RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 PIK3CAP42336 1068 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 CYP2J2P51589 502 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 HERC4Q5GLZ8 1057 aaPredicted RBP11.04□□□□□ -0.64
TRERF1-205ENST00000541110 PDZD4Q76G19 769 aaPredicted RBP11.04□□□□□ -0.64
TRERF1-205ENST00000541110 GLT8D2Q9H1C3 349 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 FRMPD2Q68DX3 1309 aaPredicted RBP11.04□□□□□ -0.64
TRERF1-205ENST00000541110 MIER3Q7Z3K6 550 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 SNX29Q8TEQ0 813 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 FTOQ9C0B1 505 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRERF1-205ENST00000541110 VCX3AQ9NNX9 186 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 PARP2Q9UGN5 583 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 POLR2DO15514 142 aaKnown RBP11.04□□□□□ -0.64
TRERF1-205ENST00000541110 OSBPP22059 807 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 DENND2CQ68D51 928 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 TTBK2Q6IQ55 1244 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 GDAP1Q8TB36 358 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 TTC1Q99614 292 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 ARHGAP42A6NI28 874 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 ELF1P32519 619 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 PUM3Q15397 648 aaKnown RBP11.04□□□□□ -0.64
TRERF1-205ENST00000541110 C8orf74Q6P047 294 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 NELFCDQ8IXH7 590 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 WDR48Q8TAF3 677 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 TMX3Q96JJ7 454 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 TROQ12816 1431 aaPredicted RBP11.04□□□□□ -0.64
TRERF1-205ENST00000541110 CASKIN1Q8WXD9 1431 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 KSR2Q6VAB6 950 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 PRPF38AQ8NAV1 312 aaKnown RBP11.04□□□□□ -0.64
TRERF1-205ENST00000541110 ZNF653Q96CK0 615 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 A6NJR5 290 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 DMP1Q13316 513 aaPredicted RBP11.04□□□□□ -0.64
TRERF1-205ENST00000541110 RINT1Q6NUQ1 792 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 PSMB7Q99436 277 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRERF1-205ENST00000541110 ABCC5O15440 1437 aa11.04□□□□□ -0.64
TRERF1-205ENST00000541110 SYNDIG1LA6NDD5 238 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 TAF5LO75529 589 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 LMNTD2Q8IXW0 634 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 FAM89AQ96GI7 184 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 SLC12A6Q9UHW9 1150 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 MRC2Q9UBG0 1479 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 XAB2Q9HCS7 855 aaKnown RBP11.03□□□□□ -0.64
TRERF1-205ENST00000541110 PRDM5Q9NQX1 630 aaPredicted RBP11.03□□□□□ -0.64
TRERF1-205ENST00000541110 M0R2C6 588 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 SLC9A5Q14940 896 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 CSGALNACT2Q8N6G5 542 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 ORC6Q9Y5N6 252 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 GNGT2O14610 69 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 PLCH2O75038 1416 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 DBN1Q16643 649 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 CDC37L1Q7L3B6 337 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 MAPKAPK5Q8IW41 473 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 USP40Q9NVE5 1235 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 RAB20Q9NX57 234 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 PHBP35232 272 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 DCAF15Q66K64 600 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 CAPN12Q6ZSI9 719 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 RAB44Q7Z6P3 723 aaPredicted RBP11.03□□□□□ -0.64
TRERF1-205ENST00000541110 ELMOD1Q8N336 334 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 ARFGAP2Q8N6H7 521 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
TRERF1-205ENST00000541110 SUCLA2Q9P2R7 463 aaPredicted RBP11.03□□□□□ -0.64
TRERF1-205ENST00000541110 LRRIQ4A6NIV6 560 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 MAFGO15525 162 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 DLATP10515 647 aaKnown RBP11.03□□□□□ -0.64
TRERF1-205ENST00000541110 NPR1P16066 1061 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 UVSSAQ2YD98 709 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 ANGPTL8Q6UXH0 198 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 VSIG1Q86XK7 387 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 MCUQ8NE86 351 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 LRGUKQ96M69 825 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 CSRNP1Q96S65 589 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 HESX1Q9UBX0 185 aa11.03□□□□□ -0.64
TRERF1-205ENST00000541110 IFNB1P01574 187 aa11.02□□□□□ -0.64
TRERF1-205ENST00000541110 SDSP20132 328 aa11.02□□□□□ -0.64
TRERF1-205ENST00000541110 LCA5Q86VQ0 697 aa11.02□□□□□ -0.64
TRERF1-205ENST00000541110 KLHL7Q8IXQ5 586 aa11.02□□□□□ -0.64
TRERF1-205ENST00000541110 TAB3Q8N5C8 712 aaPredicted RBP11.02□□□□□ -0.64
TRERF1-205ENST00000541110 RMDN2Q96LZ7 410 aa11.02□□□□□ -0.64
TRERF1-205ENST00000541110 STK38LQ9Y2H1 464 aa11.02□□□□□ -0.64
TRERF1-205ENST00000541110 PPFIA4O75335 1185 aa11.02□□□□□ -0.64
TRERF1-205ENST00000541110 ARHGAP4P98171 946 aa11.02□□□□□ -0.64
TRERF1-205ENST00000541110 CWF19L2Q2TBE0 894 aaKnown RBP11.02□□□□□ -0.64
TRERF1-205ENST00000541110 BBS5Q8N3I7 341 aa11.02□□□□□ -0.64
TRERF1-205ENST00000541110 FGD4Q96M96 766 aa11.02□□□□□ -0.64
TRERF1-205ENST00000541110 TTF2Q9UNY4 1162 aaKnown RBP11.02□□□□□ -0.64
TRERF1-205ENST00000541110 RNF8O76064 485 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 HSPA2P54652 639 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 HADHQ16836 314 aaKnown RBP11.02□□□□□ -0.65
TRERF1-205ENST00000541110 HDXQ7Z353 690 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 NR1H4Q96RI1 486 aaPredicted RBP11.02□□□□□ -0.65
TRERF1-205ENST00000541110 PLEKHA4Q9H4M7 779 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 KDRP35968 1356 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 KRT10P13645 584 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 SLC9C1Q4G0N8 1177 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 CCDC93Q567U6 631 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 CCDC186Q7Z3E2 898 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 IFT20Q8IY31 132 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms