RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 CATSPERGQ6ZRH7 1159 aa26.33■■□□□ 1.81
VPS37C-202ENST00000535818 NEDD1Q8NHV4 660 aa26.33■■□□□ 1.81
VPS37C-202ENST00000535818 GTF3C2Q8WUA4 911 aaPredicted RBP26.33■■□□□ 1.81
VPS37C-202ENST00000535818 TANGO6Q9C0B7 1094 aa26.33■■□□□ 1.81
VPS37C-202ENST00000535818 IL25Q9H293 177 aa26.33■■□□□ 1.81
VPS37C-202ENST00000535818 INCENPQ9NQS7 918 aa26.33■■□□□ 1.81
VPS37C-202ENST00000535818 PPP4R2Q9NY27 417 aa26.33■■□□□ 1.81
VPS37C-202ENST00000535818 NYAP2Q9P242 653 aa26.33■■□□□ 1.81
VPS37C-202ENST00000535818 ZNF213O14771 459 aa26.32■■□□□ 1.8
VPS37C-202ENST00000535818 FCGRTP55899 365 aa26.32■■□□□ 1.8
VPS37C-202ENST00000535818 SPICE1Q8N0Z3 855 aa26.32■■□□□ 1.8
VPS37C-202ENST00000535818 CEP95Q96GE4 821 aa26.32■■□□□ 1.8
VPS37C-202ENST00000535818 IGKV6D-41A0A0C4DH26 115 aa26.31■■□□□ 1.8
VPS37C-202ENST00000535818 ORC4O43929 436 aa26.31■■□□□ 1.8
VPS37C-202ENST00000535818 CAPN15O75808 1086 aa26.31■■□□□ 1.8
VPS37C-202ENST00000535818 GNRH1P01148 92 aa26.31■■□□□ 1.8
VPS37C-202ENST00000535818 BMP2KLQ5H9B9 411 aa26.31■■□□□ 1.8
VPS37C-202ENST00000535818 CLIP2Q9UDT6 1046 aa26.31■■□□□ 1.8
VPS37C-202ENST00000535818 CTNNA3Q9UI47 895 aa26.31■■□□□ 1.8
VPS37C-202ENST00000535818 LAMA4Q16363 1823 aa26.3■■□□□ 1.8
VPS37C-202ENST00000535818 WDR46O15213 610 aaKnown RBP26.3■■□□□ 1.8
VPS37C-202ENST00000535818 TTLL1O95922 423 aa26.3■■□□□ 1.8
VPS37C-202ENST00000535818 KIAA1755Q5JYT7 1200 aa26.3■■□□□ 1.8
VPS37C-202ENST00000535818 AKNAD1Q5T1N1 836 aa26.3■■□□□ 1.8
VPS37C-202ENST00000535818 MFSD6Q6ZSS7 791 aa26.3■■□□□ 1.8
VPS37C-202ENST00000535818 TRIM47Q96LD4 638 aa26.3■■□□□ 1.8
VPS37C-202ENST00000535818 PAGR1Q9BTK6 254 aa26.3■■□□□ 1.8
VPS37C-202ENST00000535818 RNF41Q9H4P4 317 aaPredicted RBP26.3■■□□□ 1.8
VPS37C-202ENST00000535818 MTMR4Q9NYA4 1195 aa26.3■■□□□ 1.8
VPS37C-202ENST00000535818 PTPN22Q9Y2R2 807 aa26.3■■□□□ 1.8
VPS37C-202ENST00000535818 TACC3Q9Y6A5 838 aa26.3■■□□□ 1.8
VPS37C-202ENST00000535818 PCP11498 1178 aaKnown RBP26.29■■□□□ 1.8
VPS37C-202ENST00000535818 HOXD10P28358 340 aa26.29■■□□□ 1.8
VPS37C-202ENST00000535818 CTGFP29279 349 aa26.29■■□□□ 1.8
VPS37C-202ENST00000535818 IMMTQ16891 758 aaKnown RBP26.29■■□□□ 1.8
VPS37C-202ENST00000535818 PPP4R3BQ5MIZ7 849 aa26.29■■□□□ 1.8
VPS37C-202ENST00000535818 TBC1D10CQ8IV04 446 aa26.29■■□□□ 1.8
VPS37C-202ENST00000535818 HPS5Q9UPZ3 1129 aa26.29■■□□□ 1.8
VPS37C-202ENST00000535818 MYH4Q9Y623 1939 aa26.28■■□□□ 1.8
VPS37C-202ENST00000535818 SGSM2O43147 1006 aa26.28■■□□□ 1.8
VPS37C-202ENST00000535818 FGRP09769 529 aa26.28■■□□□ 1.8
VPS37C-202ENST00000535818 IFFO2Q5TF58 517 aa26.28■■□□□ 1.8
VPS37C-202ENST00000535818 STAG1Q8WVM7 1258 aa26.28■■□□□ 1.8
VPS37C-202ENST00000535818 MORF4L1Q9UBU8 362 aa26.28■■□□□ 1.8
VPS37C-202ENST00000535818 MGAMO43451 1857 aa26.28■■□□□ 1.8
VPS37C-202ENST00000535818 CCDC85CA6NKD9 419 aa26.27■■□□□ 1.8
VPS37C-202ENST00000535818 TNPO2O14787 897 aaKnown RBP26.27■■□□□ 1.8
VPS37C-202ENST00000535818 SAMD1Q6SPF0 538 aaPredicted RBP26.27■■□□□ 1.8
VPS37C-202ENST00000535818 GPRC5AQ8NFJ5 357 aa26.27■■□□□ 1.8
VPS37C-202ENST00000535818 NBPF3Q9H094 633 aa26.27■■□□□ 1.8
VPS37C-202ENST00000535818 MYPNQ86TC9 1320 aa26.26■■□□□ 1.79
VPS37C-202ENST00000535818 SPDYE16A6NNV3 312 aaPredicted RBP26.26■■□□□ 1.79
VPS37C-202ENST00000535818 FLOT1O75955 427 aa26.26■■□□□ 1.79
VPS37C-202ENST00000535818 PRMT2P55345 433 aa26.26■■□□□ 1.79
VPS37C-202ENST00000535818 COG2Q14746 738 aa26.26■■□□□ 1.79
VPS37C-202ENST00000535818 LRRC47Q8N1G4 583 aaKnown RBP26.26■■□□□ 1.79
VPS37C-202ENST00000535818 TXNRD2Q9NNW7 524 aa26.26■■□□□ 1.79
VPS37C-202ENST00000535818 STX8Q9UNK0 236 aa26.26■■□□□ 1.79
VPS37C-202ENST00000535818 PEX10O60683 326 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 ERVK-9P63128 1117 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 ERVK-24P63145 666 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 FAM83BQ5T0W9 1011 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 CCAR1Q8IX12 1150 aaKnown RBP26.25■■□□□ 1.79
VPS37C-202ENST00000535818 COA7Q96BR5 231 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 HOXC10Q9NYD6 342 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 RBPJLQ9UBG7 517 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 SRRDQ9UH36 339 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 SYNPO2Q9UMS6 1093 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 RABGAP1Q9Y3P9 1069 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 PTCH2Q9Y6C5 1203 aa26.25■■□□□ 1.79
VPS37C-202ENST00000535818 NEDD4P46934 1319 aa26.24■■□□□ 1.79
VPS37C-202ENST00000535818 F5H6K3 240 aa26.24■■□□□ 1.79
VPS37C-202ENST00000535818 NDUFB10O96000 172 aa26.24■■□□□ 1.79
VPS37C-202ENST00000535818 PTH1RQ03431 593 aa26.24■■□□□ 1.79
VPS37C-202ENST00000535818 KLRC3Q07444 240 aa26.24■■□□□ 1.79
VPS37C-202ENST00000535818 MKL1Q969V6 931 aa26.24■■□□□ 1.79
VPS37C-202ENST00000535818 NMT2O60551 498 aa26.23■■□□□ 1.79
VPS37C-202ENST00000535818 CASC1Q6TDU7 716 aa26.23■■□□□ 1.79
VPS37C-202ENST00000535818 LBX2Q6XYB7 198 aa26.23■■□□□ 1.79
VPS37C-202ENST00000535818 KIAA1211Q6ZU35 1233 aa26.23■■□□□ 1.79
VPS37C-202ENST00000535818 ESR2Q92731 530 aa26.23■■□□□ 1.79
VPS37C-202ENST00000535818 CWC22Q9HCG8 908 aaKnown RBP26.23■■□□□ 1.79
VPS37C-202ENST00000535818 U3KPZ7 1027 aaPredicted RBP26.23■■□□□ 1.79
VPS37C-202ENST00000535818 DSG3P32926 999 aa26.22■■□□□ 1.79
VPS37C-202ENST00000535818 CCNA1P78396 465 aa26.22■■□□□ 1.79
VPS37C-202ENST00000535818 PRKCZQ05513 592 aa26.22■■□□□ 1.79
VPS37C-202ENST00000535818 GMCL1P1Q8NEA9 526 aa26.22■■□□□ 1.79
VPS37C-202ENST00000535818 RAET1EQ8TD07 263 aa26.22■■□□□ 1.79
VPS37C-202ENST00000535818 NUP88Q99567 741 aaPredicted RBP26.22■■□□□ 1.79
VPS37C-202ENST00000535818 ESYT1Q9BSJ8 1104 aa26.22■■□□□ 1.79
VPS37C-202ENST00000535818 IL17RBQ9NRM6 502 aa26.22■■□□□ 1.79
VPS37C-202ENST00000535818 ISY1Q9ULR0 285 aaKnown RBP26.22■■□□□ 1.79
VPS37C-202ENST00000535818 Q3C1V9 767 aa26.21■■□□□ 1.79
VPS37C-202ENST00000535818 POTEEQ6S8J3 1075 aa26.21■■□□□ 1.79
VPS37C-202ENST00000535818 CDC45O75419 566 aa26.2■■□□□ 1.78
VPS37C-202ENST00000535818 CNMDO75829 334 aa26.2■■□□□ 1.78
VPS37C-202ENST00000535818 MAPK4P31152 587 aa26.2■■□□□ 1.78
VPS37C-202ENST00000535818 NT5C2P49902 561 aa26.2■■□□□ 1.78
VPS37C-202ENST00000535818 SLC9C1Q4G0N8 1177 aa26.2■■□□□ 1.78
VPS37C-202ENST00000535818 SLFN13Q68D06 897 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms