RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 CDAN1Q8IWY9 1227 aa17.92■□□□□ 0.46
VAMP1-207ENST00000539047 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
VAMP1-207ENST00000539047 SMARCC2Q8TAQ2 1214 aa17.92■□□□□ 0.46
VAMP1-207ENST00000539047 DDX11Q96FC9 970 aa17.92■□□□□ 0.46
VAMP1-207ENST00000539047 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.92■□□□□ 0.46
VAMP1-207ENST00000539047 RBM27Q9P2N5 1060 aaKnown RBP17.92■□□□□ 0.46
VAMP1-207ENST00000539047 MTMR7Q9Y216 660 aa17.92■□□□□ 0.46
VAMP1-207ENST00000539047 WDR33Q9C0J8 1336 aaKnown RBP17.92■□□□□ 0.46
VAMP1-207ENST00000539047 PPP1R12BO60237 982 aaPredicted RBP17.91■□□□□ 0.46
VAMP1-207ENST00000539047 EEF2P13639 858 aaKnown RBP17.91■□□□□ 0.46
VAMP1-207ENST00000539047 IFNAR1P17181 557 aa17.91■□□□□ 0.46
VAMP1-207ENST00000539047 ASPRV1Q53RT3 343 aa17.91■□□□□ 0.46
VAMP1-207ENST00000539047 GOPCQ9HD26 462 aa17.91■□□□□ 0.46
VAMP1-207ENST00000539047 PICK1Q9NRD5 415 aa17.91■□□□□ 0.46
VAMP1-207ENST00000539047 ORC3Q9UBD5 711 aaPredicted RBP17.91■□□□□ 0.46
VAMP1-207ENST00000539047 ISY1Q9ULR0 285 aaKnown RBP17.91■□□□□ 0.46
VAMP1-207ENST00000539047 ADM5C9JUS6 153 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 H3BQV1 296 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 RAD21O60216 631 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 JAK2O60674 1132 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 TOMM70O94826 608 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 SLURP2P0DP57 97 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 CDC27P30260 824 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 ADD1P35611 737 aaKnown RBP17.9■□□□□ 0.46
VAMP1-207ENST00000539047 DDIT3P35638 169 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 TRIM29Q14134 588 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 CCDC96Q2M329 555 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 LARP1BQ659C4 914 aaKnown RBP17.9■□□□□ 0.46
VAMP1-207ENST00000539047 TMTC3Q6ZXV5 915 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 CDC37L1Q7L3B6 337 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 WRNIP1Q96S55 665 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 FEZ1Q99689 392 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 SLC26A6Q9BXS9 759 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 OTOFQ9HC10 1997 aa17.9■□□□□ 0.46
VAMP1-207ENST00000539047 VPS37CA5D8V6 355 aaPredicted RBP17.89■□□□□ 0.45
VAMP1-207ENST00000539047 FMNL1O95466 1100 aaPredicted RBP17.89■□□□□ 0.45
VAMP1-207ENST00000539047 XBP1P17861 261 aa17.89■□□□□ 0.45
VAMP1-207ENST00000539047 IREB2P48200 963 aaKnown RBP17.89■□□□□ 0.45
VAMP1-207ENST00000539047 GPATCH4Q5T3I0 446 aaKnown RBP17.89■□□□□ 0.45
VAMP1-207ENST00000539047 CLEC10AQ8IUN9 316 aa17.89■□□□□ 0.45
VAMP1-207ENST00000539047 DCAF4Q8WV16 495 aa17.89■□□□□ 0.45
VAMP1-207ENST00000539047 MKL1Q969V6 931 aa17.89■□□□□ 0.45
VAMP1-207ENST00000539047 RNF26Q9BY78 433 aaPredicted RBP17.89■□□□□ 0.45
VAMP1-207ENST00000539047 RRAGCQ9HB90 399 aa17.89■□□□□ 0.45
VAMP1-207ENST00000539047 AS3MTQ9HBK9 375 aa17.89■□□□□ 0.45
VAMP1-207ENST00000539047 STX6O43752 255 aa17.88■□□□□ 0.45
VAMP1-207ENST00000539047 DEXIO95424 95 aa17.88■□□□□ 0.45
VAMP1-207ENST00000539047 CTDNEP1O95476 244 aa17.88■□□□□ 0.45
VAMP1-207ENST00000539047 SCYL3Q8IZE3 742 aa17.88■□□□□ 0.45
VAMP1-207ENST00000539047 GMCL1P1Q8NEA9 526 aa17.88■□□□□ 0.45
VAMP1-207ENST00000539047 CDCA5Q96FF9 252 aa17.88■□□□□ 0.45
VAMP1-207ENST00000539047 SSC5DA1L4H1 1573 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 PHF20L1A8MW92 1017 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 PDHBP11177 359 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 SYT1P21579 422 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 GUCY1A2P33402 732 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 TTLL12Q14166 644 aaPredicted RBP17.87■□□□□ 0.45
VAMP1-207ENST00000539047 PRAMEF18Q5VWM3 479 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 LDHDQ86WU2 507 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 PHKBQ93100 1093 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 C8orf76Q96K31 380 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 FAM217BQ9NTX9 383 aaPredicted RBP17.87■□□□□ 0.45
VAMP1-207ENST00000539047 ATP6V1DQ9Y5K8 247 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 CSADQ9Y600 493 aa17.87■□□□□ 0.45
VAMP1-207ENST00000539047 PAPPA2Q9BXP8 1791 aa17.86■□□□□ 0.45
VAMP1-207ENST00000539047 USP17L5A8MUK1 530 aa17.86■□□□□ 0.45
VAMP1-207ENST00000539047 SLC1A4P43007 532 aa17.86■□□□□ 0.45
VAMP1-207ENST00000539047 RRP1BQ14684 758 aaKnown RBP17.86■□□□□ 0.45
VAMP1-207ENST00000539047 NTRK3Q16288 839 aa17.86■□□□□ 0.45
VAMP1-207ENST00000539047 SLFN13Q68D06 897 aa17.86■□□□□ 0.45
VAMP1-207ENST00000539047 CCDC82Q8N4S0 544 aa17.86■□□□□ 0.45
VAMP1-207ENST00000539047 ALG1Q9BT22 464 aa17.86■□□□□ 0.45
VAMP1-207ENST00000539047 SEC63Q9UGP8 760 aaKnown RBP17.86■□□□□ 0.45
VAMP1-207ENST00000539047 MAD2L2Q9UI95 211 aa17.86■□□□□ 0.45
VAMP1-207ENST00000539047 ZNF112Q9UJU3 913 aa17.86■□□□□ 0.45
VAMP1-207ENST00000539047 MYH15Q9Y2K3 1946 aa17.86■□□□□ 0.45
VAMP1-207ENST00000539047 PALM3A6NDB9 673 aaPredicted RBP17.85■□□□□ 0.45
VAMP1-207ENST00000539047 POTECB2RU33 542 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 KLRF2D3W0D1 207 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 PRPF3O43395 683 aaKnown RBP17.85■□□□□ 0.45
VAMP1-207ENST00000539047 PLEKHA8P1O95397 391 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 SMARCA1P28370 1054 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 SHROOM1Q2M3G4 852 aaPredicted RBP17.85■□□□□ 0.45
VAMP1-207ENST00000539047 NOL9Q5SY16 702 aaKnown RBP17.85■□□□□ 0.45
VAMP1-207ENST00000539047 ARMC9Q7Z3E5 817 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 RGS22Q8NE09 1264 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 CNTNAP5Q8WYK1 1306 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 KLRG1Q96E93 195 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 GMCL1Q96IK5 515 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 GBP4Q96PP9 640 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 SPZ1Q9BXG8 430 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 TMX2Q9Y320 296 aa17.85■□□□□ 0.45
VAMP1-207ENST00000539047 FRMPD2Q68DX3 1309 aaPredicted RBP17.84■□□□□ 0.45
VAMP1-207ENST00000539047 SNHG28P0DPA3 235 aa17.84■□□□□ 0.45
VAMP1-207ENST00000539047 ZSCAN22P10073 491 aaPredicted RBP17.84■□□□□ 0.45
VAMP1-207ENST00000539047 INPP5BP32019 993 aa17.84■□□□□ 0.45
VAMP1-207ENST00000539047 ZNF543Q08ER8 600 aa17.84■□□□□ 0.45
VAMP1-207ENST00000539047 IKQ13123 557 aaPredicted RBP17.84■□□□□ 0.45
VAMP1-207ENST00000539047 PRKG1Q13976 671 aa17.84■□□□□ 0.45
VAMP1-207ENST00000539047 USP17L2Q6R6M4 530 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms