RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 TRIM6Q9C030 488 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 ZNF652Q9Y2D9 606 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 SH3TC1Q8TE82 1336 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 MYH3P11055 1940 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 AKR1B15C9JRZ8 316 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 NTSR2O95665 410 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 TFRCP02786 760 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 TBC1D9BQ66K14 1250 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 RAD9BQ6WBX8 426 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 RASGRP2Q7LDG7 609 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 YTHDF3Q7Z739 585 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 KLC4Q9NSK0 619 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 SMTNP53814 917 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 GUCY1B3Q02153 619 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 FAM43BQ6ZT52 329 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 ZNF589Q86UQ0 364 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 SH3GL2Q99962 352 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 EHD4Q9H223 541 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 MYO1AQ9UBC5 1043 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 NARFQ9UHQ1 456 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 SAMM50Q9Y512 469 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 A0A0U1RQJ8 604 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 TARSL2A2RTX5 802 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 EYA2O00167 538 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 RTN2O75298 545 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 ITGA6P23229 1130 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 AKAP17AQ02040 695 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 IFIT5Q13325 482 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 PARP10Q53GL7 1025 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 TNNI3KQ59H18 835 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 CLEC4GQ6UXB4 293 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 PROM2Q8N271 834 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 ATRIPQ8WXE1 791 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 SEC62Q99442 399 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 FSD1Q9BTV5 496 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 MYO6Q9UM54 1294 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 FPGT-TNNI3KV9GXZ4 949 aa12.8□□□□□ -0.36
SEMA4D-221ENST00000537934 PDE8AO60658 829 aa12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 PLCB4Q15147 1175 aa12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 SLC24A3Q9HC58 644 aa12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 DBNLQ9UJU6 430 aaKnown RBP12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 TTF2Q9UNY4 1162 aaKnown RBP12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 ZPR1O75312 459 aa12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 ZNF18P17022 549 aa12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 SYKP43405 635 aa12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 INHBEP58166 350 aa12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 AMPD2Q01433 879 aa12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 ZKSCAN8Q15776 578 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 PAGR1Q9BTK6 254 aa12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 C4AP0C0L4 1744 aa12.79□□□□□ -0.36
SEMA4D-221ENST00000537934 RASSF9O75901 435 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 MICALCLQ6ZW33 695 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 DDX60Q8IY21 1712 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 A0A1B0GUA9 196 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 ANKRD33BA6NCL7 494 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 GOLGA6BA6NDN3 693 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 GOLGA8KD6RF30 607 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 HMGB1P09429 215 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 GRIK3Q13003 919 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 TXNRD1Q16881 649 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 CDC5LQ99459 802 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 DBNDD2Q9BQY9 259 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 LRRC2Q9BYS8 371 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 CARMIL3Q8ND23 1372 aa12.78□□□□□ -0.36
SEMA4D-221ENST00000537934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 NDUFAB1O14561 156 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 RFC4P35249 363 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 IL15P40933 162 aaPredicted RBP12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 SKOR1P84550 965 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 TBC1D8BQ0IIM8 1120 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 PNOCQ13519 176 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 NR1I3Q14994 352 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 ERFEQ4G0M1 354 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 CEP85LQ5SZL2 805 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 TRAPPC3LQ5T215 181 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 TTC19Q6DKK2 380 aaPredicted RBP12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 RABEP2Q9H5N1 569 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 VCPKMTQ9H867 229 aa12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.36
SEMA4D-221ENST00000537934 TIMM10P62072 90 aa12.77□□□□□ -0.37
SEMA4D-221ENST00000537934 ACTN3Q08043 901 aaPredicted RBP12.77□□□□□ -0.37
SEMA4D-221ENST00000537934 CCDC40Q4G0X9 1142 aa12.77□□□□□ -0.37
SEMA4D-221ENST00000537934 SLC27A3Q5K4L6 730 aa12.77□□□□□ -0.37
SEMA4D-221ENST00000537934 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
SEMA4D-221ENST00000537934 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
SEMA4D-221ENST00000537934 MAGEC3Q8TD91 643 aa12.77□□□□□ -0.37
SEMA4D-221ENST00000537934 SELENOOQ9BVL4 669 aa12.77□□□□□ -0.37
SEMA4D-221ENST00000537934 BSDC1Q9NW68 430 aaPredicted RBP12.77□□□□□ -0.37
SEMA4D-221ENST00000537934 HPSEQ9Y251 543 aa12.77□□□□□ -0.37
SEMA4D-221ENST00000537934 MROH7-TTC4A0A0A0MT08 1334 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 ANKRD18BA2A2Z9 1011 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 CIAO1O76071 339 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 APBA3O96018 575 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 CCT2P78371 535 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 MYSM1Q5VVJ2 828 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 C3orf67Q6ZVT6 689 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 DHX32Q7L7V1 743 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 BRAPQ7Z569 592 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 NEUROD6Q96NK8 337 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms