RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 CLEC10AQ8IUN9 316 aa25.12■■□□□ 1.61
CHFR-217ENST00000540537 TRIB2Q92519 343 aa25.12■■□□□ 1.61
CHFR-217ENST00000540537 USP6NLQ92738 828 aa25.12■■□□□ 1.61
CHFR-217ENST00000540537 ROBO3Q96MS0 1386 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 M0R2C6 588 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 RGS2P41220 211 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 COG2Q14746 738 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 ANKRD45Q5TZF3 282 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 TRMT44Q8IYL2 757 aaKnown RBP25.11■■□□□ 1.61
CHFR-217ENST00000540537 DEFB118Q96PH6 123 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.11■■□□□ 1.61
CHFR-217ENST00000540537 VCPKMTQ9H867 229 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 KANSL2Q9H9L4 492 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 CWC22Q9HCG8 908 aaKnown RBP25.11■■□□□ 1.61
CHFR-217ENST00000540537 HOXC10Q9NYD6 342 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 BTBD7Q9P203 1132 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 RLFQ13129 1914 aa25.11■■□□□ 1.61
CHFR-217ENST00000540537 KIAA1755Q5JYT7 1200 aa25.1■■□□□ 1.61
CHFR-217ENST00000540537 FSD1Q9BTV5 496 aa25.1■■□□□ 1.61
CHFR-217ENST00000540537 TANGO6Q9C0B7 1094 aa25.1■■□□□ 1.61
CHFR-217ENST00000540537 EPB41L4AQ9HCS5 686 aaPredicted RBP25.1■■□□□ 1.61
CHFR-217ENST00000540537 GREB1LQ9C091 1923 aaPredicted RBP25.1■■□□□ 1.61
CHFR-217ENST00000540537 RPTORQ8N122 1335 aa25.1■■□□□ 1.61
CHFR-217ENST00000540537 CEP290O15078 2479 aa25.09■■□□□ 1.61
CHFR-217ENST00000540537 FARP2O94887 1054 aaPredicted RBP25.09■■□□□ 1.61
CHFR-217ENST00000540537 TRIM32Q13049 653 aa25.09■■□□□ 1.61
CHFR-217ENST00000540537 APBA2Q99767 749 aa25.09■■□□□ 1.61
CHFR-217ENST00000540537 CRISPLD2Q9H0B8 497 aa25.09■■□□□ 1.61
CHFR-217ENST00000540537 HMX1Q9NP08 348 aaPredicted RBP25.09■■□□□ 1.61
CHFR-217ENST00000540537 A0A0G2JMZ2 1700 aa25.09■■□□□ 1.61
CHFR-217ENST00000540537 TFRCP02786 760 aaKnown RBP25.08■■□□□ 1.61
CHFR-217ENST00000540537 EEF2P13639 858 aaKnown RBP25.08■■□□□ 1.61
CHFR-217ENST00000540537 TDO2P48775 406 aa25.08■■□□□ 1.61
CHFR-217ENST00000540537 MAP3K21Q5TCX8 1036 aa25.08■■□□□ 1.61
CHFR-217ENST00000540537 MINDY4BA8MYZ0 360 aa25.07■■□□□ 1.6
CHFR-217ENST00000540537 PATL2C9JE40 543 aaKnown RBP25.07■■□□□ 1.6
CHFR-217ENST00000540537 WDR46O15213 610 aaKnown RBP25.07■■□□□ 1.6
CHFR-217ENST00000540537 ZKSCAN1P17029 563 aaPredicted RBP25.07■■□□□ 1.6
CHFR-217ENST00000540537 DSG3P32926 999 aa25.07■■□□□ 1.6
CHFR-217ENST00000540537 MAP2K5Q13163 448 aa25.07■■□□□ 1.6
CHFR-217ENST00000540537 ZMYM1Q5SVZ6 1142 aa25.07■■□□□ 1.6
CHFR-217ENST00000540537 SPICE1Q8N0Z3 855 aa25.07■■□□□ 1.6
CHFR-217ENST00000540537 MB21D1Q8N884 522 aa25.07■■□□□ 1.6
CHFR-217ENST00000540537 HTATIP2Q9BUP3 242 aa25.07■■□□□ 1.6
CHFR-217ENST00000540537 STAP2Q9UGK3 403 aa25.07■■□□□ 1.6
CHFR-217ENST00000540537 SLC15A5A6NIM6 579 aa25.06■■□□□ 1.6
CHFR-217ENST00000540537 SLC34A2O95436 690 aa25.06■■□□□ 1.6
CHFR-217ENST00000540537 APPP05067 770 aa25.06■■□□□ 1.6
CHFR-217ENST00000540537 RASA1P20936 1047 aa25.06■■□□□ 1.6
CHFR-217ENST00000540537 WDR78Q5VTH9 848 aa25.06■■□□□ 1.6
CHFR-217ENST00000540537 IFNL3Q8IZI9 196 aa25.06■■□□□ 1.6
CHFR-217ENST00000540537 SEC62Q99442 399 aaKnown RBP25.06■■□□□ 1.6
CHFR-217ENST00000540537 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.06■■□□□ 1.6
CHFR-217ENST00000540537 MKNK2Q9HBH9 465 aa25.06■■□□□ 1.6
CHFR-217ENST00000540537 PARP14Q460N5 1801 aa25.06■■□□□ 1.6
CHFR-217ENST00000540537 FLOT1O75955 427 aa25.05■■□□□ 1.6
CHFR-217ENST00000540537 PTPREP23469 700 aa25.05■■□□□ 1.6
CHFR-217ENST00000540537 ATP2B2Q01814 1243 aa25.05■■□□□ 1.6
CHFR-217ENST00000540537 NACAP1Q9BZK3 213 aa25.05■■□□□ 1.6
CHFR-217ENST00000540537 ZNF287Q9HBT7 754 aa25.05■■□□□ 1.6
CHFR-217ENST00000540537 GOPCQ9HD26 462 aa25.05■■□□□ 1.6
CHFR-217ENST00000540537 IVNS1ABPQ9Y6Y0 642 aa25.05■■□□□ 1.6
CHFR-217ENST00000540537 PRKAR2AP13861 404 aaKnown RBP25.04■■□□□ 1.6
CHFR-217ENST00000540537 GRB14Q14449 540 aa25.04■■□□□ 1.6
CHFR-217ENST00000540537 MOV10L1Q9BXT6 1211 aaKnown RBP25.04■■□□□ 1.6
CHFR-217ENST00000540537 SPATC1LQ9H0A9 340 aa25.04■■□□□ 1.6
CHFR-217ENST00000540537 PDE1AP54750 535 aa25.03■■□□□ 1.6
CHFR-217ENST00000540537 CCL14Q16627 93 aa25.03■■□□□ 1.6
CHFR-217ENST00000540537 STK11IPQ8N1F8 1099 aa25.03■■□□□ 1.6
CHFR-217ENST00000540537 ANKLE1Q8NAG6 615 aa25.03■■□□□ 1.6
CHFR-217ENST00000540537 SHCBP1Q8NEM2 672 aa25.03■■□□□ 1.6
CHFR-217ENST00000540537 DPF3Q92784 378 aa25.03■■□□□ 1.6
CHFR-217ENST00000540537 EVI5LQ96CN4 794 aa25.03■■□□□ 1.6
CHFR-217ENST00000540537 HOXC6P09630 235 aa25.02■■□□□ 1.6
CHFR-217ENST00000540537 CACNB2Q08289 660 aaPredicted RBP25.02■■□□□ 1.6
CHFR-217ENST00000540537 ATG4CQ96DT6 458 aa25.02■■□□□ 1.6
CHFR-217ENST00000540537 RWDD1Q9H446 243 aaPredicted RBP25.02■■□□□ 1.6
CHFR-217ENST00000540537 NYAP2Q9P242 653 aa25.02■■□□□ 1.6
CHFR-217ENST00000540537 ZNF236Q9UL36 1845 aa25.02■■□□□ 1.6
CHFR-217ENST00000540537 NAPBQ9H115 298 aa25.01■■□□□ 1.59
CHFR-217ENST00000540537 IGKV6D-41A0A0C4DH26 115 aa25■■□□□ 1.59
CHFR-217ENST00000540537 H0YGN5 161 aa25■■□□□ 1.59
CHFR-217ENST00000540537 STRNO43815 780 aa25■■□□□ 1.59
CHFR-217ENST00000540537 ERCC3P19447 782 aa25■■□□□ 1.59
CHFR-217ENST00000540537 SMC5Q8IY18 1101 aa25■■□□□ 1.59
CHFR-217ENST00000540537 ZNF444Q8N0Y2 327 aaPredicted RBP25■■□□□ 1.59
CHFR-217ENST00000540537 ADAMTS5Q9UNA0 930 aa25■■□□□ 1.59
CHFR-217ENST00000540537 MFSD14CQ5VZR4 134 aa24.99■■□□□ 1.59
CHFR-217ENST00000540537 NECAB2Q7Z6G3 386 aa24.99■■□□□ 1.59
CHFR-217ENST00000540537 TICAM2Q86XR7 235 aa24.99■■□□□ 1.59
CHFR-217ENST00000540537 PAWRQ96IZ0 340 aaKnown RBP24.99■■□□□ 1.59
CHFR-217ENST00000540537 MROH8Q9H579 483 aa24.99■■□□□ 1.59
CHFR-217ENST00000540537 OGDHLQ9ULD0 1010 aa24.99■■□□□ 1.59
CHFR-217ENST00000540537 MYH4Q9Y623 1939 aa24.99■■□□□ 1.59
CHFR-217ENST00000540537 PRDM1O75626 825 aa24.98■■□□□ 1.59
CHFR-217ENST00000540537 SLC3A2P08195 630 aaKnown RBP24.98■■□□□ 1.59
CHFR-217ENST00000540537 PDE4BQ07343 736 aa24.98■■□□□ 1.59
CHFR-217ENST00000540537 PLS1Q14651 629 aa24.98■■□□□ 1.59
CHFR-217ENST00000540537 FAM83BQ5T0W9 1011 aa24.98■■□□□ 1.59
CHFR-217ENST00000540537 FLRT1Q9NZU1 646 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms