RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 PCDHB6Q9Y5E3 794 aa17.02■□□□□ 0.32
ATL3-203ENST00000538786 MORC2Q9Y6X9 1032 aaPredicted RBP17.02■□□□□ 0.32
ATL3-203ENST00000538786 MYO3BQ8WXR4 1341 aa17.02■□□□□ 0.31
ATL3-203ENST00000538786 AOC3Q16853 763 aa17.02■□□□□ 0.31
ATL3-203ENST00000538786 KIAA0825Q8IV33 1275 aa17.02■□□□□ 0.31
ATL3-203ENST00000538786 CEP95Q96GE4 821 aa17.02■□□□□ 0.31
ATL3-203ENST00000538786 CLIC6Q96NY7 704 aa17.02■□□□□ 0.31
ATL3-203ENST00000538786 CBX8Q9HC52 389 aa17.02■□□□□ 0.31
ATL3-203ENST00000538786 SERPINB13Q9UIV8 391 aa17.02■□□□□ 0.31
ATL3-203ENST00000538786 MYH1P12882 1939 aa17.01■□□□□ 0.31
ATL3-203ENST00000538786 ESPNB1AK53 854 aa17.01■□□□□ 0.31
ATL3-203ENST00000538786 PTPREP23469 700 aa17.01■□□□□ 0.31
ATL3-203ENST00000538786 SYKP43405 635 aa17.01■□□□□ 0.31
ATL3-203ENST00000538786 ZNF165P49910 485 aa17.01■□□□□ 0.31
ATL3-203ENST00000538786 NLRP5P59047 1200 aa17.01■□□□□ 0.31
ATL3-203ENST00000538786 DEFB132Q7Z7B7 95 aa17.01■□□□□ 0.31
ATL3-203ENST00000538786 DNAJC25Q9H1X3 360 aa17.01■□□□□ 0.31
ATL3-203ENST00000538786 FBXO2Q9UK22 296 aaPredicted RBP17.01■□□□□ 0.31
ATL3-203ENST00000538786 NOL7Q9UMY1 257 aaKnown RBP17.01■□□□□ 0.31
ATL3-203ENST00000538786 TRIM75PA6NK02 468 aa17■□□□□ 0.31
ATL3-203ENST00000538786 ADCY5O95622 1261 aa17■□□□□ 0.31
ATL3-203ENST00000538786 CALML3P27482 149 aa17■□□□□ 0.31
ATL3-203ENST00000538786 LUZP1Q86V48 1076 aa17■□□□□ 0.31
ATL3-203ENST00000538786 SLC16A10Q8TF71 515 aa17■□□□□ 0.31
ATL3-203ENST00000538786 HLA-DOAP06340 250 aa17■□□□□ 0.31
ATL3-203ENST00000538786 EARS2Q5JPH6 523 aaKnown RBP17■□□□□ 0.31
ATL3-203ENST00000538786 TTLL6Q8N841 843 aa17■□□□□ 0.31
ATL3-203ENST00000538786 ZNF579Q8NAF0 562 aaKnown RBP17■□□□□ 0.31
ATL3-203ENST00000538786 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
ATL3-203ENST00000538786 EHD4Q9H223 541 aa17■□□□□ 0.31
ATL3-203ENST00000538786 ANO10Q9NW15 660 aa17■□□□□ 0.31
ATL3-203ENST00000538786 MTMR4Q9NYA4 1195 aa17■□□□□ 0.31
ATL3-203ENST00000538786 CCDC39Q9UFE4 941 aa17■□□□□ 0.31
ATL3-203ENST00000538786 SERPINA10Q9UK55 444 aa17■□□□□ 0.31
ATL3-203ENST00000538786 MYH6P13533 1939 aa16.99■□□□□ 0.31
ATL3-203ENST00000538786 FAM205CA6NFA0 338 aa16.99■□□□□ 0.31
ATL3-203ENST00000538786 KLRF2D3W0D1 207 aa16.99■□□□□ 0.31
ATL3-203ENST00000538786 C21orf2O43822 256 aa16.99■□□□□ 0.31
ATL3-203ENST00000538786 BMP15O95972 392 aa16.99■□□□□ 0.31
ATL3-203ENST00000538786 PARP1P09874 1014 aaKnown RBP16.99■□□□□ 0.31
ATL3-203ENST00000538786 VEGFAP15692 232 aaPredicted RBP16.99■□□□□ 0.31
ATL3-203ENST00000538786 NFIAQ12857 509 aa16.99■□□□□ 0.31
ATL3-203ENST00000538786 SLC35G1Q2M3R5 365 aa16.99■□□□□ 0.31
ATL3-203ENST00000538786 FAM177A1Q8N128 213 aaPredicted RBP16.99■□□□□ 0.31
ATL3-203ENST00000538786 SPZ1Q9BXG8 430 aa16.99■□□□□ 0.31
ATL3-203ENST00000538786 RTN4Q9NQC3 1192 aaKnown RBP16.99■□□□□ 0.31
ATL3-203ENST00000538786 RRAGDQ9NQL2 400 aaPredicted RBP16.99■□□□□ 0.31
ATL3-203ENST00000538786 KIAA1468Q9P260 1216 aa16.99■□□□□ 0.31
ATL3-203ENST00000538786 SRPRBQ9Y5M8 271 aaKnown RBP16.99■□□□□ 0.31
ATL3-203ENST00000538786 IGKV6D-41A0A0C4DH26 115 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 PPIP5K2O43314 1243 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 CYTH3O43739 400 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 AKR1B1P15121 316 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 ATP2B1P20020 1258 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 SMARCA1P28370 1054 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 IDI2Q9BXS1 227 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 DHX36Q9H2U1 1008 aaKnown RBP16.98■□□□□ 0.31
ATL3-203ENST00000538786 KCNH3Q9ULD8 1083 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 MTMR7Q9Y216 660 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 SHMT1P34896 483 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 TRAPPC10P48553 1259 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 RBM5P52756 815 aaKnown RBP eCLIP16.98■□□□□ 0.31
ATL3-203ENST00000538786 CCDC93Q567U6 631 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 ZSCAN30Q86W11 494 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 RTKN2Q8IZC4 609 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 ADAMTSL1Q8N6G6 1762 aa16.98■□□□□ 0.31
ATL3-203ENST00000538786 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
ATL3-203ENST00000538786 GOLGA8HP0CJ92 632 aa16.97■□□□□ 0.31
ATL3-203ENST00000538786 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
ATL3-203ENST00000538786 C11orf57Q6ZUT1 292 aaPredicted RBP16.97■□□□□ 0.31
ATL3-203ENST00000538786 CCDC148Q8NFR7 591 aa16.97■□□□□ 0.31
ATL3-203ENST00000538786 FAM13BQ9NYF5 915 aa16.97■□□□□ 0.31
ATL3-203ENST00000538786 PCDHA4Q9UN74 947 aa16.97■□□□□ 0.31
ATL3-203ENST00000538786 AP5Z1O43299 807 aa16.96■□□□□ 0.31
ATL3-203ENST00000538786 ZRSR1Q15695 479 aaKnown RBP16.96■□□□□ 0.31
ATL3-203ENST00000538786 TTC38Q5R3I4 469 aa16.96■□□□□ 0.31
ATL3-203ENST00000538786 WWC2Q6AWC2 1192 aa16.96■□□□□ 0.31
ATL3-203ENST00000538786 BLIDQ8IZY5 108 aa16.96■□□□□ 0.31
ATL3-203ENST00000538786 ERCC4Q92889 916 aaPredicted RBP16.96■□□□□ 0.31
ATL3-203ENST00000538786 GPKOWQ92917 476 aaPredicted RBP eCLIP16.96■□□□□ 0.31
ATL3-203ENST00000538786 PSMD1Q99460 953 aa16.96■□□□□ 0.31
ATL3-203ENST00000538786 BARHL2Q9NY43 387 aa16.96■□□□□ 0.31
ATL3-203ENST00000538786 ZNF646O15015 1829 aaPredicted RBP16.96■□□□□ 0.31
ATL3-203ENST00000538786 SCN9AQ15858 1988 aa16.96■□□□□ 0.31
ATL3-203ENST00000538786 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.96■□□□□ 0.3
ATL3-203ENST00000538786 YDJCA8MPS7 323 aa16.96■□□□□ 0.3
ATL3-203ENST00000538786 PLCB2Q00722 1185 aa16.96■□□□□ 0.3
ATL3-203ENST00000538786 IQCB1Q15051 598 aa16.96■□□□□ 0.3
ATL3-203ENST00000538786 USP17L2Q6R6M4 530 aa16.96■□□□□ 0.3
ATL3-203ENST00000538786 PIK3AP1Q6ZUJ8 805 aa16.96■□□□□ 0.3
ATL3-203ENST00000538786 ZFPM1Q8IX07 1006 aa16.96■□□□□ 0.3
ATL3-203ENST00000538786 ELOA2Q8IYF1 753 aaPredicted RBP16.96■□□□□ 0.3
ATL3-203ENST00000538786 CEP57L1Q8IYX8 460 aa16.96■□□□□ 0.3
ATL3-203ENST00000538786 DAGLBQ8NCG7 672 aa16.96■□□□□ 0.3
ATL3-203ENST00000538786 CCDC17Q96LX7 622 aa16.96■□□□□ 0.3
ATL3-203ENST00000538786 NAT10Q9H0A0 1025 aaKnown RBP16.96■□□□□ 0.3
ATL3-203ENST00000538786 PCDHAC2Q9Y5I4 1007 aa16.96■□□□□ 0.3
ATL3-203ENST00000538786 STXBP3O00186 592 aa16.95■□□□□ 0.3
ATL3-203ENST00000538786 TTLL1O95922 423 aa16.95■□□□□ 0.3
ATL3-203ENST00000538786 PTMAP06454 111 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms