RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 EHBP1Q8NDI1 1231 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 SPATA20Q8TB22 786 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 WASF1Q92558 559 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 RUBCNQ92622 972 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 NEUROD6Q96NK8 337 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 C8orf37Q96NL8 207 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 PLEKHA4Q9H4M7 779 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 NWD2Q9ULI1 1742 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 LMTK3Q96Q04 1460 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 GOLGA8KD6RF30 607 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 M0R2C6 588 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 PSMD14O00487 310 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 POLR2DO15514 142 aaKnown RBP10.15□□□□□ -0.78
SNHG1-209ENST00000538654 TEX33O43247 280 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 HOXA2O43364 376 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 TBC1D12O60347 775 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 ERCC3P19447 782 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 CASP14P31944 242 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 PIP4K2AP48426 406 aaPredicted RBP10.15□□□□□ -0.78
SNHG1-209ENST00000538654 LIG3P49916 1009 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 CDKAL1Q5VV42 579 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 CAPS2Q9BXY5 557 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 UBA5Q9GZZ9 404 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 ANGEL1Q9UNK9 670 aaKnown RBP10.15□□□□□ -0.78
SNHG1-209ENST00000538654 CEP131Q9UPN4 1083 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 MYH8P13535 1937 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 SLIT3O75094 1523 aa10.15□□□□□ -0.79
SNHG1-209ENST00000538654 ZNF213O14771 459 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 FOXN1O15353 648 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 PTPREP23469 700 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 GGCXP38435 758 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 ARHGAP25P42331 645 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 SAFBQ15424 915 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNHG1-209ENST00000538654 RPS6KC1Q96S38 1066 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 HAUS4Q9H6D7 363 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 SERTAD1Q9UHV2 236 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 OPA1O60313 960 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 GYPCP04921 128 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 IARSP41252 1262 aaKnown RBP10.14□□□□□ -0.79
SNHG1-209ENST00000538654 ANTXR2P58335 489 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 MLECQ14165 292 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 NCAPH2Q6IBW4 605 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 ACRBPQ8NEB7 543 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 PCMTD1Q96MG8 357 aaPredicted RBP10.14□□□□□ -0.79
SNHG1-209ENST00000538654 TANGO6Q9C0B7 1094 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 KAT14Q9H8E8 782 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 VRTNQ9H8Y1 702 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 ABHD10Q9NUJ1 306 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 SAR1BQ9Y6B6 198 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 ECM29Q5VYK3 1845 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 TNRQ92752 1358 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 STK36Q9NRP7 1315 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 PHRF1Q9P1Y6 1649 aaKnown RBP10.14□□□□□ -0.79
SNHG1-209ENST00000538654 EIF3HO15372 352 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNHG1-209ENST00000538654 ARID4AP29374 1257 aaPredicted RBP10.14□□□□□ -0.79
SNHG1-209ENST00000538654 IL15P40933 162 aaPredicted RBP10.14□□□□□ -0.79
SNHG1-209ENST00000538654 SPAG1Q07617 926 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 RILPL1Q5EBL4 403 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 NOSTRINQ8IVI9 506 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 PRPF38AQ8NAV1 312 aaKnown RBP10.14□□□□□ -0.79
SNHG1-209ENST00000538654 BCAS4Q8TDM0 211 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 XAGE3Q8WTP9 111 aa10.14□□□□□ -0.79
SNHG1-209ENST00000538654 TMEM94Q12767 1356 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 A0A0U1RQJ8 604 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 TMEM88BA6NKF7 163 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 KIAA0754O94854 1291 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 FGAP02671 866 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 PRR29P0C7W0 189 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 HAND2P61296 217 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 DDR1Q08345 913 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 UBE3BQ7Z3V4 1068 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 ATRIPQ8WXE1 791 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 KAT2BQ92831 832 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 CABS1Q96KC9 395 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 MED15Q96RN5 788 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 SELENOOQ9BVL4 669 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 FBXO2Q9UK22 296 aaPredicted RBP10.13□□□□□ -0.79
SNHG1-209ENST00000538654 PRAMEF22A3QJZ6 481 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 ACTN4O43707 911 aaKnown RBP10.13□□□□□ -0.79
SNHG1-209ENST00000538654 FXR1P51114 621 aaKnown RBP eCLIP10.13□□□□□ -0.79
SNHG1-209ENST00000538654 TBX4P57082 545 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 ZNF827Q17R98 1081 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 PAPD7Q5XG87 772 aaKnown RBP10.13□□□□□ -0.79
SNHG1-209ENST00000538654 CCNI2Q6ZMN8 369 aaPredicted RBP10.13□□□□□ -0.79
SNHG1-209ENST00000538654 MICALCLQ6ZW33 695 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 COPS6Q7L5N1 327 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 AMOTL1Q8IY63 956 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 RAVER1Q8IY67 606 aaKnown RBP10.13□□□□□ -0.79
SNHG1-209ENST00000538654 STK11IPQ8N1F8 1099 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 OSBP2Q969R2 916 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 FAM184BQ9ULE4 1060 aa10.13□□□□□ -0.79
SNHG1-209ENST00000538654 PARP4Q9UKK3 1724 aaKnown RBP10.12□□□□□ -0.79
SNHG1-209ENST00000538654 ABL2P42684 1182 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 ERVK-24P63145 666 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 CUL4BQ13620 913 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 WASHC4Q2M389 1173 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 FMNL3Q8IVF7 1028 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 TMEM87BQ96K49 555 aa10.12□□□□□ -0.79
SNHG1-209ENST00000538654 AIFM3Q96NN9 605 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms