RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 NIM1KQ8IY84 436 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 SSH3Q8TE77 659 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 GTPBP3Q969Y2 492 aaKnown RBP7.35□□□□□ -1.23
DDB1-210ENST00000538129 PUS3Q9BZE2 481 aaKnown RBP7.35□□□□□ -1.23
DDB1-210ENST00000538129 SPEF2Q9C093 1822 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 LTBP1Q14766 1721 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 PNMA6EA0A0J9YXQ4 647 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 A0A1W2PNR3 127 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 EML1O00423 815 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 TAF5LO75529 589 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 PDE8BO95263 885 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 BRD1O95696 1058 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 GMPRP36959 345 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 KCNJ4P48050 445 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 KCNA1Q09470 495 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 UBE4AQ14139 1066 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 LRRC24Q50LG9 513 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 METTL24Q5JXM2 366 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 ATG9AQ7Z3C6 839 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 PODNQ7Z5L7 613 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 GPC2Q8N158 579 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 KLHDC4Q8TBB5 520 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 C2orf49Q9BVC5 232 aaPredicted RBP7.34□□□□□ -1.23
DDB1-210ENST00000538129 COL25A1Q9BXS0 654 aaPredicted RBP7.34□□□□□ -1.23
DDB1-210ENST00000538129 ATXN7L1Q9ULK2 861 aaPredicted RBP7.34□□□□□ -1.23
DDB1-210ENST00000538129 USTQ9Y2C2 406 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 HCN4Q9Y3Q4 1203 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 PCDHGC4Q9Y5F7 938 aa7.34□□□□□ -1.23
DDB1-210ENST00000538129 MED23Q9ULK4 1368 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 WTIPA6NIX2 430 aaPredicted RBP7.33□□□□□ -1.24
DDB1-210ENST00000538129 MX2P20592 715 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 WEE1P30291 646 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 G3BP1Q13283 466 aaKnown RBP eCLIP7.33□□□□□ -1.247e-9■■□□□ 12.7
DDB1-210ENST00000538129 AAMPQ13685 434 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 TNIP1Q15025 636 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 B4GALNT3Q6L9W6 998 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 CEP85Q6P2H3 762 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 ALDH16A1Q8IZ83 802 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 ZNF295-AS1Q8N0V1 137 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 VGLL2Q8N8G2 317 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 PHACTR1Q9C0D0 580 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 COA1Q9GZY4 146 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 NOP58Q9Y2X3 529 aaKnown RBP7.33□□□□□ -1.24
DDB1-210ENST00000538129 SUPT16HQ9Y5B9 1047 aaKnown RBP7.33□□□□□ -1.24
DDB1-210ENST00000538129 USP3Q9Y6I4 520 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 DUOX1Q9NRD9 1551 aa7.33□□□□□ -1.24
DDB1-210ENST00000538129 ATXN7O15265 892 aaPredicted RBP7.32□□□□□ -1.24
DDB1-210ENST00000538129 ECE2O60344 883 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 HMMRO75330 724 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 SURF6O75683 361 aaKnown RBP7.32□□□□□ -1.24
DDB1-210ENST00000538129 DDNO94850 711 aaPredicted RBP7.32□□□□□ -1.24
DDB1-210ENST00000538129 VEGFAP15692 232 aaPredicted RBP7.32□□□□□ -1.24
DDB1-210ENST00000538129 ATP4AP20648 1035 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 FGFR2P21802 821 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 MAP2K3P46734 347 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 CXCL9Q07325 125 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 PUM3Q15397 648 aaKnown RBP7.32□□□□□ -1.24
DDB1-210ENST00000538129 CIAPIN1Q6FI81 312 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 TXNRD3Q86VQ6 643 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 ZDHHC1Q8WTX9 485 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 FOXD4L4Q8WXT5 416 aaPredicted RBP7.32□□□□□ -1.24
DDB1-210ENST00000538129 LPIN2Q92539 896 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 CNTNAP3BQ96NU0 1288 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 GPR101Q96P66 508 aaPredicted RBP7.32□□□□□ -1.24
DDB1-210ENST00000538129 ZIC5Q96T25 663 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 CNTNAP3Q9BZ76 1288 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 ZCCHC2Q9C0B9 1178 aaKnown RBP7.32□□□□□ -1.24
DDB1-210ENST00000538129 SIL1Q9H173 461 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 DBNDD1Q9H9R9 158 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 CUEDC1Q9NWM3 386 aaPredicted RBP7.32□□□□□ -1.24
DDB1-210ENST00000538129 PA2G4Q9UQ80 394 aaKnown RBP7.32□□□□□ -1.24
DDB1-210ENST00000538129 AKAP2Q9Y2D5 859 aa7.32□□□□□ -1.24
DDB1-210ENST00000538129 IRS2Q9Y4H2 1338 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 IQCA1LA6NCM1 817 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 YDJCA8MPS7 323 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 SNAP23O00161 211 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 RAD17O75943 681 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 SASH1O94885 1247 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 VIL1P09327 827 aaKnown RBP7.31□□□□□ -1.24
DDB1-210ENST00000538129 IFIT1P09914 478 aaKnown RBP7.31□□□□□ -1.24
DDB1-210ENST00000538129 IL1R1P14778 569 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 HIBADHP31937 336 aaKnown RBP7.31□□□□□ -1.24
DDB1-210ENST00000538129 TXLNAP40222 546 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 SRSF11Q05519 484 aaKnown RBP7.31□□□□□ -1.24
DDB1-210ENST00000538129 LAMC2Q13753 1193 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 RTN1Q16799 776 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 HSP90AB4PQ58FF6 505 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 CAVIN4Q5BKX8 364 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
DDB1-210ENST00000538129 SAMD5Q5TGI4 173 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 TMEM164Q5U3C3 297 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 ZNF804AQ7Z570 1209 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 FBXO33Q7Z6M2 555 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 TIAM2Q8IVF5 1701 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 SIRT2Q8IXJ6 389 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 ZNF526Q8TF50 670 aaPredicted RBP7.31□□□□□ -1.24
DDB1-210ENST00000538129 STK32AQ8WU08 396 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 DPF2Q92785 391 aa7.31□□□□□ -1.24
DDB1-210ENST00000538129 CLP1Q92989 425 aaKnown RBP7.31□□□□□ -1.24
DDB1-210ENST00000538129 FAM84BQ96KN1 310 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms