RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MMP19Q99542 508 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SELENOOQ9BVL4 669 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 CHMP4AQ9BY43 222 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SLC13A1Q9BZW2 595 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SLC52A1Q9NWF4 448 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF214Q9UL59 606 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 PPP1R9AQ9ULJ8 1098 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 A0A1W2PQH9 124 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 OIP5O43482 229 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 RFPL1O75677 317 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 EPXP11678 715 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 EIF6P56537 245 aaKnown RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 CYP27A1Q02318 531 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 PCDH1Q08174 1060 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 TMEM240Q5SV17 173 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 RNF187Q5TA31 235 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 OVOS1Q6IE37 1185 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 RINLQ6ZS11 566 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 STRA8Q7Z7C7 330 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 TTC6Q86TZ1 520 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SCUBE1Q8IWY4 988 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 RNF214Q8ND24 703 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 UBASH3BQ8TF42 649 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 TMEM40Q8WWA1 233 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 LENG1Q96BZ8 264 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 ACSF2Q96CM8 615 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 MAML3Q96JK9 1138 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 EXOC2Q96KP1 924 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 PTPN18Q99952 460 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 TRIM8Q9BZR9 551 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SLKQ9H2G2 1235 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF69Q9UC07 566 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SUSD2Q9UGT4 822 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 LOC100289279A0A1B0GTE1 492 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 KRBA1A5PL33 1030 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 ANKRD62A6NC57 917 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 CHURC1-FNTBB4DL54 471 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 FOXN3O00409 490 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 ARHGEF15O94989 841 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 HTR3BO95264 441 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 CHGBP05060 677 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 HOXC12P31275 282 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 L1CAMP32004 1257 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 PMS1P54277 932 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 SUMO1P63165 101 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 PURAQ00577 322 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 ADCY1Q08828 1119 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 PRR16Q569H4 304 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 PPM1JQ5JR12 505 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 WIPI1Q5MNZ9 446 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 FBXW10Q5XX13 1052 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 DCAF15Q66K64 600 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 TTLL5Q6EMB2 1281 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 LLGL2Q6P1M3 1020 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 IGF2-ASQ6U949 168 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 C16orf86Q6ZW13 317 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 TMEM192Q8IY95 271 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 FAM43AQ8N2R8 423 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 AGGF1Q8N302 714 aaeCLIP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 TTLL11Q8NHH1 800 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 APPBP2Q92624 585 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 TRIM11Q96F44 468 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 NUP88Q99567 741 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 NXF1Q9UBU9 619 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 NPFFR2Q9Y5X5 522 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 WASH4PA8MWX3 477 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 ZEB2O60315 1214 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 UBOX5O94941 541 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 TIAF1O95411 115 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF865P0CJ78 1059 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 NID1P14543 1247 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 LIG1P18858 919 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 MAOBP27338 520 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 GTF2A2P52657 109 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF460Q14592 562 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 LRRC41Q15345 812 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 PRSS53Q2L4Q9 553 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 AXDND1Q5T1B0 1012 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 LARP1BQ659C4 914 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 DENND5AQ6IQ26 1287 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 MCATQ8IVS2 390 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 TSR2Q969E8 191 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 WDR18Q9BV38 432 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 COL25A1Q9BXS0 654 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 UBE2OQ9C0C9 1292 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 IFT57Q9NWB7 429 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 PRAMEF27A3QJZ7 478 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 BLACEA4D250 179 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 M0R082 166 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 LRIG2O94898 1065 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 ALX3O95076 343 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 PRNPP04156 253 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 HRGP04196 525 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 GSTP1P09211 210 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 AKAP5P24588 427 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 MCM4P33991 863 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 RAC1P63000 192 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 HABP4Q5JVS0 413 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 SNAP47Q5SQN1 464 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 LCE5AQ5TCM9 118 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms