7.98□□□□□ -1.13
CIT-211ENST00000541841 GGT7Q9UJ14 662 aa7.98□□□□□ -1.13
CIT-211ENST00000541841 TMEM59LQ9UK28 342 aa7.98□□□□□ -1.13
CIT-211ENST00000541841 PCDHB14Q9Y5E9 798 aa7.98□□□□□ -1.13
CIT-211ENST00000541841 LTKP29376 864 aa7.97□□□□□ -1.13
CIT-211ENST00000541841 POLR2BP30876 1174 aaKnown RBP7.97□□□□□ -1.13
CIT-211ENST00000541841 ARSHQ5FYA8 562 aa7.97□□□□□ -1.13
CIT-211ENST00000541841 TSPYL5Q86VY4 417 aaPredicted RBP7.97□□□□□ -1.13
CIT-211ENST00000541841 TRIT1Q9H3H1 467 aaKnown RBP7.97□□□□□ -1.13
CIT-211ENST00000541841 C19orf44Q9H6X5 657 aa7.97□□□□□ -1.13
CIT-211ENST00000541841 GPATCH2Q9NW75 528 aa7.97□□□□□ -1.13
CIT-211ENST00000541841 KCNH3Q9ULD8 1083 aa7.97□□□□□ -1.13
CIT-211ENST00000541841 PCDHA11Q9Y5I1 949 aa7.97□□□□□ -1.13
CIT-211ENST00000541841 HMGB1P09429 215 aaKnown RBP7.96□□□□□ -1.14
CIT-211ENST00000541841 GBP1P32455 592 aa7.96□□□□□ -1.14
CIT-211ENST00000541841 CWF19L2Q2TBE0 894 aaKnown RBP7.96□□□□□ -1.14
CIT-211ENST00000541841 ABHD4Q8TB40 342 aa7.96□□□□□ -1.14
CIT-211ENST00000541841 ZNF296Q8WUU4 475 aaPredicted RBP7.96□□□□□ -1.14
CIT-211ENST00000541841 UBP1Q9NZI7 540 aa7.96□□□□□ -1.14
CIT-211ENST00000541841 ADAMTS1Q9UHI8 967 aa7.96□□□□□ -1.14
CIT-211ENST00000541841 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
CIT-211ENST00000541841 SLC22A31A6NKX4 558 aa7.95□□□□□ -1.14
CIT-211ENST00000541841 CDK11BP21127 795 aaKnown RBP7.95□□□□□ -1.14
CIT-211ENST00000541841 PKN1Q16512 942 aa7.95□□□□□ -1.14
CIT-211ENST00000541841 SEZ6Q53EL9 994 aa7.95□□□□□ -1.14
CIT-211ENST00000541841 ZNF326Q5BKZ1 582 aaKnown RBP7.95□□□□□ -1.14
CIT-211ENST00000541841 SLC38A3Q99624 504 aa7.95□□□□□ -1.14
CIT-211ENST00000541841 NSUN3Q9H649 340 aaKnown RBP7.95□□□□□ -1.14
CIT-211ENST00000541841 CDK11AQ9UQ88 783 aaPredicted RBP7.95□□□□□ -1.14
CIT-211ENST00000541841 SUPT16HQ9Y5B9 1047 aaKnown RBP7.95□□□□□ -1.14
CIT-211ENST00000541841 ARID1BQ8NFD5 2236 aaPredicted RBP7.95□□□□□ -1.14
CIT-211ENST00000541841 GREM1O60565 184 aa7.94□□□□□ -1.14
CIT-211ENST00000541841 UBOX5O94941 541 aa7.94□□□□□ -1.14
CIT-211ENST00000541841 TCF3P15923 654 aa7.94□□□□□ -1.14
CIT-211ENST00000541841 OVOS1Q6IE37 1185 aa7.94□□□□□ -1.14
CIT-211ENST00000541841 FAM177A1Q8N128 213 aaPredicted RBP7.94□□□□□ -1.14
CIT-211ENST00000541841 MYLIPQ8WY64 445 aa7.94□□□□□ -1.14
CIT-211ENST00000541841 FAM84AQ96KN4 292 aa7.94□□□□□ -1.14
CIT-211ENST00000541841 ANTXR1Q9H6X2 564 aa7.94□□□□□ -1.14
CIT-211ENST00000541841 KCNQ5Q9NR82 932 aa7.94□□□□□ -1.14
CIT-211ENST00000541841 FAM53CQ9NYF3 392 aa7.94□□□□□ -1.14
CIT-211ENST00000541841 CLCQ05315 142 aa7.93□□□□□ -1.14
CIT-211ENST00000541841 TIGD5Q53EQ6 642 aa7.93□□□□□ -1.14
CIT-211ENST00000541841 LDLRAD1Q5T700 205 aa7.93□□□□□ -1.14
CIT-211ENST00000541841 GK5Q6ZS86 529 aa7.93□□□□□ -1.14
CIT-211ENST00000541841 HS2ST1Q7LGA3 356 aa7.93□□□□□ -1.14
CIT-211ENST00000541841 VWCEQ96DN2 955 aa7.93□□□□□ -1.14
CIT-211ENST00000541841 ZNF512BQ96KM6 892 aaPredicted RBP7.93□□□□□ -1.14
CIT-211ENST00000541841 ASPNQ9BXN1 380 aa7.93□□□□□ -1.14
CIT-211ENST00000541841 SP110Q9HB58 689 aa7.93□□□□□ -1.14
CIT-211ENST00000541841 EBF1Q9UH73 591 aa7.93□□□□□ -1.14
CIT-211ENST00000541841 DBX1A6NMT0 343 aa7.92□□□□□ -1.14
CIT-211ENST00000541841 HPXP02790 462 aa7.92□□□□□ -1.14
CIT-211ENST00000541841 ZGLP1P0C6A0 271 aa7.92□□□□□ -1.14
CIT-211ENST00000541841 RAC2P15153 192 aa7.92□□□□□ -1.14
CIT-211ENST00000541841 RAG1P15918 1043 aa7.92□□□□□ -1.14
CIT-211ENST00000541841 MCM4P33991 863 aa7.92□□□□□ -1.14
CIT-211ENST00000541841 GALK1P51570 392 aa7.92□□□□□ -1.14
CIT-211ENST00000541841 SNW1Q13573 536 aaKnown RBP7.92□□□□□ -1.14
CIT-211ENST00000541841 SYDE1Q6ZW31 735 aaPredicted RBP7.92□□□□□ -1.14
CIT-211ENST00000541841 CCDC120Q96HB5 630 aa7.92□□□□□ -1.14
CIT-211ENST00000541841 LRRC3Q9BY71 257 aa7.92□□□□□ -1.14
CIT-211ENST00000541841 RNF32Q9H0A6 362 aa7.92□□□□□ -1.14
CIT-211ENST00000541841 RGS13O14921 159 aa7.91□□□□□ -1.14
CIT-211ENST00000541841 CHMP4BP1P59074 171 aa7.91□□□□□ -1.14
CIT-211ENST00000541841 CLEC16AQ2KHT3 1053 aa7.91□□□□□ -1.14
CIT-211ENST00000541841 TMC3Q7Z5M5 1100 aa7.91□□□□□ -1.14
CIT-211ENST00000541841 TMEM87AQ8NBN3 555 aa7.91□□□□□ -1.14
CIT-211ENST00000541841 GMIPQ9P107 970 aa7.91□□□□□ -1.14
CIT-211ENST00000541841 MINPP1Q9UNW1 487 aa7.91□□□□□ -1.14
CIT-211ENST00000541841 ITGAEP38570 1179 aa7.9□□□□□ -1.14
CIT-211ENST00000541841 APOBRQ0VD83 1088 aa7.9□□□□□ -1.14
CIT-211ENST00000541841 FAM86C2PA6NEL3 165 aa7.89□□□□□ -1.15
CIT-211ENST00000541841 ATE1O95260 518 aa7.89□□□□□ -1.15
CIT-211ENST00000541841 KRT1P04264 644 aa7.89□□□□□ -1.15
CIT-211ENST00000541841 TEKQ02763 1124 aa7.89□□□□□ -1.15
CIT-211ENST00000541841 NMIQ13287 307 aaPredicted RBP7.89□□□□□ -1.15
CIT-211ENST00000541841 MLECQ14165 292 aa7.89□□□□□ -1.15
CIT-211ENST00000541841 ATG4CQ96DT6 458 aa7.89□□□□□ -1.15
CIT-211ENST00000541841 C1QTNF9P0C862 333 aa7.88□□□□□ -1.15
CIT-211ENST00000541841 NBPF12Q5TAG4 269 aaPredicted RBP7.88□□□□□ -1.15
CIT-211ENST00000541841 EAF1Q96JC9 268 aaPredicted RBP7.88□□□□□ -1.15
CIT-211ENST00000541841 HDAC8Q9BY41 377 aa7.88□□□□□ -1.15
CIT-211ENST00000541841 EHMT1Q9H9B1 1298 aa7.88□□□□□ -1.15
CIT-211ENST00000541841 DCP1AQ9NPI6 582 aaPredicted RBP7.88□□□□□ -1.15
CIT-211ENST00000541841 ROBO2Q9HCK4 1378 aa7.87□□□□□ -1.15
CIT-211ENST00000541841 RAP1GAPP47736 663 aa7.87□□□□□ -1.15
CIT-211ENST00000541841 CILP2Q8IUL8 1156 aa7.87□□□□□ -1.15
CIT-211ENST00000541841 FBXO15Q8NCQ5 510 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms