RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ATP10DQ9P241 1426 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 ABCC4O15439 1325 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 DDX39AO00148 427 aaKnown RBP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 GAS7O60861 476 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 FAM98CQ17RN3 349 aaKnown RBP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 CDC37L1Q7L3B6 337 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 MAEAQ7L5Y9 396 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 TRIML1Q8N9V2 468 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 IPO4Q8TEX9 1081 aaKnown RBP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 USP40Q9NVE5 1235 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 PCDHA12Q9UN75 941 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 EFCAB6Q5THR3 1501 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 ZYXQ15942 572 aaKnown RBP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 ARHGEF16Q5VV41 709 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 MCF2L2Q86YR7 1114 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 DNAJC10Q8IXB1 793 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 ZSCAN10Q96SZ4 725 aaPredicted RBP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 SPC25Q9HBM1 224 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 VPS54Q9P1Q0 977 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 USP21Q9UK80 565 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 CFBP00751 764 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 TCP10Q12799 353 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 RASA3Q14644 834 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 SPHKAPQ2M3C7 1700 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 KMT5BQ4FZB7 885 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 DNAJC21Q5F1R6 531 aaKnown RBP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 DYMQ7RTS9 669 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 PEX26Q7Z412 305 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 ARHGAP24Q8N264 748 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 KLHDC4Q8TBB5 520 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 NFE2L3Q9Y4A8 694 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 CHD1O14646 1710 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 PABPC4Q13310 644 aaKnown RBP eCLIP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 AMFRQ9UKV5 643 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 CSADQ9Y600 493 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 DDAH1O94760 285 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 IRX3P78415 501 aaPredicted RBP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 ATP2A3Q93084 1043 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 ASIC3Q9UHC3 531 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 STAT1P42224 750 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 BEND3Q5T5X7 828 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 DENND2CQ68D51 928 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 MAPKAPK5Q8IW41 473 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 IFNL3Q8IZI9 196 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 BLIDQ8IZY5 108 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 ZSWIM6Q9HCJ5 1215 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 PPANQ9NQ55 473 aaKnown RBP7.17□□□□□ -1.26
LSAMP-207ENST00000539563 PHKG2P15735 406 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 C10orf67Q8IYJ2 551 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 CARD6Q9BX69 1037 aa7.17□□□□□ -1.26
LSAMP-207ENST00000539563 SARNPP82979 210 aaKnown RBP7.16□□□□□ -1.26
LSAMP-207ENST00000539563 DCAF15Q66K64 600 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 CACNA2D3Q8IZS8 1091 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 OTUD7AQ8TE49 926 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-207ENST00000539563 SSH3Q8TE77 659 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 KIAA1468Q9P260 1216 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 ZCCHC11Q5TAX3 1644 aaKnown RBP7.16□□□□□ -1.26
LSAMP-207ENST00000539563 HECW2Q9P2P5 1572 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 MYOCDQ8IZQ8 938 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 CCDC89Q8N998 374 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 MIS12Q9H081 205 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 CTTNBP2NLQ9P2B4 639 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 TRPC6Q9Y210 931 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 TMEM2Q9UHN6 1383 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 PPIP5K2O43314 1243 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 XRCC5P13010 732 aaKnown RBP7.16□□□□□ -1.26
LSAMP-207ENST00000539563 MAP7Q14244 749 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 TPH2Q8IWU9 490 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 CPXCR1Q8N123 301 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 MAGEF1Q9HAY2 307 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 TAB2Q9NYJ8 693 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 SLAIN2Q9P270 581 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 ZHX1Q9UKY1 873 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-207ENST00000539563 TRIM58Q8NG06 486 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 HAUS1Q96CS2 278 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 RSRC1Q96IZ7 334 aaKnown RBP7.16□□□□□ -1.26
LSAMP-207ENST00000539563 NACA2Q9H009 215 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 PANK4Q9NVE7 773 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 KCNJ14Q9UNX9 436 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 JAK2O60674 1132 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 HSPA2P54652 639 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 CCDC62Q6P9F0 684 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 POTEDQ86YR6 584 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 DEPTORQ8TB45 409 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 LMBRD1Q9NUN5 540 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 TET3O43151 1660 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 ADCY10Q96PN6 1610 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 CEP104O60308 925 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 PCCAP05165 728 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-207ENST00000539563 MTX1Q13505 466 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 ME3Q16798 604 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 CEP85LQ5SZL2 805 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 GRK7Q8WTQ7 553 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 P3H4Q92791 437 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 ZNF496Q96IT1 587 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-207ENST00000539563 PSTPIP2Q9H939 334 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 TBC1D7Q9P0N9 293 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms