RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 USP17L20D6RJB6 530 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 PRMT2P55345 433 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 CTDSPL2Q05D32 466 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 USP17L24Q0WX57 530 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 P2RX7Q99572 595 aaKnown RBP16.03■□□□□ 0.16
RPAIN-205ENST00000536255 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.03■□□□□ 0.16
RPAIN-205ENST00000536255 TMX2Q9Y320 296 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
RPAIN-205ENST00000536255 PRDM1O75626 825 aa16.02■□□□□ 0.16
RPAIN-205ENST00000536255 EEF2P13639 858 aaKnown RBP16.02■□□□□ 0.16
RPAIN-205ENST00000536255 HOXD10P28358 340 aa16.02■□□□□ 0.16
RPAIN-205ENST00000536255 NT5C2P49902 561 aa16.02■□□□□ 0.16
RPAIN-205ENST00000536255 HAND2P61296 217 aa16.02■□□□□ 0.16
RPAIN-205ENST00000536255 CATSPERGQ6ZRH7 1159 aa16.02■□□□□ 0.16
RPAIN-205ENST00000536255 MFSD6Q6ZSS7 791 aa16.02■□□□□ 0.16
RPAIN-205ENST00000536255 GTF3C2Q8WUA4 911 aaPredicted RBP16.02■□□□□ 0.16
RPAIN-205ENST00000536255 RPAP3Q9H6T3 665 aaPredicted RBP16.02■□□□□ 0.16
RPAIN-205ENST00000536255 ANO2Q9NQ90 1003 aa16.02■□□□□ 0.16
RPAIN-205ENST00000536255 MORF4L1Q9UBU8 362 aa16.02■□□□□ 0.16
RPAIN-205ENST00000536255 SRRDQ9UH36 339 aa16.02■□□□□ 0.16
RPAIN-205ENST00000536255 PTCH2Q9Y6C5 1203 aa16.02■□□□□ 0.16
RPAIN-205ENST00000536255 TNPO2O14787 897 aaKnown RBP16.01■□□□□ 0.15
RPAIN-205ENST00000536255 ORC4O43929 436 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 FGRP09769 529 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 TSPY3P0CV98 308 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 TSPY8P0CW00 308 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 ATP2B2Q01814 1243 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 PTH1RQ03431 593 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 PPP4R3BQ5MIZ7 849 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 AKNAD1Q5T1N1 836 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 STAG1Q8WVM7 1258 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 LPAR1Q92633 364 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 MAP4K1Q92918 833 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 TOMM22Q9NS69 142 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.01■□□□□ 0.15
RPAIN-205ENST00000536255 GTF3C3Q9Y5Q9 886 aa16.01■□□□□ 0.15
RPAIN-205ENST00000536255 GREB1LQ9C091 1923 aaPredicted RBP16.01■□□□□ 0.15
RPAIN-205ENST00000536255 MYPNQ86TC9 1320 aa16■□□□□ 0.15
RPAIN-205ENST00000536255 TSPY2A6NKD2 308 aa16■□□□□ 0.15
RPAIN-205ENST00000536255 KIAA1755Q5JYT7 1200 aa16■□□□□ 0.15
RPAIN-205ENST00000536255 ARMC5Q96C12 935 aa16■□□□□ 0.15
RPAIN-205ENST00000536255 VCPKMTQ9H867 229 aa16■□□□□ 0.15
RPAIN-205ENST00000536255 TXNRD2Q9NNW7 524 aa16■□□□□ 0.15
RPAIN-205ENST00000536255 RBPJLQ9UBG7 517 aa16■□□□□ 0.15
RPAIN-205ENST00000536255 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
RPAIN-205ENST00000536255 IGKV6D-41A0A0C4DH26 115 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 RANBP6O60518 1105 aaKnown RBP15.99■□□□□ 0.15
RPAIN-205ENST00000536255 PRKCZQ05513 592 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 SLC9C1Q4G0N8 1177 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 RRP12Q5JTH9 1297 aaKnown RBP15.99■□□□□ 0.15
RPAIN-205ENST00000536255 POTEEQ6S8J3 1075 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 LBX2Q6XYB7 198 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 SPICE1Q8N0Z3 855 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 GPRC5AQ8NFJ5 357 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 PAGR1Q9BTK6 254 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 TANGO6Q9C0B7 1094 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 LSG1Q9H089 658 aaKnown RBP15.99■□□□□ 0.15
RPAIN-205ENST00000536255 CNNM2Q9H8M5 875 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 GOPCQ9HD26 462 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 NYAP2Q9P242 653 aa15.99■□□□□ 0.15
RPAIN-205ENST00000536255 SPDYE16A6NNV3 312 aaPredicted RBP15.98■□□□□ 0.15
RPAIN-205ENST00000536255 PEX10O60683 326 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 EIF5BO60841 1220 aaKnown RBP15.98■□□□□ 0.15
RPAIN-205ENST00000536255 REC8O95072 547 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 SOX10P56693 466 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 ERVK-9P63128 1117 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 ERVK-24P63145 666 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 TFAP4Q01664 338 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 TBC1D10CQ8IV04 446 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 NEDD1Q8NHV4 660 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 RAET1EQ8TD07 263 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 ESR2Q92731 530 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 COA7Q96BR5 231 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 RABGAP1Q9Y3P9 1069 aa15.98■□□□□ 0.15
RPAIN-205ENST00000536255 RBM8AQ9Y5S9 174 aaKnown RBP15.98■□□□□ 0.15
RPAIN-205ENST00000536255 MGAMO43451 1857 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 WDR46O15213 610 aaKnown RBP15.97■□□□□ 0.15
RPAIN-205ENST00000536255 TRDNQ13061 729 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 COG2Q14746 738 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 FAM47AQ5JRC9 791 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 NBPF11Q86T75 865 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 CEP95Q96GE4 821 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 ZNF333Q96JL9 665 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 KRT23Q9C075 422 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 MTMR4Q9NYA4 1195 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 CLIP2Q9UDT6 1046 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 GABRQQ9UN88 632 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 CENPFP49454 3210 aa15.97■□□□□ 0.15
RPAIN-205ENST00000536255 RAD21O60216 631 aa15.96■□□□□ 0.15
RPAIN-205ENST00000536255 CNMDO75829 334 aa15.96■□□□□ 0.15
RPAIN-205ENST00000536255 TTLL1O95922 423 aa15.96■□□□□ 0.15
RPAIN-205ENST00000536255 FLT3LGP49771 235 aa15.96■□□□□ 0.15
RPAIN-205ENST00000536255 SH3TC2Q8TF17 1288 aa15.96■□□□□ 0.15
RPAIN-205ENST00000536255 NBPF3Q9H094 633 aa15.96■□□□□ 0.15
RPAIN-205ENST00000536255 INCENPQ9NQS7 918 aa15.96■□□□□ 0.15
RPAIN-205ENST00000536255 HOXC10Q9NYD6 342 aa15.96■□□□□ 0.15
RPAIN-205ENST00000536255 SYNPO2Q9UMS6 1093 aa15.96■□□□□ 0.15
RPAIN-205ENST00000536255 TACC3Q9Y6A5 838 aa15.96■□□□□ 0.15
RPAIN-205ENST00000536255 FLOT1O75955 427 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms