RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ACBD3Q9H3P7 528 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 ST7Q9NRC1 585 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 TUBE1Q9UJT0 475 aa8.88□□□□□ -0.99
CPSF7-216ENST00000536548 RTL9Q8NET4 1388 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 WDR19Q8NEZ3 1342 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 SCN9AQ15858 1988 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 E7EWF7 191 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 RIMBP2O15034 1052 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 STX10O60499 249 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 PPP6R2O75170 966 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 ANXA1P04083 346 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 FOSBP53539 338 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 MAP3K9P80192 1104 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 SREBF2Q12772 1141 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 GNL2Q13823 731 aaKnown RBP8.87□□□□□ -0.99
CPSF7-216ENST00000536548 TTLL12Q14166 644 aaPredicted RBP8.87□□□□□ -0.99
CPSF7-216ENST00000536548 ZSCAN26Q16670 478 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 ZMYM1Q5SVZ6 1142 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 MYSM1Q5VVJ2 828 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 ANO1Q5XXA6 986 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 KRBA2Q6ZNG9 492 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 RSRC2Q7L4I2 434 aaKnown RBP8.87□□□□□ -0.99
CPSF7-216ENST00000536548 CEP112Q8N8E3 955 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 FBXO18Q8NFZ0 1043 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 FBXW7Q969H0 707 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 KAZALD1Q96I82 304 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 FTOQ9C0B1 505 aaKnown RBP eCLIP8.87□□□□□ -0.99
CPSF7-216ENST00000536548 GPR108Q9NPR9 543 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 PRDM6Q9NQX0 595 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 RAPGEFL1Q9UHV5 662 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 DBNLQ9UJU6 430 aaKnown RBP8.87□□□□□ -0.99
CPSF7-216ENST00000536548 PPP2R2CQ9Y2T4 447 aa8.87□□□□□ -0.99
CPSF7-216ENST00000536548 LAMB2P55268 1798 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 MAP3K15Q6ZN16 1313 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 FAM237AA0A1B0GTK4 181 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 NEURL1BA8MQ27 555 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 CDKL5O76039 1030 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 PFKFB1P16118 471 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 CAPN2P17655 700 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 TXLNAP40222 546 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 SYKP43405 635 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 GNG11P61952 73 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 CCT2P78371 535 aaKnown RBP8.86□□□□□ -0.99
CPSF7-216ENST00000536548 GUCY1B3Q02153 619 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 PTPN12Q05209 780 aaKnown RBP8.86□□□□□ -0.99
CPSF7-216ENST00000536548 PRKG1Q13976 671 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 COL9A3Q14050 684 aaPredicted RBP8.86□□□□□ -0.99
CPSF7-216ENST00000536548 GCKRQ14397 625 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 DOK7Q18PE1 504 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 CPLX2Q6PUV4 134 aaKnown RBP8.86□□□□□ -0.99
CPSF7-216ENST00000536548 STOX1Q6ZVD7 989 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 HDXQ7Z353 690 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 SP8Q8IXZ3 490 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 DEFB123Q8N688 67 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 CCDC191Q8NCU4 936 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 HNRNPLLQ8WVV9 542 aaKnown RBP8.86□□□□□ -0.99
CPSF7-216ENST00000536548 ERCC4Q92889 916 aaPredicted RBP8.86□□□□□ -0.99
CPSF7-216ENST00000536548 BAG1Q99933 345 aaPredicted RBP8.86□□□□□ -0.99
CPSF7-216ENST00000536548 METTL22Q9BUU2 404 aaPredicted RBP8.86□□□□□ -0.99
CPSF7-216ENST00000536548 UTP14AQ9BVJ6 771 aaKnown RBP8.86□□□□□ -0.99
CPSF7-216ENST00000536548 TRIM34Q9BYJ4 488 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 MRFAP1Q9Y605 127 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 CLIC4Q9Y696 253 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 LAMB4A4D0S4 1761 aa8.86□□□□□ -0.99
CPSF7-216ENST00000536548 VWA3AA6NCI4 1184 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 IGF2BP3O00425 579 aaKnown RBP eCLIP8.85□□□□□ -0.99
CPSF7-216ENST00000536548 BIN1O00499 593 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 CPLX1O14810 134 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 ZBTB22O15209 634 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 RGL2O15211 777 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 CUTAO60888 179 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 NTSR2O95665 410 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 RPS12P25398 132 aaKnown RBP8.85□□□□□ -0.99
CPSF7-216ENST00000536548 ACTN2P35609 894 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 TFCP2Q12800 502 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 SLC39A14Q15043 492 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 RABL6Q3YEC7 729 aaPredicted RBP8.85□□□□□ -0.99
CPSF7-216ENST00000536548 SLC9C1Q4G0N8 1177 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 CT47A1Q5JQC4 288 aaPredicted RBP8.85□□□□□ -0.99
CPSF7-216ENST00000536548 CCDC129Q6ZRS4 1044 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 IFNL1Q8IU54 200 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.85□□□□□ -0.99
CPSF7-216ENST00000536548 LRRN4CLQ8ND94 238 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 NEK11Q8NG66 645 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.85□□□□□ -0.99
CPSF7-216ENST00000536548 SMARCE1Q969G3 411 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 CCDC34Q96HJ3 373 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 NLRP3Q96P20 1036 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 NAA15Q9BXJ9 866 aaKnown RBP8.85□□□□□ -0.99
CPSF7-216ENST00000536548 LRRC2Q9BYS8 371 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 PAG1Q9NWQ8 432 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 FZD1Q9UP38 647 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 STXBP5LQ9Y2K9 1186 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 PTCH2Q9Y6C5 1203 aa8.85□□□□□ -0.99
CPSF7-216ENST00000536548 A0A087WWV3 80 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-216ENST00000536548 RNF113AO15541 343 aaKnown RBP8.84□□□□□ -0.99
CPSF7-216ENST00000536548 RPS6KA5O75582 802 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 BBOX1O75936 387 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 SEC31AO94979 1220 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms