RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CHAMP1Q96JM3 812 aa11.93□□□□□ -0.5
CHFR-219ENST00000541341 DNAJC25Q9H1X3 360 aa11.93□□□□□ -0.5
CHFR-219ENST00000541341 CEP126Q9P2H0 1117 aa11.93□□□□□ -0.5
CHFR-219ENST00000541341 ZNF70Q9UC06 446 aaPredicted RBP11.93□□□□□ -0.5
CHFR-219ENST00000541341 MGAMO43451 1857 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 MYO5AQ9Y4I1 1855 aaKnown RBP11.92□□□□□ -0.5
CHFR-219ENST00000541341 AP5Z1O43299 807 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 ATP5JP18859 108 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 IREB2P48200 963 aaKnown RBP11.92□□□□□ -0.5
CHFR-219ENST00000541341 PTH1RQ03431 593 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 TFCP2Q12800 502 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 SUPT20HL1Q3ZLR7 823 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 NOM1Q5C9Z4 860 aaKnown RBP11.92□□□□□ -0.5
CHFR-219ENST00000541341 CT47A1Q5JQC4 288 aaPredicted RBP11.92□□□□□ -0.5
CHFR-219ENST00000541341 METTL24Q5JXM2 366 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 C17orf53Q8N3J3 647 aaPredicted RBP11.92□□□□□ -0.5
CHFR-219ENST00000541341 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 OPTNQ96CV9 577 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 ARID3AQ99856 593 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 PTPN18Q99952 460 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 SDF4Q9BRK5 362 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 TMEM39BQ9GZU3 492 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 DACH1Q9UI36 760 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 AKAP2Q9Y2D5 859 aa11.92□□□□□ -0.5
CHFR-219ENST00000541341 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.92□□□□□ -0.5
CHFR-219ENST00000541341 NR1I2O75469 434 aa11.91□□□□□ -0.5
CHFR-219ENST00000541341 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
CHFR-219ENST00000541341 ZBTB48P10074 688 aaPredicted RBP11.91□□□□□ -0.5
CHFR-219ENST00000541341 H2AFXP16104 143 aaPredicted RBP11.91□□□□□ -0.5
CHFR-219ENST00000541341 HIBADHP31937 336 aaKnown RBP11.91□□□□□ -0.5
CHFR-219ENST00000541341 NMIQ13287 307 aaPredicted RBP11.91□□□□□ -0.5
CHFR-219ENST00000541341 PUM3Q15397 648 aaKnown RBP11.91□□□□□ -0.5
CHFR-219ENST00000541341 CCDC158Q5M9N0 1113 aa11.91□□□□□ -0.5
CHFR-219ENST00000541341 DHX32Q7L7V1 743 aaKnown RBP11.91□□□□□ -0.5
CHFR-219ENST00000541341 LPIN2Q92539 896 aa11.91□□□□□ -0.5
CHFR-219ENST00000541341 ACBD3Q9H3P7 528 aa11.91□□□□□ -0.5
CHFR-219ENST00000541341 HELLSQ9NRZ9 838 aa11.91□□□□□ -0.5
CHFR-219ENST00000541341 RTEL1Q9NZ71 1219 aa11.91□□□□□ -0.5
CHFR-219ENST00000541341 DNAI1Q9UI46 699 aa11.91□□□□□ -0.5
CHFR-219ENST00000541341 MYH2Q9UKX2 1941 aa11.91□□□□□ -0.5
CHFR-219ENST00000541341 EN2P19622 333 aaPredicted RBP11.9□□□□□ -0.5
CHFR-219ENST00000541341 CRKP46108 304 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 MMP14P50281 582 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 ETF1P62495 437 aaKnown RBP11.9□□□□□ -0.5
CHFR-219ENST00000541341 SF3A1Q15459 793 aaKnown RBP11.9□□□□□ -0.5
CHFR-219ENST00000541341 ADCK5Q3MIX3 580 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 MCMDC2Q4G0Z9 681 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 TNNI3KQ59H18 835 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 ANKRD13AQ8IZ07 590 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 GPR161Q8N6U8 529 aaKnown RBP11.9□□□□□ -0.5
CHFR-219ENST00000541341 GOLGA6L1Q8N7Z2 621 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 BRF1Q92994 677 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 OTUD5Q96G74 571 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 FAM84BQ96KN1 310 aaPredicted RBP11.9□□□□□ -0.5
CHFR-219ENST00000541341 DSCC1Q9BVC3 393 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 PSD3Q9NYI0 1048 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 ZNF215Q9UL58 517 aaPredicted RBP11.9□□□□□ -0.5
CHFR-219ENST00000541341 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHFR-219ENST00000541341 PPP2R3BQ9Y5P8 575 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 FPGT-TNNI3KV9GXZ4 949 aa11.9□□□□□ -0.5
CHFR-219ENST00000541341 WDR19Q8NEZ3 1342 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 A0A1B0GUL7 405 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
CHFR-219ENST00000541341 LARGE1O95461 756 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 CYP2C19P33261 490 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 CCZ1BP86790 482 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 CCZ1P86791 482 aaPredicted RBP11.89□□□□□ -0.51
CHFR-219ENST00000541341 SP3Q02447 781 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 TOB2Q14106 344 aaPredicted RBP11.89□□□□□ -0.51
CHFR-219ENST00000541341 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 SYNE3Q6ZMZ3 975 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.89□□□□□ -0.51
CHFR-219ENST00000541341 VPS37DQ86XT2 251 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 HOMER1Q86YM7 354 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 NECAB1Q8N987 351 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 EAF2Q96CJ1 260 aaPredicted RBP11.89□□□□□ -0.51
CHFR-219ENST00000541341 TEPSINQ96N21 525 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 CFHR5Q9BXR6 569 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 GBP3Q9H0R5 595 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 EFCC1Q9HA90 598 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 PTPN22Q9Y2R2 807 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 MAST2Q6P0Q8 1798 aa11.89□□□□□ -0.51
CHFR-219ENST00000541341 KIAA0100Q14667 2235 aaKnown RBP11.88□□□□□ -0.51
CHFR-219ENST00000541341 FAM205AQ6ZU69 1335 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 CCL15-CCL14A0A0B4J2E2 113 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 ERLIN1O75477 346 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 MAP4K4O95819 1239 aaPredicted RBP11.88□□□□□ -0.51
CHFR-219ENST00000541341 IVLP07476 585 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 SLC5A1P13866 664 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 ME1P48163 572 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 INHBEP58166 350 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 NLRP12P59046 1061 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 FKBP1AP62942 108 aaKnown RBP11.88□□□□□ -0.51
CHFR-219ENST00000541341 LRMPQ12912 555 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 VGLL4Q14135 290 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 TAF1CQ15572 869 aaPredicted RBP11.88□□□□□ -0.51
CHFR-219ENST00000541341 CCL15Q16663 113 aa11.88□□□□□ -0.51
CHFR-219ENST00000541341 OTUD7BQ6GQQ9 843 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms