RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 VCAM1P19320 739 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 CRHR2Q13324 411 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 COL9A3Q14050 684 aaPredicted RBP14.22□□□□□ -0.13
CHD4-203ENST00000535717 PPP4R3BQ5MIZ7 849 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 RCSD1Q6JBY9 416 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 RALYLQ86SE5 291 aaKnown RBP14.22□□□□□ -0.13
CHD4-203ENST00000535717 LRRC47Q8N1G4 583 aaKnown RBP14.22□□□□□ -0.13
CHD4-203ENST00000535717 NCOA7Q8NI08 942 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 KCNB2Q92953 911 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 R3HDMLQ9H3Y0 253 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 GOPCQ9HD26 462 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 TSKSQ9UJT2 592 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 STX8Q9UNK0 236 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 SLC45A1Q9Y2W3 748 aa14.22□□□□□ -0.13
CHD4-203ENST00000535717 MYH4Q9Y623 1939 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 F5H6K3 240 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 FOXN1O15353 648 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 CYP2C8P10632 490 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 HOXA7P31268 230 aaPredicted RBP14.21□□□□□ -0.13
CHD4-203ENST00000535717 KLRC3Q07444 240 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 TAF1CQ15572 869 aaPredicted RBP14.21□□□□□ -0.13
CHD4-203ENST00000535717 TSGA10IPQ3SY00 556 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 IQCA1Q86XH1 822 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 MB21D2Q8IYB1 491 aaPredicted RBP14.21□□□□□ -0.13
CHD4-203ENST00000535717 SPICE1Q8N0Z3 855 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 LPAR1Q92633 364 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 ZSCAN10Q96SZ4 725 aaPredicted RBP14.21□□□□□ -0.13
CHD4-203ENST00000535717 CFHR5Q9BXR6 569 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 SYNPO2Q9UMS6 1093 aa14.21□□□□□ -0.13
CHD4-203ENST00000535717 NDUFB10O96000 172 aa14.2□□□□□ -0.14
CHD4-203ENST00000535717 ZKSCAN1P17029 563 aaPredicted RBP14.2□□□□□ -0.14
CHD4-203ENST00000535717 ANTXR2P58335 489 aa14.2□□□□□ -0.14
CHD4-203ENST00000535717 PABPC4Q13310 644 aaKnown RBP eCLIP14.2□□□□□ -0.147e-9■□□□□ 8.1
CHD4-203ENST00000535717 ADCK5Q3MIX3 580 aa14.2□□□□□ -0.14
CHD4-203ENST00000535717 CHST3Q7LGC8 479 aa14.2□□□□□ -0.14
CHD4-203ENST00000535717 ENAHQ8N8S7 591 aaPredicted RBP14.2□□□□□ -0.14
CHD4-203ENST00000535717 GMCL1P1Q8NEA9 526 aa14.2□□□□□ -0.14
CHD4-203ENST00000535717 TTC14Q96N46 770 aa14.2□□□□□ -0.14
CHD4-203ENST00000535717 TMEM47Q9BQJ4 181 aa14.2□□□□□ -0.14
CHD4-203ENST00000535717 UBAC1Q9BSL1 405 aa14.2□□□□□ -0.14
CHD4-203ENST00000535717 ASCC2Q9H1I8 757 aaPredicted RBP14.2□□□□□ -0.14
CHD4-203ENST00000535717 RPAP3Q9H6T3 665 aaPredicted RBP14.2□□□□□ -0.14
CHD4-203ENST00000535717 ZFYVE28Q9HCC9 887 aa14.2□□□□□ -0.14
CHD4-203ENST00000535717 SNX14Q9Y5W7 946 aa14.2□□□□□ -0.14
CHD4-203ENST00000535717 TNKSO95271 1327 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 USP17L15C9J2P7 530 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 USP17L13C9JLJ4 530 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 USP17L11C9JVI0 530 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 USP17L18D6R9N7 530 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 USP17L22D6RA61 530 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 USP17L17D6RBQ6 530 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 USP17L19D6RCP7 530 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 USP17L20D6RJB6 530 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 RAD21O60216 631 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 TOP1P11387 765 aaKnown RBP14.19□□□□□ -0.14
CHD4-203ENST00000535717 OSBPP22059 807 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 USP17L24Q0WX57 530 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 SEC23AQ15436 765 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 CCDC178Q5BJE1 867 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 CATSPERGQ6ZRH7 1159 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 DGKHQ86XP1 1220 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 ANKS1AQ92625 1134 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 PARK7Q99497 189 aaKnown RBP14.19□□□□□ -0.14
CHD4-203ENST00000535717 NUP88Q99567 741 aaPredicted RBP14.19□□□□□ -0.14
CHD4-203ENST00000535717 ANP32EQ9BTT0 268 aa14.19□□□□□ -0.14
CHD4-203ENST00000535717 ADGRA2Q96PE1 1338 aa14.18□□□□□ -0.14
CHD4-203ENST00000535717 WDR46O15213 610 aaKnown RBP14.18□□□□□ -0.14
CHD4-203ENST00000535717 PRC1O43663 620 aa14.18□□□□□ -0.14
CHD4-203ENST00000535717 TLR2O60603 784 aa14.18□□□□□ -0.14
CHD4-203ENST00000535717 EIF5BO60841 1220 aaKnown RBP14.18□□□□□ -0.14
CHD4-203ENST00000535717 HSPA8P11142 646 aaKnown RBP14.18□□□□□ -0.14
CHD4-203ENST00000535717 MCM5P33992 734 aa14.18□□□□□ -0.14
CHD4-203ENST00000535717 IRX3P78415 501 aaPredicted RBP14.18□□□□□ -0.14
CHD4-203ENST00000535717 KRT32Q14532 448 aa14.18□□□□□ -0.14
CHD4-203ENST00000535717 FAM83BQ5T0W9 1011 aa14.18□□□□□ -0.14
CHD4-203ENST00000535717 SLFN13Q68D06 897 aa14.18□□□□□ -0.14
CHD4-203ENST00000535717 NEK1Q96PY6 1258 aa14.18□□□□□ -0.14
CHD4-203ENST00000535717 P2RX7Q99572 595 aaKnown RBP14.18□□□□□ -0.14
CHD4-203ENST00000535717 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
CHD4-203ENST00000535717 PNMA3Q9UL41 463 aa14.18□□□□□ -0.14
CHD4-203ENST00000535717 IFIT3O14879 490 aaKnown RBP14.17□□□□□ -0.14
CHD4-203ENST00000535717 MCCP23508 829 aa14.17□□□□□ -0.14
CHD4-203ENST00000535717 CTCFP49711 727 aaPredicted RBP14.17□□□□□ -0.14
CHD4-203ENST00000535717 RASGRP2Q7LDG7 609 aa14.17□□□□□ -0.14
CHD4-203ENST00000535717 IGDCC4Q8TDY8 1250 aa14.17□□□□□ -0.14
CHD4-203ENST00000535717 CHMP4CQ96CF2 233 aa14.17□□□□□ -0.14
CHD4-203ENST00000535717 GMCL1Q96IK5 515 aa14.17□□□□□ -0.14
CHD4-203ENST00000535717 SENP2Q9HC62 589 aa14.17□□□□□ -0.14
CHD4-203ENST00000535717 CPA4Q9UI42 421 aa14.17□□□□□ -0.14
CHD4-203ENST00000535717 GPR25O00155 361 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 LBX1P52954 281 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 HERVK_113P62684 666 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 EXOSC10Q01780 885 aaKnown RBP14.16□□□□□ -0.14
CHD4-203ENST00000535717 COG2Q14746 738 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 TMEM67Q5HYA8 995 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
CHD4-203ENST00000535717 POTEEQ6S8J3 1075 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 C17orf99Q6UX52 265 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 PNMA1Q8ND90 353 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 SMCR8Q8TEV9 937 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms