RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 KCNG1Q9UIX4 513 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 TSR3Q9UJK0 312 aaKnown RBP6.71□□□□□ -1.34
DDB1-219ENST00000541513 TRHDEQ9UKU6 1024 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 PNMA8BQ9ULN7 279 aaPredicted RBP6.71□□□□□ -1.34
DDB1-219ENST00000541513 MYO3AQ8NEV4 1616 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 KDM5AP29375 1690 aaKnown RBP6.71□□□□□ -1.34
DDB1-219ENST00000541513 SYNMO15061 1565 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 PIK3C2BO00750 1634 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 UPK3BL1B0FP48 263 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 UPK3BL2E5RIL1 263 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 FBXO21O94952 628 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 PGRP06401 933 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 EIF5P55010 431 aaKnown RBP6.7□□□□□ -1.34
DDB1-219ENST00000541513 RAB15P59190 212 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 GPSM2P81274 684 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 TCIRG1Q13488 830 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 LONRF1Q17RB8 773 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 CWF19L2Q2TBE0 894 aaKnown RBP6.7□□□□□ -1.34
DDB1-219ENST00000541513 MZT2AQ6P582 158 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 SUGP1Q8IWZ8 645 aaKnown RBP6.7□□□□□ -1.34
DDB1-219ENST00000541513 NKAPQ8N5F7 415 aaKnown RBP6.7□□□□□ -1.34
DDB1-219ENST00000541513 GATAD2BQ8WXI9 593 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 TTC17Q96AE7 1141 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 PLD4Q96BZ4 506 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 CLUHP3Q96NS8 147 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 MRPL4Q9BYD3 311 aaKnown RBP6.7□□□□□ -1.34
DDB1-219ENST00000541513 OSGEPQ9NPF4 335 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 KLHL11Q9NVR0 708 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 ZFATQ9P243 1243 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 ANKIB1Q9P2G1 1089 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 PCDHB3Q9Y5E6 796 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 HRH3Q9Y5N1 445 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 DGKBQ9Y6T7 804 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 TNKSO95271 1327 aa6.7□□□□□ -1.34
DDB1-219ENST00000541513 TNRQ92752 1358 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 PTPRTO14522 1441 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 NLRP1Q9C000 1473 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 IQCA1LA6NCM1 817 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 PRSS47A8MTI9 375 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 TGFBR3LH3BV60 316 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 APAF1O14727 1248 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 ERC2O15083 957 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 POLR3DP05423 398 aaPredicted RBP6.69□□□□□ -1.34
DDB1-219ENST00000541513 RBP3P10745 1247 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 CCNFP41002 786 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 CEBPAP49715 358 aaPredicted RBP6.69□□□□□ -1.34
DDB1-219ENST00000541513 HIF1AQ16665 826 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 ALDH1L2Q3SY69 923 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 C1QTNF12Q5T7M4 302 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
DDB1-219ENST00000541513 IER5Q5VY09 327 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 FBXW10Q5XX13 1052 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 PPP4R3AQ6IN85 833 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 LVRNQ6Q4G3 990 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 ANKRD23Q86SG2 305 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 L3MBTL2Q969R5 705 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 LRCH3Q96II8 777 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 OXCT2Q9BYC2 517 aaPredicted RBP6.69□□□□□ -1.34
DDB1-219ENST00000541513 CEP44Q9C0F1 390 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 ELP3Q9H9T3 547 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.69□□□□□ -1.34
DDB1-219ENST00000541513 NUB1Q9Y5A7 615 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 TRPM2O94759 1503 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 KIF1BO60333 1816 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 MYO5BQ9ULV0 1848 aa6.69□□□□□ -1.34
DDB1-219ENST00000541513 UBR1Q8IWV7 1749 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 A0A087WZG4 1122 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 A0A1W2PQH9 124 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 FAM221AA4D161 298 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 NBNO60934 754 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 F13A1P00488 732 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 CELA3AP09093 270 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 CCT5P48643 541 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 FCGRTP55899 365 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 STRN3Q13033 797 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 CHAF1AQ13111 956 aaPredicted RBP6.68□□□□□ -1.34
DDB1-219ENST00000541513 DDX10Q13206 875 aaKnown RBP6.68□□□□□ -1.34
DDB1-219ENST00000541513 BIRC3Q13489 604 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 CDC37Q16543 378 aaPredicted RBP6.68□□□□□ -1.34
DDB1-219ENST00000541513 SLC10A6Q3KNW5 377 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 COBLL1Q53SF7 1204 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 FAM133BQ5BKY9 247 aaKnown RBP6.68□□□□□ -1.34
DDB1-219ENST00000541513 GPR158Q5T848 1215 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 JAKMIP3Q5VZ66 844 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 CNTD1Q8N815 330 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 IL17REQ8NFR9 667 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 FBXO27Q8NI29 283 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 EXOC2Q96KP1 924 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 TBATAQ96M53 351 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 MPHOSPH9Q99550 1183 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 ZFYVE1Q9HBF4 777 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 ABCB6Q9NP58 842 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 NLRC4Q9NPP4 1024 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 TMEM63CQ9P1W3 806 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 EVLQ9UI08 416 aaPredicted RBP6.68□□□□□ -1.34
DDB1-219ENST00000541513 NAP1L2Q9ULW6 460 aaPredicted RBP6.68□□□□□ -1.34
DDB1-219ENST00000541513 PHTF1Q9UMS5 762 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 ZNF232Q9UNY5 417 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 HPS5Q9UPZ3 1129 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 MORC2Q9Y6X9 1032 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms