RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.66
CDH13-204ENST00000539548 VPS54Q9P1Q0 977 aa10.96□□□□□ -0.66
CDH13-204ENST00000539548 TNKSO95271 1327 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 SNAP23O00161 211 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 CASP1P29466 404 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 IL6STP40189 918 aaPredicted RBP10.95□□□□□ -0.66
CDH13-204ENST00000539548 BCAMP50895 628 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 FXR1P51114 621 aaKnown RBP eCLIP10.95□□□□□ -0.66
CDH13-204ENST00000539548 IRX5P78411 483 aaPredicted RBP10.95□□□□□ -0.66
CDH13-204ENST00000539548 HDXQ7Z353 690 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 DZIP3Q86Y13 1208 aaKnown RBP10.95□□□□□ -0.66
CDH13-204ENST00000539548 MIGA1Q8NAN2 632 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 NEK11Q8NG66 645 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 TNFRSF25Q93038 417 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 ZSWIM4Q9H7M6 989 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 RBM28Q9NW13 759 aaKnown RBP10.95□□□□□ -0.66
CDH13-204ENST00000539548 LRP2BPQ9P2M1 347 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 MYO1AQ9UBC5 1043 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 PUF60Q9UHX1 559 aaKnown RBP10.95□□□□□ -0.66
CDH13-204ENST00000539548 ZBTB1Q9Y2K1 713 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 V9GY48 417 aaPredicted RBP10.95□□□□□ -0.66
CDH13-204ENST00000539548 ABCA3Q99758 1704 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 SOS2Q07890 1332 aaPredicted RBP10.95□□□□□ -0.66
CDH13-204ENST00000539548 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
CDH13-204ENST00000539548 ERLIN1O75477 346 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 TUBBP07437 444 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 CYP7A1P22680 504 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 ATP2C1P98194 919 aaPredicted RBP10.94□□□□□ -0.66
CDH13-204ENST00000539548 KRT31Q15323 416 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 E2F4Q16254 413 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 WHAMMP3Q1A5X7 153 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 SLC35F6Q8N357 371 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 ENAHQ8N8S7 591 aaPredicted RBP10.94□□□□□ -0.66
CDH13-204ENST00000539548 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
CDH13-204ENST00000539548 PYM1Q9BRP8 204 aaKnown RBP10.94□□□□□ -0.66
CDH13-204ENST00000539548 BRMS1Q9HCU9 246 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 RWDD2AQ9UIY3 292 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 ADAM21Q9UKJ8 722 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 DLEC1Q9Y238 1755 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 COL22A1Q8NFW1 1626 aaPredicted RBP10.94□□□□□ -0.66
CDH13-204ENST00000539548 MINDY4BA8MYZ0 360 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 H3BQF6 201 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 CALM1P0DP23 149 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 CALM2P0DP24 149 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 CALM3P0DP25 149 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 SPAG1Q07617 926 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 TRIM14Q14142 442 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 ZNF174Q15697 407 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 TTC38Q5R3I4 469 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 CYP26C1Q6V0L0 522 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 CATIPQ7Z7H3 387 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 SMYD4Q8IYR2 804 aaPredicted RBP10.94□□□□□ -0.66
CDH13-204ENST00000539548 IQUBQ8NA54 791 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 NAPGQ99747 312 aaPredicted RBP10.94□□□□□ -0.66
CDH13-204ENST00000539548 L1RE1Q9UN81 338 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 CTNND2Q9UQB3 1225 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 BCL9O00512 1426 aa10.94□□□□□ -0.66
CDH13-204ENST00000539548 SLIT2O94813 1529 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 MYH13Q9UKX3 1938 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 WNT7AO00755 349 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 N4BP3O15049 544 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 GTPBP6O43824 516 aaPredicted RBP10.93□□□□□ -0.66
CDH13-204ENST00000539548 PRDM1O75626 825 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 FGRP09769 529 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 ARHGAP25P42331 645 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 COPB1P53618 953 aaKnown RBP10.93□□□□□ -0.66
CDH13-204ENST00000539548 ERVK-24P63145 666 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 PTGDRQ13258 359 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 NPY5RQ15761 445 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 RRAGBQ5VZM2 374 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 PNKPQ96T60 521 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 ABHD10Q9NUJ1 306 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 TMEM51Q9NW97 253 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 XDHP47989 1333 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 XIRP1Q702N8 1843 aaKnown RBP10.93□□□□□ -0.66
CDH13-204ENST00000539548 MAGEB6P1A0A0J9YX57 407 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 TRAPPC10P48553 1259 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 TROAPQ12815 778 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 IFIT1BQ5T764 474 aaKnown RBP10.93□□□□□ -0.66
CDH13-204ENST00000539548 SUSD4Q5VX71 490 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 PDXDC2PQ6P474 469 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 ACRBPQ8NEB7 543 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 ANKRD20A12PQ8NF67 263 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 GBP3Q9H0R5 595 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 TSPYL1Q9H0U9 437 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 DISP2A7MBM2 1401 aa10.93□□□□□ -0.66
CDH13-204ENST00000539548 CTAGE15A4D2H0 777 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 EIF3JO75822 258 aaKnown RBP10.92□□□□□ -0.66
CDH13-204ENST00000539548 PLEKHA8P1O95397 391 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 CTAGE8P0CG41 777 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 PCP11498 1178 aaKnown RBP10.92□□□□□ -0.66
CDH13-204ENST00000539548 CCT6AP40227 531 aaKnown RBP10.92□□□□□ -0.66
CDH13-204ENST00000539548 TCP11X2Q5H9J9 407 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 ADGRA1Q86SQ6 560 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 CTAGE6Q86UF2 777 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 CTAGE4Q8IX94 777 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 SDR42E1Q8WUS8 393 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 CDC5LQ99459 802 aaKnown RBP10.92□□□□□ -0.66
CDH13-204ENST00000539548 BRIP1Q9BX63 1249 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 ABCB6Q9NP58 842 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms