RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 CYP2C19P33261 490 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 BMS1Q14692 1282 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 SLC44A5Q8NCS7 719 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 ERO1AQ96HE7 468 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 TDRD3Q9H7E2 651 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 BRCA2P51587 3418 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 GSG1L2A8MUP6 293 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 PNMA6AP0CW24 399 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 SHROOM1Q2M3G4 852 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 ENGASEQ8NFI3 743 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 WDR66Q8TBY9 1149 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 ZNF274Q96GC6 653 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 NBPF3Q9H094 633 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 ZSWIM4Q9H7M6 989 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 ZNF202O95125 648 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 PODNQ7Z5L7 613 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 LINC00301Q8NCQ3 95 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 NCOA7Q8NI08 942 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 DYNLL2Q96FJ2 89 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 PSMD1Q99460 953 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 DNAI1Q9UI46 699 aa16.38■□□□□ 0.21
SFSWAP-210ENST00000541286 MYH2Q9UKX2 1941 aa16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 IRX3P78415 501 aaPredicted RBP16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 TBC1D10BQ4KMP7 808 aaPredicted RBP16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 MYSM1Q5VVJ2 828 aa16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 DDX4Q9NQI0 724 aaKnown RBP16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 KIAA1468Q9P260 1216 aa16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 CAVIN2O95810 425 aa16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 ADALQ6DHV7 355 aa16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 MRFAP1L1Q96HT8 127 aa16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 CLIC6Q96NY7 704 aa16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
SFSWAP-210ENST00000541286 B4E1Z4 1266 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 SERPINC1P01008 464 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 ATP1A3P13637 1013 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 UBE3CQ15386 1083 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 C15orf52Q6ZUT6 534 aaKnown RBP16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 ALG1Q9BT22 464 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 ZNRF3Q9ULT6 936 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 MYH7P12883 1935 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 SFPQP23246 707 aaKnown RBP eCLIP16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 C9orf131Q5VYM1 1079 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 TBC1D10CQ8IV04 446 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 FBXO18Q8NFZ0 1043 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 SENP2Q9HC62 589 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 TULP2O00295 520 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 URI1O94763 535 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 CCZ1BP86790 482 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 CCZ1P86791 482 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 SYCP1Q15431 976 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 NYAP1Q6ZVC0 841 aa16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-210ENST00000541286 PFKFB1P16118 471 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 TDO2P48775 406 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 TPM4P67936 248 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 USP17L12C9JPN9 530 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 USP17L21D6R901 530 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 CRKP46108 304 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 METAP2P50579 478 aaKnown RBP eCLIP16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 CFAP100Q494V2 611 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 ANO1Q5XXA6 986 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 IFNL3Q8IZI9 196 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 KCNG4Q8TDN1 519 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 RTEL1Q9NZ71 1219 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
SFSWAP-210ENST00000541286 GMPSP49915 693 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 PLCD1P51178 756 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 CMTR1Q8N1G2 835 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 PDILTQ8N807 584 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 TCP10L2B9ZVM9 353 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 SYKP43405 635 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 ANTXR2P58335 489 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 APOBEC3HQ6NTF7 200 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 UBXN4Q92575 508 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 EPS15P42566 896 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 LMAN1P49257 510 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 PNOCQ13519 176 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 STRIP1Q5VSL9 837 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 TMCO3Q6UWJ1 677 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 VEZTQ9HBM0 779 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 MCM9Q9NXL9 1143 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 FAM205AQ6ZU69 1335 aa16.34■□□□□ 0.21
SFSWAP-210ENST00000541286 WDHD1O75717 1129 aaPredicted RBP16.33■□□□□ 0.21
SFSWAP-210ENST00000541286 CLEC10AQ8IUN9 316 aa16.33■□□□□ 0.21
SFSWAP-210ENST00000541286 USP40Q9NVE5 1235 aa16.33■□□□□ 0.21
SFSWAP-210ENST00000541286 MTMR7Q9Y216 660 aa16.33■□□□□ 0.21
SFSWAP-210ENST00000541286 SEMA3EO15041 775 aa16.33■□□□□ 0.2
SFSWAP-210ENST00000541286 RHBDL3P58872 404 aa16.33■□□□□ 0.2
SFSWAP-210ENST00000541286 TRIM29Q14134 588 aa16.33■□□□□ 0.2
SFSWAP-210ENST00000541286 E4F1Q66K89 784 aaPredicted RBP16.33■□□□□ 0.2
SFSWAP-210ENST00000541286 CDC42EP5Q6NZY7 148 aa16.33■□□□□ 0.2
SFSWAP-210ENST00000541286 SARM1Q6SZW1 724 aa16.33■□□□□ 0.2
SFSWAP-210ENST00000541286 CARD6Q9BX69 1037 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms