RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZNF654Q8IZM8 581 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 TRIML1Q8N9V2 468 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 CDC5LQ99459 802 aaKnown RBP16.62■□□□□ 0.25
CDCA3-207ENST00000538862 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 TMX4Q9H1E5 349 aaPredicted RBP16.62■□□□□ 0.25
CDCA3-207ENST00000538862 DACH1Q9UI36 760 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 SRPRBQ9Y5M8 271 aaKnown RBP16.62■□□□□ 0.25
CDCA3-207ENST00000538862 SARSP49591 514 aaKnown RBP16.62■□□□□ 0.25
CDCA3-207ENST00000538862 POSTNQ15063 836 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 CFAP100Q494V2 611 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 MLKLQ8NB16 471 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 DPF2Q92785 391 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 UBAC1Q9BSL1 405 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 RNF26Q9BY78 433 aaPredicted RBP16.62■□□□□ 0.25
CDCA3-207ENST00000538862 FANCLQ9NW38 375 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 TAOK2Q9UL54 1235 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 LRRC37AA6NMS7 1700 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 CYP7A1P22680 504 aa16.61■□□□□ 0.25
CDCA3-207ENST00000538862 C1QTNF8P60827 252 aa16.61■□□□□ 0.25
CDCA3-207ENST00000538862 NAA30Q147X3 362 aaPredicted RBP16.61■□□□□ 0.25
CDCA3-207ENST00000538862 SEC23AQ15436 765 aa16.61■□□□□ 0.25
CDCA3-207ENST00000538862 FCHSD1Q86WN1 690 aa16.61■□□□□ 0.25
CDCA3-207ENST00000538862 ESR2Q92731 530 aa16.61■□□□□ 0.25
CDCA3-207ENST00000538862 GNL3LQ9NVN8 582 aaKnown RBP16.61■□□□□ 0.25
CDCA3-207ENST00000538862 ZNF804BA4D1E1 1349 aa16.61■□□□□ 0.25
CDCA3-207ENST00000538862 MYH6P13533 1939 aa16.61■□□□□ 0.25
CDCA3-207ENST00000538862 DDNO94850 711 aaPredicted RBP16.6■□□□□ 0.25
CDCA3-207ENST00000538862 TOP1P11387 765 aaKnown RBP16.6■□□□□ 0.25
CDCA3-207ENST00000538862 BMP6P22004 513 aa16.6■□□□□ 0.25
CDCA3-207ENST00000538862 UTP14CQ5TAP6 766 aaKnown RBP16.6■□□□□ 0.25
CDCA3-207ENST00000538862 DPP8Q6V1X1 898 aaPredicted RBP16.6■□□□□ 0.25
CDCA3-207ENST00000538862 MIGA1Q8NAN2 632 aa16.6■□□□□ 0.25
CDCA3-207ENST00000538862 ZNF397Q8NF99 534 aaPredicted RBP16.6■□□□□ 0.25
CDCA3-207ENST00000538862 MAN1B1Q9UKM7 699 aa16.6■□□□□ 0.25
CDCA3-207ENST00000538862 ZNF541Q9H0D2 1346 aa16.6■□□□□ 0.25
CDCA3-207ENST00000538862 MAGEB6P1A0A0J9YX57 407 aa16.6■□□□□ 0.25
CDCA3-207ENST00000538862 POLR2DO15514 142 aaKnown RBP16.6■□□□□ 0.25
CDCA3-207ENST00000538862 ZSCAN20P17040 1043 aaPredicted RBP16.6■□□□□ 0.25
CDCA3-207ENST00000538862 XBP1P17861 261 aa16.6■□□□□ 0.25
CDCA3-207ENST00000538862 RPS8P62241 208 aaKnown RBP16.6■□□□□ 0.25
CDCA3-207ENST00000538862 PDE4BQ07343 736 aa16.6■□□□□ 0.25
CDCA3-207ENST00000538862 AOC3Q16853 763 aa16.6■□□□□ 0.25
CDCA3-207ENST00000538862 CT47A1Q5JQC4 288 aaPredicted RBP16.6■□□□□ 0.25
CDCA3-207ENST00000538862 ENOX1Q8TC92 643 aaKnown RBP16.6■□□□□ 0.25
CDCA3-207ENST00000538862 NUP133Q8WUM0 1156 aa16.6■□□□□ 0.25
CDCA3-207ENST00000538862 PCDHB6Q9Y5E3 794 aa16.6■□□□□ 0.25
CDCA3-207ENST00000538862 DUOX1Q9NRD9 1551 aa16.59■□□□□ 0.25
CDCA3-207ENST00000538862 FOXN1O15353 648 aa16.59■□□□□ 0.25
CDCA3-207ENST00000538862 PCP11498 1178 aaKnown RBP16.59■□□□□ 0.25
CDCA3-207ENST00000538862 MORC3Q14149 939 aa16.59■□□□□ 0.25
CDCA3-207ENST00000538862 SPECC1Q5M775 1068 aa16.59■□□□□ 0.25
CDCA3-207ENST00000538862 DPY19L2Q6NUT2 758 aa16.59■□□□□ 0.25
CDCA3-207ENST00000538862 LARGE2Q8N3Y3 721 aa16.59■□□□□ 0.25
CDCA3-207ENST00000538862 SMARCE1Q969G3 411 aa16.59■□□□□ 0.25
CDCA3-207ENST00000538862 GTPBP4Q9BZE4 634 aaKnown RBP16.59■□□□□ 0.25
CDCA3-207ENST00000538862 SERTAD1Q9UHV2 236 aa16.59■□□□□ 0.25
CDCA3-207ENST00000538862 DDX41Q9UJV9 622 aaKnown RBP16.59■□□□□ 0.25
CDCA3-207ENST00000538862 PRDM4Q9UKN5 801 aa16.59■□□□□ 0.25
CDCA3-207ENST00000538862 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 PPIP5K2O43314 1243 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 ZNF18P17022 549 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 ETF1P62495 437 aaKnown RBP16.58■□□□□ 0.25
CDCA3-207ENST00000538862 AKAP17AQ02040 695 aaKnown RBP16.58■□□□□ 0.25
CDCA3-207ENST00000538862 GRIN1Q05586 938 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 DMTNQ08495 405 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 NR5A1Q13285 461 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 UBE4AQ14139 1066 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 SYT10Q6XYQ8 523 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 SPATA20Q8TB22 786 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 CCDC34Q96HJ3 373 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 TNKSO95271 1327 aa16.58■□□□□ 0.25
CDCA3-207ENST00000538862 MINDY4BA8MYZ0 360 aa16.58■□□□□ 0.24
CDCA3-207ENST00000538862 PRPF3O43395 683 aaKnown RBP16.58■□□□□ 0.24
CDCA3-207ENST00000538862 GPSM2P81274 684 aa16.58■□□□□ 0.24
CDCA3-207ENST00000538862 TBX2Q13207 712 aaPredicted RBP16.58■□□□□ 0.24
CDCA3-207ENST00000538862 GRIPAP1Q4V328 841 aa16.58■□□□□ 0.24
CDCA3-207ENST00000538862 ADGRA1Q86SQ6 560 aa16.58■□□□□ 0.24
CDCA3-207ENST00000538862 CCDC82Q8N4S0 544 aa16.58■□□□□ 0.24
CDCA3-207ENST00000538862 JDP2Q8WYK2 163 aa16.58■□□□□ 0.24
CDCA3-207ENST00000538862 GPR101Q96P66 508 aaPredicted RBP16.58■□□□□ 0.24
CDCA3-207ENST00000538862 RIOK1Q9BRS2 568 aaKnown RBP16.58■□□□□ 0.24
CDCA3-207ENST00000538862 AATFQ9NY61 560 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDCA3-207ENST00000538862 PHLPP2Q6ZVD8 1323 aa16.58■□□□□ 0.24
CDCA3-207ENST00000538862 POTECB2RU33 542 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 ARHGAP6O43182 974 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 ZSCAN12O43309 604 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 ACTN4O43707 911 aaKnown RBP16.57■□□□□ 0.24
CDCA3-207ENST00000538862 BMP15O95972 392 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 FGRP09769 529 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 ERCC5P28715 1186 aaPredicted RBP16.57■□□□□ 0.24
CDCA3-207ENST00000538862 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 SDR42E1Q8WUS8 393 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 ZSCAN10Q96SZ4 725 aaPredicted RBP16.57■□□□□ 0.24
CDCA3-207ENST00000538862 CABP5Q9NP86 173 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 RBM28Q9NW13 759 aaKnown RBP16.57■□□□□ 0.24
CDCA3-207ENST00000538862 RAI14Q9P0K7 980 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 ABCF2Q9UG63 623 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 WDR90Q96KV7 1748 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 TRIM75PA6NK02 468 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms