RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 SALL1Q9NSC2 1324 aa6.94□□□□□ -1.3
CDKN3-206ENST00000541304 PHF20L1A8MW92 1017 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 EPB41L2O43491 1005 aaKnown RBP6.93□□□□□ -1.3
CDKN3-206ENST00000541304 SMARCA5O60264 1052 aaPredicted RBP6.93□□□□□ -1.3
CDKN3-206ENST00000541304 GRIN3BO60391 1043 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 FRAT2O75474 233 aaPredicted RBP6.93□□□□□ -1.3
CDKN3-206ENST00000541304 INHAP05111 366 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 IL1R1P14778 569 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 MSX1P28360 303 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 FKBP1AP62942 108 aaKnown RBP6.93□□□□□ -1.3
CDKN3-206ENST00000541304 GPSM2P81274 684 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 SPTY2D1Q68D10 685 aaPredicted RBP6.93□□□□□ -1.3
CDKN3-206ENST00000541304 TBC1D9Q6ZT07 1266 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 FBXO33Q7Z6M2 555 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 NEDD1Q8NHV4 660 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 WDR66Q8TBY9 1149 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 PI4K2BQ8TCG2 481 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 RUFY2Q8WXA3 655 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 PSMG3-AS1Q96PY0 264 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 SYT17Q9BSW7 474 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 OXCT2Q9BYC2 517 aaPredicted RBP6.93□□□□□ -1.3
CDKN3-206ENST00000541304 CCDC8Q9H0W5 538 aaPredicted RBP6.93□□□□□ -1.3
CDKN3-206ENST00000541304 RAD50Q92878 1312 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 IRS2Q9Y4H2 1338 aa6.93□□□□□ -1.3
CDKN3-206ENST00000541304 C21orf2O43822 256 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 TAF5LO75529 589 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 RGS3P49796 1198 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 MFAP1P55081 439 aaKnown RBP6.92□□□□□ -1.3
CDKN3-206ENST00000541304 TIMM10P62072 90 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 SPATA5Q8NB90 893 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 JDP2Q8WYK2 163 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 FAM84BQ96KN1 310 aaPredicted RBP6.92□□□□□ -1.3
CDKN3-206ENST00000541304 CRISPLD1Q9H336 500 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 PAG1Q9NWQ8 432 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 POLLQ9UGP5 575 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 ATXN7L1Q9ULK2 861 aaPredicted RBP6.92□□□□□ -1.3
CDKN3-206ENST00000541304 BCS1LQ9Y276 419 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 COL4A1P02462 1669 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 FAM205AQ6ZU69 1335 aa6.92□□□□□ -1.3
CDKN3-206ENST00000541304 PPIP5K2O43314 1243 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 OIP5O43482 229 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 CDC45O75419 566 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 PHKA1P46020 1223 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 GSTO1P78417 241 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 FOXK2Q01167 660 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 MAP3K12Q12852 859 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 RASGRF1Q13972 1273 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 UBAP2LQ14157 1087 aaKnown RBP6.91□□□□□ -1.3
CDKN3-206ENST00000541304 NIM1KQ8IY84 436 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 KBTBD3Q8NAB2 608 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 TDRD7Q8NHU6 1098 aaKnown RBP6.91□□□□□ -1.3
CDKN3-206ENST00000541304 CD209Q9NNX6 404 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 TLR7Q9NYK1 1049 aaKnown RBP6.91□□□□□ -1.3
CDKN3-206ENST00000541304 SLX4Q8IY92 1834 aa6.91□□□□□ -1.3
CDKN3-206ENST00000541304 MAST2Q6P0Q8 1798 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 MAP4K4O95819 1239 aaPredicted RBP6.9□□□□□ -1.3
CDKN3-206ENST00000541304 LMNB1P20700 586 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 RPS12P25398 132 aaKnown RBP6.9□□□□□ -1.3
CDKN3-206ENST00000541304 ADORA1P30542 326 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 IARSP41252 1262 aaKnown RBP6.9□□□□□ -1.3
CDKN3-206ENST00000541304 MCAMP43121 646 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 GYG1P46976 350 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 SMTNP53814 917 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 TNIP1Q15025 636 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 EML3Q32P44 896 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 STRIP1Q5VSL9 837 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 C16orf71Q8IYS4 520 aaPredicted RBP6.9□□□□□ -1.3
CDKN3-206ENST00000541304 LARGE2Q8N3Y3 721 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 NLGN2Q8NFZ4 835 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 C1orf216Q8TAB5 229 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 DNAJC2Q99543 621 aaKnown RBP6.9□□□□□ -1.3
CDKN3-206ENST00000541304 FSD1Q9BTV5 496 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 NIFKQ9BYG3 293 aaKnown RBP6.9□□□□□ -1.3
CDKN3-206ENST00000541304 UPF2Q9HAU5 1272 aaKnown RBP6.9□□□□□ -1.3
CDKN3-206ENST00000541304 DIAPH3Q9NSV4 1193 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 HMG20BQ9P0W2 317 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 GDF2Q9UK05 429 aaPredicted RBP6.9□□□□□ -1.3
CDKN3-206ENST00000541304 ZNRF3Q9ULT6 936 aa6.9□□□□□ -1.3
CDKN3-206ENST00000541304 RPAP1Q9BWH6 1393 aaPredicted RBP6.9□□□□□ -1.31
CDKN3-206ENST00000541304 FER1L6Q2WGJ9 1857 aa6.9□□□□□ -1.31
CDKN3-206ENST00000541304 PIK3CDO00329 1044 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 ECE2O60344 883 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 REC8O95072 547 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 IGHA1P01876 353 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 LDHCP07864 332 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 PRKCSHP14314 528 aaPredicted RBP6.89□□□□□ -1.31
CDKN3-206ENST00000541304 GSPT1P15170 499 aaKnown RBP6.89□□□□□ -1.31
CDKN3-206ENST00000541304 SDSP20132 328 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 ATP4AP20648 1035 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 HDLBPQ00341 1268 aaKnown RBP6.89□□□□□ -1.31
CDKN3-206ENST00000541304 UBE3CQ15386 1083 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 GPAT2Q6NUI2 795 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 FIGNL1Q6PIW4 674 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 ERICH6Q7L0X2 663 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 AGBL3Q8NEM8 1001 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 OTUD7AQ8TE49 926 aaPredicted RBP6.89□□□□□ -1.31
CDKN3-206ENST00000541304 RILPL2Q969X0 211 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 ABHD17AQ96GS6 310 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 MRIQ9BWK5 157 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 BOLA2Q9H3K6 86 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms