RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 RASEFQ8IZ41 740 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 LPAR1Q92633 364 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 KCNB2Q92953 911 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 ZSCAN10Q96SZ4 725 aaPredicted RBP18.25■□□□□ 0.51
DDB1-218ENST00000540784 UBAC1Q9BSL1 405 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 ZFYVE28Q9HCC9 887 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 SAGE1Q9NXZ1 904 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 SYNPO2Q9UMS6 1093 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 USP17L15C9J2P7 530 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 USP17L13C9JLJ4 530 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 USP17L11C9JVI0 530 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 USP17L18D6R9N7 530 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 USP17L22D6RA61 530 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 USP17L17D6RBQ6 530 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 USP17L19D6RCP7 530 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 USP17L20D6RJB6 530 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 TOP1P11387 765 aaKnown RBP18.24■□□□□ 0.51
DDB1-218ENST00000540784 HOXA7P31268 230 aaPredicted RBP18.24■□□□□ 0.51
DDB1-218ENST00000540784 NOVP48745 357 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 USP17L24Q0WX57 530 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 TAF1CQ15572 869 aaPredicted RBP18.24■□□□□ 0.51
DDB1-218ENST00000540784 CYB5R4Q7L1T6 521 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 SPICE1Q8N0Z3 855 aa18.24■□□□□ 0.51
DDB1-218ENST00000540784 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
DDB1-218ENST00000540784 MYH8P13535 1937 aa18.23■□□□□ 0.51
DDB1-218ENST00000540784 SEC24BO95487 1268 aa18.23■□□□□ 0.51
DDB1-218ENST00000540784 HSPA1AP0DMV8 641 aaKnown RBP18.23■□□□□ 0.51
DDB1-218ENST00000540784 HSPA1BP0DMV9 641 aaKnown RBP18.23■□□□□ 0.51
DDB1-218ENST00000540784 MCM5P33992 734 aa18.23■□□□□ 0.51
DDB1-218ENST00000540784 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
DDB1-218ENST00000540784 KIAA1755Q5JYT7 1200 aa18.23■□□□□ 0.51
DDB1-218ENST00000540784 LRRC47Q8N1G4 583 aaKnown RBP18.23■□□□□ 0.51
DDB1-218ENST00000540784 ANKS1AQ92625 1134 aa18.23■□□□□ 0.51
DDB1-218ENST00000540784 NEK1Q96PY6 1258 aa18.23■□□□□ 0.51
DDB1-218ENST00000540784 TMEM47Q9BQJ4 181 aa18.23■□□□□ 0.51
DDB1-218ENST00000540784 PNMA3Q9UL41 463 aa18.23■□□□□ 0.51
DDB1-218ENST00000540784 ERICH2A1L162 156 aa18.22■□□□□ 0.51
DDB1-218ENST00000540784 IFIT3O14879 490 aaKnown RBP18.22■□□□□ 0.51
DDB1-218ENST00000540784 VCAM1P19320 739 aa18.22■□□□□ 0.51
DDB1-218ENST00000540784 SART3Q15020 963 aaKnown RBP18.22■□□□□ 0.51
DDB1-218ENST00000540784 SLFN13Q68D06 897 aa18.22■□□□□ 0.51
DDB1-218ENST00000540784 RCSD1Q6JBY9 416 aa18.22■□□□□ 0.51
DDB1-218ENST00000540784 CHST3Q7LGC8 479 aa18.22■□□□□ 0.51
DDB1-218ENST00000540784 MB21D2Q8IYB1 491 aaPredicted RBP18.22■□□□□ 0.51
DDB1-218ENST00000540784 GMCL1P1Q8NEA9 526 aa18.22■□□□□ 0.51
DDB1-218ENST00000540784 PARK7Q99497 189 aaKnown RBP18.22■□□□□ 0.51
DDB1-218ENST00000540784 RPAP3Q9H6T3 665 aaPredicted RBP18.22■□□□□ 0.51
DDB1-218ENST00000540784 SNX14Q9Y5W7 946 aa18.22■□□□□ 0.51
DDB1-218ENST00000540784 THSD7BQ9C0I4 1608 aa18.21■□□□□ 0.51
DDB1-218ENST00000540784 WDR46O15213 610 aaKnown RBP18.21■□□□□ 0.51
DDB1-218ENST00000540784 NDUFB10O96000 172 aa18.21■□□□□ 0.51
DDB1-218ENST00000540784 HMGB1P09429 215 aaKnown RBP18.21■□□□□ 0.51
DDB1-218ENST00000540784 CYP2C8P10632 490 aa18.21■□□□□ 0.51
DDB1-218ENST00000540784 IRX3P78415 501 aaPredicted RBP18.21■□□□□ 0.51
DDB1-218ENST00000540784 CRHR2Q13324 411 aa18.21■□□□□ 0.51
DDB1-218ENST00000540784 CATSPERGQ6ZRH7 1159 aa18.21■□□□□ 0.51
DDB1-218ENST00000540784 ENAHQ8N8S7 591 aaPredicted RBP18.21■□□□□ 0.51
DDB1-218ENST00000540784 P2RX7Q99572 595 aaKnown RBP18.21■□□□□ 0.51
DDB1-218ENST00000540784 CFHR5Q9BXR6 569 aa18.21■□□□□ 0.51
DDB1-218ENST00000540784 ASCC2Q9H1I8 757 aaPredicted RBP18.21■□□□□ 0.51
DDB1-218ENST00000540784 TNKSO95271 1327 aa18.21■□□□□ 0.51
DDB1-218ENST00000540784 PRC1O43663 620 aa18.2■□□□□ 0.5
DDB1-218ENST00000540784 COG2Q14746 738 aa18.2■□□□□ 0.5
DDB1-218ENST00000540784 ADCK5Q3MIX3 580 aa18.2■□□□□ 0.5
DDB1-218ENST00000540784 IFIT1BQ5T764 474 aaKnown RBP18.2■□□□□ 0.5
DDB1-218ENST00000540784 DHX32Q7L7V1 743 aaKnown RBP18.2■□□□□ 0.5
DDB1-218ENST00000540784 TANGO6Q9C0B7 1094 aa18.2■□□□□ 0.5
DDB1-218ENST00000540784 R3HDMLQ9H3Y0 253 aa18.2■□□□□ 0.5
DDB1-218ENST00000540784 KAT14Q9H8E8 782 aa18.2■□□□□ 0.5
DDB1-218ENST00000540784 HOXC10Q9NYD6 342 aa18.2■□□□□ 0.5
DDB1-218ENST00000540784 TSKSQ9UJT2 592 aa18.2■□□□□ 0.5
DDB1-218ENST00000540784 LAMA4Q16363 1823 aa18.2■□□□□ 0.5
DDB1-218ENST00000540784 FOXN1O15353 648 aa18.19■□□□□ 0.5
DDB1-218ENST00000540784 TLR2O60603 784 aa18.19■□□□□ 0.5
DDB1-218ENST00000540784 PSMA5P28066 241 aa18.19■□□□□ 0.5
DDB1-218ENST00000540784 CTCFP49711 727 aaPredicted RBP18.19■□□□□ 0.5
DDB1-218ENST00000540784 SEC23AQ15436 765 aa18.19■□□□□ 0.5
DDB1-218ENST00000540784 TMEM67Q5HYA8 995 aa18.19■□□□□ 0.5
DDB1-218ENST00000540784 IGDCC4Q8TDY8 1250 aa18.19■□□□□ 0.5
DDB1-218ENST00000540784 SMCR8Q8TEV9 937 aaPredicted RBP18.19■□□□□ 0.5
DDB1-218ENST00000540784 CHMP4CQ96CF2 233 aa18.19■□□□□ 0.5
DDB1-218ENST00000540784 TMEM87BQ96K49 555 aa18.19■□□□□ 0.5
DDB1-218ENST00000540784 JAKMIP1Q96N16 626 aaKnown RBP18.19■□□□□ 0.5
DDB1-218ENST00000540784 NUP88Q99567 741 aaPredicted RBP18.19■□□□□ 0.5
DDB1-218ENST00000540784 MTA3Q9BTC8 594 aa18.19■□□□□ 0.5
DDB1-218ENST00000540784 MTMR7Q9Y216 660 aa18.19■□□□□ 0.5
DDB1-218ENST00000540784 BMP3P12645 472 aa18.18■□□□□ 0.5
DDB1-218ENST00000540784 SLC1A4P43007 532 aa18.18■□□□□ 0.5
DDB1-218ENST00000540784 ANTXR2P58335 489 aa18.18■□□□□ 0.5
DDB1-218ENST00000540784 WTAPQ15007 396 aa18.18■□□□□ 0.5
DDB1-218ENST00000540784 FAM83BQ5T0W9 1011 aa18.18■□□□□ 0.5
DDB1-218ENST00000540784 TMTC2Q8N394 836 aa18.18■□□□□ 0.5
DDB1-218ENST00000540784 GMCL1Q96IK5 515 aa18.18■□□□□ 0.5
DDB1-218ENST00000540784 ISY1Q9ULR0 285 aaKnown RBP18.18■□□□□ 0.5
DDB1-218ENST00000540784 GREB1LQ9C091 1923 aaPredicted RBP18.17■□□□□ 0.5
DDB1-218ENST00000540784 FLOT1O75955 427 aa18.17■□□□□ 0.5
DDB1-218ENST00000540784 GCLCP48506 637 aaPredicted RBP18.17■□□□□ 0.5
DDB1-218ENST00000540784 HERVK_113P62684 666 aa18.17■□□□□ 0.5
DDB1-218ENST00000540784 EXOSC10Q01780 885 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms