RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 KDM6AO15550 1401 aaPredicted RBP9.43□□□□□ -0.9
CCDC60-203ENST00000536742 POLR3AO14802 1390 aaPredicted RBP9.43□□□□□ -0.9
CCDC60-203ENST00000536742 A0A0A0MRY4 1105 aa9.43□□□□□ -0.9
CCDC60-203ENST00000536742 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
CCDC60-203ENST00000536742 IL2RBP14784 551 aa9.43□□□□□ -0.9
CCDC60-203ENST00000536742 ACPPP15309 386 aa9.43□□□□□ -0.9
CCDC60-203ENST00000536742 ELNP15502 786 aa9.43□□□□□ -0.9
CCDC60-203ENST00000536742 CABP4P57796 275 aa9.43□□□□□ -0.9
CCDC60-203ENST00000536742 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
CCDC60-203ENST00000536742 DTWD1Q8N5C7 304 aa9.43□□□□□ -0.9
CCDC60-203ENST00000536742 GLIS3Q8NEA6 775 aa9.43□□□□□ -0.9
CCDC60-203ENST00000536742 GPR101Q96P66 508 aaPredicted RBP9.43□□□□□ -0.9
CCDC60-203ENST00000536742 ABCB6Q9NP58 842 aa9.43□□□□□ -0.9
CCDC60-203ENST00000536742 PPM1HQ9ULR3 514 aa9.43□□□□□ -0.9
CCDC60-203ENST00000536742 C5P01031 1676 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 ANKRD36BQ8N2N9 1353 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 USP47Q96K76 1375 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 A0A096LPE4 126 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 A0A1W2PPZ6 126 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 C9orf172C9J069 976 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 MMP10P09238 476 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 MAP2K2P36507 400 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 PI16Q6UXB8 463 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 LDHDQ86WU2 507 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 WFDC8Q8IUA0 241 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 WNT8BQ93098 351 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 SEMA6BQ9H3T3 888 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 SOX13Q9UN79 622 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 TRIM33Q9UPN9 1127 aa9.42□□□□□ -0.9
CCDC60-203ENST00000536742 PIK3C2GO75747 1445 aa9.41□□□□□ -0.9
CCDC60-203ENST00000536742 KCNA3P22001 575 aa9.41□□□□□ -0.9
CCDC60-203ENST00000536742 FAM117BQ6P1L5 589 aa9.41□□□□□ -0.9
CCDC60-203ENST00000536742 NXPE4Q6UWF7 544 aa9.41□□□□□ -0.9
CCDC60-203ENST00000536742 OSBPL7Q9BZF2 842 aa9.41□□□□□ -0.9
CCDC60-203ENST00000536742 ABT1Q9ULW3 272 aaKnown RBP9.41□□□□□ -0.9
CCDC60-203ENST00000536742 PPME1Q9Y570 386 aa9.41□□□□□ -0.9
CCDC60-203ENST00000536742 ACEP12821 1306 aa9.4□□□□□ -0.9
CCDC60-203ENST00000536742 TAGLNQ01995 201 aaKnown RBP9.4□□□□□ -0.9
CCDC60-203ENST00000536742 NRG1Q02297 640 aaPredicted RBP9.4□□□□□ -0.9
CCDC60-203ENST00000536742 MRPL58Q14197 206 aaKnown RBP9.4□□□□□ -0.9
CCDC60-203ENST00000536742 GDF6Q6KF10 455 aaPredicted RBP9.4□□□□□ -0.9
CCDC60-203ENST00000536742 SMIM5Q71RC9 77 aa9.4□□□□□ -0.9
CCDC60-203ENST00000536742 IL22RA1Q8N6P7 574 aa9.4□□□□□ -0.9
CCDC60-203ENST00000536742 ASAP3Q8TDY4 903 aa9.4□□□□□ -0.9
CCDC60-203ENST00000536742 CAPNS2Q96L46 248 aa9.4□□□□□ -0.9
CCDC60-203ENST00000536742 CLEC4MQ9H2X3 399 aaPredicted RBP9.4□□□□□ -0.9
CCDC60-203ENST00000536742 LTBP1Q14766 1721 aa9.39□□□□□ -0.91
CCDC60-203ENST00000536742 ROCK1Q13464 1354 aa9.39□□□□□ -0.91
CCDC60-203ENST00000536742 H3BRJ5 948 aa9.39□□□□□ -0.91
CCDC60-203ENST00000536742 GRIA4P48058 902 aa9.39□□□□□ -0.91
CCDC60-203ENST00000536742 DTHD1Q6ZMT9 781 aa9.39□□□□□ -0.91
CCDC60-203ENST00000536742 CRELD1Q96HD1 420 aa9.39□□□□□ -0.91
CCDC60-203ENST00000536742 HHIPQ96QV1 700 aa9.39□□□□□ -0.91
CCDC60-203ENST00000536742 C14orf93Q9H972 538 aaKnown RBP9.39□□□□□ -0.91
CCDC60-203ENST00000536742 IQCA1LA6NCM1 817 aa9.38□□□□□ -0.91
CCDC60-203ENST00000536742 TRPA1O75762 1119 aa9.38□□□□□ -0.91
CCDC60-203ENST00000536742 DDX54Q8TDD1 881 aaKnown RBP9.38□□□□□ -0.91
CCDC60-203ENST00000536742 LACRTQ9GZZ8 138 aa9.38□□□□□ -0.91
CCDC60-203ENST00000536742 ZNF576Q9H609 170 aa9.38□□□□□ -0.91
CCDC60-203ENST00000536742 SOX17Q9H6I2 414 aaPredicted RBP9.38□□□□□ -0.91
CCDC60-203ENST00000536742 OSGEPQ9NPF4 335 aa9.38□□□□□ -0.91
CCDC60-203ENST00000536742 VTI1BQ9UEU0 232 aa9.38□□□□□ -0.91
CCDC60-203ENST00000536742 CPSF1Q10570 1443 aaKnown RBP9.38□□□□□ -0.91
CCDC60-203ENST00000536742 NSD2O96028 1365 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 RGPD5Q99666 1765 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 SLIT3O75094 1523 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 USP17L7P0C7H9 530 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 ARL4DP49703 201 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 FCGRTP55899 365 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 FAM50AQ14320 339 aaKnown RBP9.37□□□□□ -0.91
CCDC60-203ENST00000536742 ARHGEF25Q86VW2 580 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 FMR1NBQ8N0W7 255 aaPredicted RBP9.37□□□□□ -0.91
CCDC60-203ENST00000536742 NLGN1Q8N2Q7 840 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 C3orf58Q8NDZ4 430 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 LENG1Q96BZ8 264 aaPredicted RBP9.37□□□□□ -0.91
CCDC60-203ENST00000536742 CEP44Q9C0F1 390 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 TPSG1Q9NRR2 321 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 TAF1LQ8IZX4 1826 aa9.37□□□□□ -0.91
CCDC60-203ENST00000536742 TIAM2Q8IVF5 1701 aa9.36□□□□□ -0.91
CCDC60-203ENST00000536742 SELPP16109 830 aa9.36□□□□□ -0.91
CCDC60-203ENST00000536742 ST13P50502 369 aaKnown RBP9.36□□□□□ -0.91
CCDC60-203ENST00000536742 VN1R5Q7Z5H4 357 aa9.36□□□□□ -0.91
CCDC60-203ENST00000536742 KLHL23Q8NBE8 558 aa9.36□□□□□ -0.91
CCDC60-203ENST00000536742 C4BP0C0L5 1744 aa9.36□□□□□ -0.91
CCDC60-203ENST00000536742 UBR3Q6ZT12 1888 aa9.36□□□□□ -0.91
CCDC60-203ENST00000536742 IKBKEQ14164 716 aa9.35□□□□□ -0.91
CCDC60-203ENST00000536742 SPRED3Q2MJR0 410 aa9.35□□□□□ -0.91
CCDC60-203ENST00000536742 KCNH5Q8NCM2 988 aa9.35□□□□□ -0.91
CCDC60-203ENST00000536742 MRRFQ96E11 262 aaKnown RBP9.35□□□□□ -0.91
CCDC60-203ENST00000536742 MEGF6O75095 1541 aa9.35□□□□□ -0.91
CCDC60-203ENST00000536742 METTL12A8MUP2 240 aa9.34□□□□□ -0.91
CCDC60-203ENST00000536742 B3GALT4O96024 378 aa9.34□□□□□ -0.91
CCDC60-203ENST00000536742 EPHA1P21709 976 aa9.34□□□□□ -0.91
CCDC60-203ENST00000536742 PCDH1Q08174 1060 aa9.34□□□□□ -0.91
CCDC60-203ENST00000536742 GRM1Q13255 1194 aa9.34□□□□□ -0.91
CCDC60-203ENST00000536742 ADGRE1Q14246 886 aa9.34□□□□□ -0.91
CCDC60-203ENST00000536742 MBTPS1Q14703 1052 aa9.34□□□□□ -0.91
CCDC60-203ENST00000536742 CYP4F22Q6NT55 531 aa9.34□□□□□ -0.91
CCDC60-203ENST00000536742 SHISA2Q6UWI4 295 aa9.34□□□□□ -0.91
CCDC60-203ENST00000536742 TXNRD3Q86VQ6 643 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms